RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 TRBV10-3A0A0K0K1G6 114 aa11.87□□□□□ -0.51
TRAF3IP1-202ENST00000391993 PDE6GP18545 87 aa11.87□□□□□ -0.51
TRAF3IP1-202ENST00000391993 DCHS2Q6V1P9 2916 aa11.86□□□□□ -0.51
TRAF3IP1-202ENST00000391993 PRYO14603 147 aa11.86□□□□□ -0.51
TRAF3IP1-202ENST00000391993 LINC01600Q96MT4 127 aa11.85□□□□□ -0.51
TRAF3IP1-202ENST00000391993 MUC7Q8TAX7 377 aa11.85□□□□□ -0.51
TRAF3IP1-202ENST00000391993 CELSR1Q9NYQ6 3014 aa11.84□□□□□ -0.51
TRAF3IP1-202ENST00000391993 PMAIP1Q13794 54 aa11.84□□□□□ -0.51
TRAF3IP1-202ENST00000391993 DEFB135Q30KP9 77 aa11.84□□□□□ -0.51
TRAF3IP1-202ENST00000391993 LINC00575Q6W349 94 aa11.84□□□□□ -0.51
TRAF3IP1-202ENST00000391993 C22orf24Q9Y442 160 aa11.84□□□□□ -0.51
TRAF3IP1-202ENST00000391993 ZANQ9Y493 2812 aa11.83□□□□□ -0.52
TRAF3IP1-202ENST00000391993 WIPF1O43516 503 aa11.83□□□□□ -0.52
TRAF3IP1-202ENST00000391993 ESRGQ1W209 222 aa11.83□□□□□ -0.52
TRAF3IP1-202ENST00000391993 UNC79Q9P2D8 2635 aa11.83□□□□□ -0.52
TRAF3IP1-202ENST00000391993 A0A0J9YWU9 116 aa11.82□□□□□ -0.52
TRAF3IP1-202ENST00000391993 CYSRT1A8MQ03 144 aa11.82□□□□□ -0.52
TRAF3IP1-202ENST00000391993 TEX15Q9BXT5 2789 aa11.82□□□□□ -0.52
TRAF3IP1-202ENST00000391993 Q8IZM0 81 aa11.82□□□□□ -0.52
TRAF3IP1-202ENST00000391993 SPATA3Q8NHX4 192 aa11.82□□□□□ -0.52
TRAF3IP1-202ENST00000391993 PRO0255Q9UI72 69 aa11.82□□□□□ -0.52
TRAF3IP1-202ENST00000391993 IL17DQ8TAD2 202 aa11.81□□□□□ -0.52
TRAF3IP1-202ENST00000391993 ZNF702PQ9H963 129 aa11.81□□□□□ -0.52
TRAF3IP1-202ENST00000391993 DEFB116Q30KQ4 102 aa11.81□□□□□ -0.52
TRAF3IP1-202ENST00000391993 WFDC13Q8IUB5 93 aa11.81□□□□□ -0.52
TRAF3IP1-202ENST00000391993 Q6ZQT0 140 aa11.8□□□□□ -0.52
TRAF3IP1-202ENST00000391993 MRPL55Q7Z7F7 128 aaKnown RBP11.8□□□□□ -0.52
TRAF3IP1-202ENST00000391993 ZNF73O43830 326 aaPredicted RBP11.79□□□□□ -0.52
TRAF3IP1-202ENST00000391993 IGKV2D-24A0A075B6R9 120 aa11.79□□□□□ -0.52
TRAF3IP1-202ENST00000391993 UBE2BP63146 152 aa11.79□□□□□ -0.52
TRAF3IP1-202ENST00000391993 CD164L2Q6UWJ8 174 aa11.78□□□□□ -0.52
TRAF3IP1-202ENST00000391993 WFDC10BQ8IUB3 73 aa11.78□□□□□ -0.52
TRAF3IP1-202ENST00000391993 C4orf3Q8WVX3 66 aa11.78□□□□□ -0.52
TRAF3IP1-202ENST00000391993 ATP5EP56381 51 aaPredicted RBP11.77□□□□□ -0.53
TRAF3IP1-202ENST00000391993 CHKB-CPT1BH3BT56 60 aa11.77□□□□□ -0.53
TRAF3IP1-202ENST00000391993 C10orf25Q5T742 122 aa11.77□□□□□ -0.53
TRAF3IP1-202ENST00000391993 LINC00482Q8N8I6 264 aa11.76□□□□□ -0.53
TRAF3IP1-202ENST00000391993 CMC4P56277 68 aaPredicted RBP11.75□□□□□ -0.53
TRAF3IP1-202ENST00000391993 CRYBG3Q68DQ2 2970 aa11.75□□□□□ -0.53
TRAF3IP1-202ENST00000391993 MP68P56378 58 aa11.74□□□□□ -0.53
TRAF3IP1-202ENST00000391993 DSCR9P59020 149 aa11.74□□□□□ -0.53
TRAF3IP1-202ENST00000391993 ETDCA0A1B0GVM5 59 aa11.74□□□□□ -0.53
TRAF3IP1-202ENST00000391993 A0A096LNI7 61 aa11.73□□□□□ -0.53
TRAF3IP1-202ENST00000391993 LYPD5Q6UWN5 251 aa11.73□□□□□ -0.53
TRAF3IP1-202ENST00000391993 FP248Q71RG6 208 aaPredicted RBP11.72□□□□□ -0.53
TRAF3IP1-202ENST00000391993 FBN2P35556 2912 aa11.72□□□□□ -0.53
TRAF3IP1-202ENST00000391993 SMIM29Q86T20 159 aa11.71□□□□□ -0.53
TRAF3IP1-202ENST00000391993 RPL37AP8A6NKH3 93 aa11.71□□□□□ -0.54
TRAF3IP1-202ENST00000391993 KLKP1Q107X0 134 aa11.71□□□□□ -0.54
TRAF3IP1-202ENST00000391993 Q6YL49 198 aa11.7□□□□□ -0.54
TRAF3IP1-202ENST00000391993 KLK9Q2XQG4 91 aa11.69□□□□□ -0.54
TRAF3IP1-202ENST00000391993 FLNAP21333 2647 aaKnown RBP11.69□□□□□ -0.54
TRAF3IP1-202ENST00000391993 A6NED7 52 aa11.69□□□□□ -0.54
TRAF3IP1-202ENST00000391993 FLNCQ14315 2725 aa11.69□□□□□ -0.54
TRAF3IP1-202ENST00000391993 CXCL6P80162 114 aa11.68□□□□□ -0.54
TRAF3IP1-202ENST00000391993 DNAJC9-AS1A6NH13 148 aa11.68□□□□□ -0.54
TRAF3IP1-202ENST00000391993 NF1P21359 2839 aa11.67□□□□□ -0.54
TRAF3IP1-202ENST00000391993 FAM229BQ4G0N7 80 aa11.66□□□□□ -0.54
TRAF3IP1-202ENST00000391993 LINC00208Q96KT6 92 aa11.66□□□□□ -0.54
TRAF3IP1-202ENST00000391993 COX17Q14061 63 aa11.65□□□□□ -0.54
TRAF3IP1-202ENST00000391993 HRNRQ86YZ3 2850 aaPredicted RBP11.64□□□□□ -0.55
TRAF3IP1-202ENST00000391993 A0A096LNT2 108 aa11.63□□□□□ -0.55
TRAF3IP1-202ENST00000391993 PRR15LQ9BU68 103 aa11.63□□□□□ -0.55
TRAF3IP1-202ENST00000391993 NDUFS5O43920 106 aa11.63□□□□□ -0.55
TRAF3IP1-202ENST00000391993 OBSCN-AS1Q96MR7 158 aa11.62□□□□□ -0.55
TRAF3IP1-202ENST00000391993 APCP25054 2843 aa11.62□□□□□ -0.55
TRAF3IP1-202ENST00000391993 ATRQ13535 2644 aa11.62□□□□□ -0.55
TRAF3IP1-202ENST00000391993 CFAP46Q8IYW2 2715 aa11.61□□□□□ -0.55
TRAF3IP1-202ENST00000391993 F8WDY8 70 aa11.61□□□□□ -0.55
TRAF3IP1-202ENST00000391993 A8MUN3 132 aa11.6□□□□□ -0.55
TRAF3IP1-202ENST00000391993 H3BQ85 93 aa11.6□□□□□ -0.55
TRAF3IP1-202ENST00000391993 FASNP49327 2511 aaKnown RBP11.58□□□□□ -0.56
TRAF3IP1-202ENST00000391993 LY6G6DO95868 133 aa11.58□□□□□ -0.56
TRAF3IP1-202ENST00000391993 UTP20O75691 2785 aaKnown RBP11.58□□□□□ -0.56
TRAF3IP1-202ENST00000391993 ITPR3Q14573 2671 aa11.57□□□□□ -0.56
TRAF3IP1-202ENST00000391993 LOC110117498A0A087WWA1 95 aa11.57□□□□□ -0.56
TRAF3IP1-202ENST00000391993 H0Y9J4 135 aa11.57□□□□□ -0.56
TRAF3IP1-202ENST00000391993 C1orf137Q5JT78 98 aa11.57□□□□□ -0.56
TRAF3IP1-202ENST00000391993 BAHCC1Q9P281 2608 aa11.56□□□□□ -0.56
TRAF3IP1-202ENST00000391993 CELSR2Q9HCU4 2923 aa11.56□□□□□ -0.56
TRAF3IP1-202ENST00000391993 IGHV4-31P0DP07 118 aa11.56□□□□□ -0.56
TRAF3IP1-202ENST00000391993 M0R378 163 aa11.55□□□□□ -0.56
TRAF3IP1-202ENST00000391993 SPART-AS1P0CW21 52 aa11.55□□□□□ -0.56
TRAF3IP1-202ENST00000391993 NOTCH1P46531 2555 aa11.54□□□□□ -0.56
TRAF3IP1-202ENST00000391993 PLAC8L1A1L4L8 177 aa11.54□□□□□ -0.56
TRAF3IP1-202ENST00000391993 IGKV2-24A0A0C4DH68 120 aa11.53□□□□□ -0.56
TRAF3IP1-202ENST00000391993 KIAA0087Q14695 138 aa11.53□□□□□ -0.56
TRAF3IP1-202ENST00000391993 C1orf64Q8NEQ6 169 aa11.53□□□□□ -0.56
TRAF3IP1-202ENST00000391993 A0A1B0GUV1 79 aa11.52□□□□□ -0.56
TRAF3IP1-202ENST00000391993 BCE1O60756 84 aa11.52□□□□□ -0.56
TRAF3IP1-202ENST00000391993 KPRPQ5T749 579 aaPredicted RBP11.51□□□□□ -0.57
TRAF3IP1-202ENST00000391993 Q8NDZ9 215 aa11.5□□□□□ -0.57
TRAF3IP1-202ENST00000391993 C6orf48Q9UBA6 75 aa11.5□□□□□ -0.57
TRAF3IP1-202ENST00000391993 TRBV7-4A0A0J9YYF1 115 aa11.5□□□□□ -0.57
TRAF3IP1-202ENST00000391993 A0A0G2JQZ4 141 aa11.49□□□□□ -0.57
TRAF3IP1-202ENST00000391993 A0A1W2PNN7 141 aa11.49□□□□□ -0.57
TRAF3IP1-202ENST00000391993 PCOTHQ58A44 107 aa11.49□□□□□ -0.57
TRAF3IP1-202ENST00000391993 Q6ZRU5 148 aa11.49□□□□□ -0.57
TRAF3IP1-202ENST00000391993 APOC4P55056 127 aa11.48□□□□□ -0.57
TRAF3IP1-202ENST00000391993 UBR5O95071 2799 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms