RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 CXCL5P42830 114 aa6.79□□□□□ -1.32
SOD1-202ENST00000389995 RPL28P46779 137 aaKnown RBP6.79□□□□□ -1.32
SOD1-202ENST00000389995 RAB5BP61020 215 aa6.79□□□□□ -1.32
SOD1-202ENST00000389995 PMCHL1Q16048 86 aa6.79□□□□□ -1.32
SOD1-202ENST00000389995 COX7B2Q8TF08 81 aa6.79□□□□□ -1.32
SOD1-202ENST00000389995 XAGE1AQ9HD64 81 aa6.79□□□□□ -1.32
SOD1-202ENST00000389995 IGLV5-45A0A087WSX0 123 aa6.78□□□□□ -1.32
SOD1-202ENST00000389995 H3BRM9 83 aa6.78□□□□□ -1.32
SOD1-202ENST00000389995 BCE1O60756 84 aa6.78□□□□□ -1.32
SOD1-202ENST00000389995 PDZD11Q5EBL8 140 aa6.78□□□□□ -1.32
SOD1-202ENST00000389995 URB1-AS1Q96HZ7 61 aa6.78□□□□□ -1.32
SOD1-202ENST00000389995 PPDPFQ9H3Y8 114 aa6.78□□□□□ -1.32
SOD1-202ENST00000389995 A0A096LNJ9 63 aa6.77□□□□□ -1.33
SOD1-202ENST00000389995 C5orf52A6NGY3 159 aa6.77□□□□□ -1.33
SOD1-202ENST00000389995 RPL37AP8A6NKH3 93 aa6.77□□□□□ -1.33
SOD1-202ENST00000389995 KRTAP4-8Q9BYQ9 185 aa6.77□□□□□ -1.33
SOD1-202ENST00000389995 ATP5LO75964 103 aa6.76□□□□□ -1.33
SOD1-202ENST00000389995 CBLN2Q8IUK8 224 aa6.76□□□□□ -1.33
SOD1-202ENST00000389995 IGLC3P0DOY3 106 aa6.75□□□□□ -1.33
SOD1-202ENST00000389995 LBHQ53QV2 105 aaPredicted RBP6.75□□□□□ -1.33
SOD1-202ENST00000389995 MRPL55Q7Z7F7 128 aaKnown RBP6.75□□□□□ -1.33
SOD1-202ENST00000389995 YPEL4Q96NS1 127 aa6.75□□□□□ -1.33
SOD1-202ENST00000389995 A0A0A0MQY5 61 aa6.74□□□□□ -1.33
SOD1-202ENST00000389995 BAGE3Q86Y29 109 aa6.74□□□□□ -1.33
SOD1-202ENST00000389995 ZNF22P17026 224 aaPredicted RBP6.73□□□□□ -1.33
SOD1-202ENST00000389995 TMEM170BQ5T4T1 132 aa6.73□□□□□ -1.33
SOD1-202ENST00000389995 SLC7A5P1Q8MH63 180 aa6.73□□□□□ -1.33
SOD1-202ENST00000389995 CHCHD1Q96BP2 118 aaKnown RBP6.73□□□□□ -1.33
SOD1-202ENST00000389995 LINC00167Q96N53 147 aa6.73□□□□□ -1.33
SOD1-202ENST00000389995 IGKV2D-26A0A0A0MRZ7 120 aa6.72□□□□□ -1.33
SOD1-202ENST00000389995 C11orf86A6NJI1 115 aa6.71□□□□□ -1.34
SOD1-202ENST00000389995 ASB16-AS1Q495Z4 193 aa6.71□□□□□ -1.34
SOD1-202ENST00000389995 FAM229BQ4G0N7 80 aa6.71□□□□□ -1.34
SOD1-202ENST00000389995 KRTAP13-1Q8IUC0 172 aa6.71□□□□□ -1.34
SOD1-202ENST00000389995 CHTOPQ9Y3Y2 248 aaKnown RBP6.71□□□□□ -1.34
SOD1-202ENST00000389995 IGLV5-39A0A0G2JS06 123 aa6.7□□□□□ -1.34
SOD1-202ENST00000389995 HSBP1O75506 76 aa6.7□□□□□ -1.34
SOD1-202ENST00000389995 TRGC2P03986 189 aa6.7□□□□□ -1.34
SOD1-202ENST00000389995 PFN2P35080 140 aa6.7□□□□□ -1.34
SOD1-202ENST00000389995 UBE2AP49459 152 aa6.7□□□□□ -1.34
SOD1-202ENST00000389995 C3orf22Q8N5N4 141 aa6.7□□□□□ -1.34
SOD1-202ENST00000389995 LINC00337Q8N6G1 96 aa6.7□□□□□ -1.34
SOD1-202ENST00000389995 IFI27L1Q96BM0 104 aa6.7□□□□□ -1.34
SOD1-202ENST00000389995 TP73-AS1Q9UF72 201 aa6.7□□□□□ -1.34
SOD1-202ENST00000389995 KRTAP13-3Q3SY46 172 aa6.69□□□□□ -1.34
SOD1-202ENST00000389995 FAM19A2Q8N3H0 131 aa6.69□□□□□ -1.34
SOD1-202ENST00000389995 TRAV12-1A0A0B4J245 112 aa6.68□□□□□ -1.34
SOD1-202ENST00000389995 SCO1O75880 301 aa6.68□□□□□ -1.34
SOD1-202ENST00000389995 PRLHP81277 87 aa6.68□□□□□ -1.34
SOD1-202ENST00000389995 NKAPP1Q8N9T2 125 aa6.68□□□□□ -1.34
SOD1-202ENST00000389995 ZNF625Q96I27 306 aaPredicted RBP6.68□□□□□ -1.34
SOD1-202ENST00000389995 H0Y8G0 127 aa6.67□□□□□ -1.34
SOD1-202ENST00000389995 ERG28Q9UKR5 140 aa6.67□□□□□ -1.34
SOD1-202ENST00000389995 SFTA2Q6UW10 78 aa6.66□□□□□ -1.34
SOD1-202ENST00000389995 IGKV2-28A0A075B6P5 120 aa6.65□□□□□ -1.34
SOD1-202ENST00000389995 TMEM223A0PJW6 202 aa6.65□□□□□ -1.34
SOD1-202ENST00000389995 SERF1AO75920 110 aa6.65□□□□□ -1.34
SOD1-202ENST00000389995 LEPROTL1O95214 131 aa6.65□□□□□ -1.34
SOD1-202ENST00000389995 IGKV2D-28P01615 120 aa6.65□□□□□ -1.34
SOD1-202ENST00000389995 COX17Q14061 63 aa6.65□□□□□ -1.34
SOD1-202ENST00000389995 IGLV5-37A0A075B6J1 123 aa6.64□□□□□ -1.35
SOD1-202ENST00000389995 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.64□□□□□ -1.35
SOD1-202ENST00000389995 SND1-IT1Q9HBX3 110 aa6.64□□□□□ -1.35
SOD1-202ENST00000389995 COLCA2A8K830 154 aa6.63□□□□□ -1.35
SOD1-202ENST00000389995 LINC00158P58513 81 aa6.63□□□□□ -1.35
SOD1-202ENST00000389995 SEC61BP60468 96 aaKnown RBP6.63□□□□□ -1.35
SOD1-202ENST00000389995 FP248Q71RG6 208 aaPredicted RBP6.63□□□□□ -1.35
SOD1-202ENST00000389995 A0A0U1RRA0 63 aa6.62□□□□□ -1.35
SOD1-202ENST00000389995 TMEM238C9JI98 176 aa6.62□□□□□ -1.35
SOD1-202ENST00000389995 ATP6V1G1O75348 118 aa6.62□□□□□ -1.35
SOD1-202ENST00000389995 FABP4P15090 132 aa6.62□□□□□ -1.35
SOD1-202ENST00000389995 MT1HP80294 61 aa6.62□□□□□ -1.35
SOD1-202ENST00000389995 RPL24P83731 157 aaKnown RBP6.62□□□□□ -1.35
SOD1-202ENST00000389995 FAM19A1Q7Z5A9 133 aa6.62□□□□□ -1.35
SOD1-202ENST00000389995 HSPB8Q9UJY1 196 aa6.62□□□□□ -1.35
SOD1-202ENST00000389995 LINC00310P59036 64 aa6.61□□□□□ -1.35
SOD1-202ENST00000389995 CTAG1AP78358 180 aa6.61□□□□□ -1.35
SOD1-202ENST00000389995 KRTAP19-2Q3LHN2 52 aa6.61□□□□□ -1.35
SOD1-202ENST00000389995 MEIG1Q5JSS6 88 aa6.61□□□□□ -1.35
SOD1-202ENST00000389995 DAND5Q8N907 189 aa6.61□□□□□ -1.35
SOD1-202ENST00000389995 PLEKHB2Q96CS7 222 aa6.61□□□□□ -1.35
SOD1-202ENST00000389995 SMIM13P0DJ93 91 aa6.59□□□□□ -1.35
SOD1-202ENST00000389995 PLNP26678 52 aa6.59□□□□□ -1.35
SOD1-202ENST00000389995 SNRPEP62304 92 aaKnown RBP6.59□□□□□ -1.35
SOD1-202ENST00000389995 HERV-K104P63124 156 aa6.59□□□□□ -1.35
SOD1-202ENST00000389995 SPAG11AQ6PDA7 123 aa6.59□□□□□ -1.35
SOD1-202ENST00000389995 NDUFA12Q9UI09 145 aa6.59□□□□□ -1.35
SOD1-202ENST00000389995 MYMXA0A1B0GTQ4 84 aa6.58□□□□□ -1.36
SOD1-202ENST00000389995 DPM2O94777 84 aa6.58□□□□□ -1.36
SOD1-202ENST00000389995 Q8NBF4 154 aa6.58□□□□□ -1.36
SOD1-202ENST00000389995 PMCHL2Q9BQD1 86 aa6.58□□□□□ -1.36
SOD1-202ENST00000389995 TMEM126AQ9H061 195 aa6.58□□□□□ -1.36
SOD1-202ENST00000389995 LINC00587B1AMM8 73 aa6.57□□□□□ -1.36
SOD1-202ENST00000389995 HERVK_113P61574 105 aa6.57□□□□□ -1.36
SOD1-202ENST00000389995 MIR7-3HGQ8N6C7 128 aa6.57□□□□□ -1.36
SOD1-202ENST00000389995 Q8NDZ9 215 aa6.57□□□□□ -1.36
SOD1-202ENST00000389995 MAP1LC3CQ9BXW4 147 aa6.57□□□□□ -1.36
SOD1-202ENST00000389995 M0R378 163 aa6.56□□□□□ -1.36
SOD1-202ENST00000389995 LEPROTO15243 131 aa6.56□□□□□ -1.36
SOD1-202ENST00000389995 IGKCP01834 107 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms