RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 MT-ATP8P03928 68 aa11.38□□□□□ -0.59
SNX9-201ENST00000392185 DCHS1Q96JQ0 3298 aa11.37□□□□□ -0.59
SNX9-201ENST00000392185 SCXQ7RTU7 201 aa11.37□□□□□ -0.59
SNX9-201ENST00000392185 LINC00337Q8N6G1 96 aa11.37□□□□□ -0.59
SNX9-201ENST00000392185 H3BQ85 93 aa11.35□□□□□ -0.59
SNX9-201ENST00000392185 NDUFC2-KCTD14E9PQ53 114 aa11.35□□□□□ -0.59
SNX9-201ENST00000392185 PLAC8L1A1L4L8 177 aa11.34□□□□□ -0.59
SNX9-201ENST00000392185 C10orf25Q5T742 122 aa11.34□□□□□ -0.59
SNX9-201ENST00000392185 NF1P21359 2839 aa11.34□□□□□ -0.59
SNX9-201ENST00000392185 NDUFS5O43920 106 aa11.33□□□□□ -0.6
SNX9-201ENST00000392185 CCKP06307 115 aa11.33□□□□□ -0.6
SNX9-201ENST00000392185 RPL28P46779 137 aaKnown RBP11.33□□□□□ -0.6
SNX9-201ENST00000392185 CELSR2Q9HCU4 2923 aa11.33□□□□□ -0.6
SNX9-201ENST00000392185 A0A1B0GX51 115 aa11.33□□□□□ -0.6
SNX9-201ENST00000392185 SDIM1Q6ZPB5 146 aa11.33□□□□□ -0.6
SNX9-201ENST00000392185 LINC00643Q86TS7 51 aa11.33□□□□□ -0.6
SNX9-201ENST00000392185 A0A087WYN8 130 aa11.33□□□□□ -0.6
SNX9-201ENST00000392185 IGLV5-45A0A087WSX0 123 aa11.32□□□□□ -0.6
SNX9-201ENST00000392185 LINC01556Q5JQF7 62 aa11.32□□□□□ -0.6
SNX9-201ENST00000392185 ZNF575Q86XF7 245 aa11.32□□□□□ -0.6
SNX9-201ENST00000392185 RELNP78509 3460 aa11.32□□□□□ -0.6
SNX9-201ENST00000392185 C3orf84H3BNL1 204 aa11.32□□□□□ -0.6
SNX9-201ENST00000392185 M0QXV9 152 aa11.32□□□□□ -0.6
SNX9-201ENST00000392185 PDE6GP18545 87 aa11.32□□□□□ -0.6
SNX9-201ENST00000392185 SOSTDC1Q6X4U4 206 aa11.31□□□□□ -0.6
SNX9-201ENST00000392185 LAMA5O15230 3695 aa11.31□□□□□ -0.6
SNX9-201ENST00000392185 MUC7Q8TAX7 377 aa11.31□□□□□ -0.6
SNX9-201ENST00000392185 K7EIL1 84 aa11.3□□□□□ -0.6
SNX9-201ENST00000392185 ASPMQ8IZT6 3477 aa11.3□□□□□ -0.6
SNX9-201ENST00000392185 B5MCH6 92 aa11.3□□□□□ -0.6
SNX9-201ENST00000392185 NHLRC4P0CG21 123 aaPredicted RBP11.29□□□□□ -0.6
SNX9-201ENST00000392185 HRNRQ86YZ3 2850 aaPredicted RBP11.29□□□□□ -0.6
SNX9-201ENST00000392185 BPY2O14599 106 aa11.28□□□□□ -0.6
SNX9-201ENST00000392185 C2orf48Q96LS8 159 aa11.28□□□□□ -0.6
SNX9-201ENST00000392185 MDFIQ99750 246 aa11.28□□□□□ -0.6
SNX9-201ENST00000392185 ENHOQ6UWT2 76 aa11.28□□□□□ -0.6
SNX9-201ENST00000392185 DMDP11532 3685 aa11.27□□□□□ -0.6
SNX9-201ENST00000392185 NDUFB1O75438 58 aa11.26□□□□□ -0.61
SNX9-201ENST00000392185 Q8N814 137 aa11.26□□□□□ -0.61
SNX9-201ENST00000392185 LINC00588Q9Y4M8 146 aa11.26□□□□□ -0.61
SNX9-201ENST00000392185 C6orf48Q9UBA6 75 aa11.26□□□□□ -0.61
SNX9-201ENST00000392185 H0Y9J4 135 aa11.26□□□□□ -0.61
SNX9-201ENST00000392185 C4orf48Q5BLP8 95 aa11.25□□□□□ -0.61
SNX9-201ENST00000392185 LINC01561Q8N1V8 128 aa11.25□□□□□ -0.61
SNX9-201ENST00000392185 H3BNG1 76 aa11.25□□□□□ -0.61
SNX9-201ENST00000392185 DHRS4-AS1Q9P1J3 65 aa11.25□□□□□ -0.61
SNX9-201ENST00000392185 DCHS2Q6V1P9 2916 aa11.24□□□□□ -0.61
SNX9-201ENST00000392185 NDUFC2O95298 119 aa11.24□□□□□ -0.61
SNX9-201ENST00000392185 NDUFV3P56181 108 aaKnown RBP11.23□□□□□ -0.61
SNX9-201ENST00000392185 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.23□□□□□ -0.61
SNX9-201ENST00000392185 C7orf33Q8WU49 177 aa11.23□□□□□ -0.61
SNX9-201ENST00000392185 UPK3BQ9BT76 320 aa11.22□□□□□ -0.61
SNX9-201ENST00000392185 XGP55808 180 aa11.22□□□□□ -0.61
SNX9-201ENST00000392185 NIPBLQ6KC79 2804 aaeCLIP11.21□□□□□ -0.618e-7■■■□□ 15.3
SNX9-201ENST00000392185 ATOX1O00244 68 aa11.21□□□□□ -0.62
SNX9-201ENST00000392185 FBN2P35556 2912 aa11.21□□□□□ -0.62
SNX9-201ENST00000392185 EIF4EBP3O60516 100 aaPredicted RBP11.2□□□□□ -0.62
SNX9-201ENST00000392185 C1orf134Q5TEV5 83 aa11.2□□□□□ -0.62
SNX9-201ENST00000392185 HRCT1Q6UXD1 115 aa11.2□□□□□ -0.62
SNX9-201ENST00000392185 IGLV5-52A0A0A0MRZ9 124 aa11.19□□□□□ -0.62
SNX9-201ENST00000392185 IGLV9-49A0A0B4J1Y8 123 aa11.19□□□□□ -0.62
SNX9-201ENST00000392185 MRPL55Q7Z7F7 128 aaKnown RBP11.19□□□□□ -0.62
SNX9-201ENST00000392185 LINC00474Q9P2X8 69 aa11.19□□□□□ -0.62
SNX9-201ENST00000392185 REG3GQ6UW15 175 aa11.17□□□□□ -0.62
SNX9-201ENST00000392185 PRLHP81277 87 aa11.17□□□□□ -0.62
SNX9-201ENST00000392185 C22orf24Q9Y442 160 aa11.17□□□□□ -0.62
SNX9-201ENST00000392185 SPINK6Q6UWN8 80 aa11.16□□□□□ -0.62
SNX9-201ENST00000392185 LINC00612Q8N6U2 182 aa11.16□□□□□ -0.62
SNX9-201ENST00000392185 LITAFQ99732 161 aa11.15□□□□□ -0.62
SNX9-201ENST00000392185 LINC00575Q6W349 94 aa11.14□□□□□ -0.63
SNX9-201ENST00000392185 FAM218AQ96MZ4 157 aa11.13□□□□□ -0.63
SNX9-201ENST00000392185 KMT2BQ9UMN6 2715 aaPredicted RBP11.13□□□□□ -0.63
SNX9-201ENST00000392185 SMCPP49901 116 aaPredicted RBP11.11□□□□□ -0.63
SNX9-201ENST00000392185 C1orf137Q5JT78 98 aa11.1□□□□□ -0.63
SNX9-201ENST00000392185 LINC00167Q96N53 147 aa11.1□□□□□ -0.63
SNX9-201ENST00000392185 SS18L2Q9UHA2 77 aa11.1□□□□□ -0.63
SNX9-201ENST00000392185 F8WDY8 70 aa11.1□□□□□ -0.63
SNX9-201ENST00000392185 DNAH10OSP0CZ25 163 aa11.09□□□□□ -0.63
SNX9-201ENST00000392185 C20orf197Q8N268 126 aa11.09□□□□□ -0.63
SNX9-201ENST00000392185 NBDYA0A0U1RRE5 68 aa11.09□□□□□ -0.63
SNX9-201ENST00000392185 CHTF8P0CG12 524 aa11.07□□□□□ -0.64
SNX9-201ENST00000392185 MP68P56378 58 aa11.07□□□□□ -0.64
SNX9-201ENST00000392185 WFDC13Q8IUB5 93 aa11.06□□□□□ -0.64
SNX9-201ENST00000392185 A0A087WVE0 104 aa11.06□□□□□ -0.64
SNX9-201ENST00000392185 Q6ZRP5 223 aa11.06□□□□□ -0.64
SNX9-201ENST00000392185 PRYO14603 147 aa11.05□□□□□ -0.64
SNX9-201ENST00000392185 PRR34Q9NV39 138 aa11.05□□□□□ -0.64
SNX9-201ENST00000392185 ATP5EP2Q5VTU8 51 aa11.05□□□□□ -0.64
SNX9-201ENST00000392185 KIAA0087Q14695 138 aa11.04□□□□□ -0.64
SNX9-201ENST00000392185 TM2D3Q9BRN9 247 aa11.04□□□□□ -0.64
SNX9-201ENST00000392185 PRO0461Q9UI25 63 aa11.04□□□□□ -0.64
SNX9-201ENST00000392185 STAB2Q8WWQ8 2551 aa11.03□□□□□ -0.64
SNX9-201ENST00000392185 C3orf22Q8N5N4 141 aa11.02□□□□□ -0.64
SNX9-201ENST00000392185 ZNF706Q9Y5V0 76 aaPredicted RBP11.02□□□□□ -0.64
SNX9-201ENST00000392185 FAM240AA0A1B0GVK7 77 aa11.02□□□□□ -0.65
SNX9-201ENST00000392185 LINC00846Q9NV44 126 aa11.02□□□□□ -0.65
SNX9-201ENST00000392185 TENM4Q6N022 2769 aa11.02□□□□□ -0.65
SNX9-201ENST00000392185 SMCR5Q8TEV8 140 aa11.02□□□□□ -0.65
SNX9-201ENST00000392185 GVQW2A0A096LPI5 108 aaPredicted RBP11.02□□□□□ -0.65
SNX9-201ENST00000392185 Q9BRP9 147 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms