RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 NAA38Q9BRA0 125 aaKnown RBP17.39■□□□□ 0.37
MSX1-201ENST00000382723 PRO1854Q9UHT4 67 aa17.39■□□□□ 0.37
MSX1-201ENST00000382723 DNAH2Q9P225 4427 aa17.39■□□□□ 0.37
MSX1-201ENST00000382723 Q8N814 137 aa17.39■□□□□ 0.37
MSX1-201ENST00000382723 H7C2G1 150 aa17.36■□□□□ 0.37
MSX1-201ENST00000382723 PGPEP1Q9NXJ5 209 aa17.36■□□□□ 0.37
MSX1-201ENST00000382723 IGKV2-28A0A075B6P5 120 aa17.35■□□□□ 0.37
MSX1-201ENST00000382723 IGKV2D-28P01615 120 aa17.35■□□□□ 0.37
MSX1-201ENST00000382723 TLX1NBP0CAT3 122 aa17.35■□□□□ 0.37
MSX1-201ENST00000382723 Q8NDZ9 215 aa17.35■□□□□ 0.37
MSX1-201ENST00000382723 PRR3P79522 188 aaKnown RBP17.35■□□□□ 0.37
MSX1-201ENST00000382723 H3BUT2 72 aa17.34■□□□□ 0.37
MSX1-201ENST00000382723 LOC107984640A0A0U1RRK4 108 aa17.32■□□□□ 0.36
MSX1-201ENST00000382723 TSPAN13O95857 204 aa17.32■□□□□ 0.36
MSX1-201ENST00000382723 GAGE2BQ13066 116 aa17.32■□□□□ 0.36
MSX1-201ENST00000382723 LCE6AA0A183 80 aa17.31■□□□□ 0.36
MSX1-201ENST00000382723 RPL13AP40429 203 aaKnown RBP17.31■□□□□ 0.36
MSX1-201ENST00000382723 HYDINQ4G0P3 5121 aa17.31■□□□□ 0.36
MSX1-201ENST00000382723 LINC00337Q8N6G1 96 aa17.31■□□□□ 0.36
MSX1-201ENST00000382723 NDUFC2O95298 119 aa17.3■□□□□ 0.36
MSX1-201ENST00000382723 C9orf129Q5T035 196 aaKnown RBP17.3■□□□□ 0.36
MSX1-201ENST00000382723 Q1RN00 199 aa17.29■□□□□ 0.36
MSX1-201ENST00000382723 NCR3O14931 201 aa17.29■□□□□ 0.36
MSX1-201ENST00000382723 RTL8CO15255 209 aa17.29■□□□□ 0.36
MSX1-201ENST00000382723 TNP2Q05952 138 aa17.29■□□□□ 0.36
MSX1-201ENST00000382723 LINC01620Q4KN68 170 aa17.28■□□□□ 0.36
MSX1-201ENST00000382723 TRAV13-2A0A0B4J235 113 aa17.27■□□□□ 0.36
MSX1-201ENST00000382723 FUSP35637 526 aaKnown RBP eCLIP17.27■□□□□ 0.36
MSX1-201ENST00000382723 A0A1W2PPM0 123 aa17.27■□□□□ 0.35
MSX1-201ENST00000382723 C9orf163Q8N9P6 203 aa17.26■□□□□ 0.35
MSX1-201ENST00000382723 OR13C6PQ8NH95 151 aa17.26■□□□□ 0.35
MSX1-201ENST00000382723 A0A096LNI7 61 aa17.22■□□□□ 0.35
MSX1-201ENST00000382723 GAGE10A6NGK3 116 aa17.22■□□□□ 0.35
MSX1-201ENST00000382723 K7EP34 96 aa17.22■□□□□ 0.35
MSX1-201ENST00000382723 VPREB1P12018 145 aa17.22■□□□□ 0.35
MSX1-201ENST00000382723 IGKV2-24A0A0C4DH68 120 aa17.21■□□□□ 0.35
MSX1-201ENST00000382723 PSMB2P49721 201 aa17.21■□□□□ 0.35
MSX1-201ENST00000382723 FAM168BA1KXE4 195 aa17.19■□□□□ 0.34
MSX1-201ENST00000382723 C16orf90A8MZG2 172 aa17.19■□□□□ 0.34
MSX1-201ENST00000382723 SERTAD4-AS1Q5TG53 156 aa17.19■□□□□ 0.34
MSX1-201ENST00000382723 CBY1Q9Y3M2 126 aa17.19■□□□□ 0.34
MSX1-201ENST00000382723 GTF2H5Q6ZYL4 71 aa17.19■□□□□ 0.34
MSX1-201ENST00000382723 SACSQ9NZJ4 4579 aa17.19■□□□□ 0.34
MSX1-201ENST00000382723 FRAS1Q86XX4 4008 aa17.19■□□□□ 0.34
MSX1-201ENST00000382723 DNAH17Q9UFH2 4485 aa17.18■□□□□ 0.34
MSX1-201ENST00000382723 FABP2P12104 132 aa17.18■□□□□ 0.34
MSX1-201ENST00000382723 S100A7L2Q5SY68 101 aa17.17■□□□□ 0.34
MSX1-201ENST00000382723 SPCS1Q9Y6A9 102 aa17.17■□□□□ 0.34
MSX1-201ENST00000382723 SDIM1Q6ZPB5 146 aa17.16■□□□□ 0.34
MSX1-201ENST00000382723 TRBV10-2A0A0K0K1G8 114 aa17.15■□□□□ 0.34
MSX1-201ENST00000382723 TRIAP1O43715 76 aa17.15■□□□□ 0.34
MSX1-201ENST00000382723 IGLV5-52A0A0A0MRZ9 124 aa17.15■□□□□ 0.34
MSX1-201ENST00000382723 CHTF8P0CG12 524 aa17.15■□□□□ 0.34
MSX1-201ENST00000382723 SCGB1C2P0DMR2 95 aa17.14■□□□□ 0.33
MSX1-201ENST00000382723 NKAPP1Q8N9T2 125 aa17.14■□□□□ 0.33
MSX1-201ENST00000382723 TMEM126AQ9H061 195 aa17.14■□□□□ 0.33
MSX1-201ENST00000382723 FAM19A5Q7Z5A7 132 aaPredicted RBP17.13■□□□□ 0.33
MSX1-201ENST00000382723 SMIM11BQ8TCY0 68 aa17.13■□□□□ 0.33
MSX1-201ENST00000382723 PKIGQ9Y2B9 76 aa17.13■□□□□ 0.33
MSX1-201ENST00000382723 PLA2G2DQ9UNK4 145 aa17.13■□□□□ 0.33
MSX1-201ENST00000382723 M0R378 163 aa17.12■□□□□ 0.33
MSX1-201ENST00000382723 HECTD4Q9Y4D8 3996 aa17.11■□□□□ 0.33
MSX1-201ENST00000382723 KRTAP7-1Q8IUC3 87 aa17.11■□□□□ 0.33
MSX1-201ENST00000382723 TRBV10-3A0A0K0K1G6 114 aa17.1■□□□□ 0.33
MSX1-201ENST00000382723 IGLV6-57P01721 117 aa17.09■□□□□ 0.33
MSX1-201ENST00000382723 RPL28P46779 137 aaKnown RBP17.08■□□□□ 0.33
MSX1-201ENST00000382723 KRTAP10-2P60368 255 aa17.08■□□□□ 0.32
MSX1-201ENST00000382723 A0A1W2PNN7 141 aa17.07■□□□□ 0.32
MSX1-201ENST00000382723 COX6CP09669 75 aa17.06■□□□□ 0.32
MSX1-201ENST00000382723 LYRM7Q5U5X0 104 aa17.06■□□□□ 0.32
MSX1-201ENST00000382723 C22orf24Q9Y442 160 aa17.06■□□□□ 0.32
MSX1-201ENST00000382723 IGLV5-37A0A075B6J1 123 aa17.06■□□□□ 0.32
MSX1-201ENST00000382723 PANO1I0J062 215 aa17.06■□□□□ 0.32
MSX1-201ENST00000382723 C7orf33Q8WU49 177 aa17.06■□□□□ 0.32
MSX1-201ENST00000382723 LINC00474Q9P2X8 69 aa17.04■□□□□ 0.32
MSX1-201ENST00000382723 DPH3Q96FX2 82 aa17.04■□□□□ 0.32
MSX1-201ENST00000382723 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP17.02■□□□□ 0.32
MSX1-201ENST00000382723 TCL1BO95988 128 aa17.02■□□□□ 0.31
MSX1-201ENST00000382723 FAT2Q9NYQ8 4349 aa17.01■□□□□ 0.31
MSX1-201ENST00000382723 MRPL55Q7Z7F7 128 aaKnown RBP17.01■□□□□ 0.31
MSX1-201ENST00000382723 CLEC2BQ92478 149 aa17.01■□□□□ 0.31
MSX1-201ENST00000382723 TRAV23DV6A0A075B6W5 121 aa17■□□□□ 0.31
MSX1-201ENST00000382723 RPL37AP8A6NKH3 93 aa17■□□□□ 0.31
MSX1-201ENST00000382723 M0QXV9 152 aa17■□□□□ 0.31
MSX1-201ENST00000382723 LINC00167Q96N53 147 aa17■□□□□ 0.31
MSX1-201ENST00000382723 KMT2CQ8NEZ4 4911 aaKnown RBP16.99■□□□□ 0.31
MSX1-201ENST00000382723 SPACA4Q8TDM5 124 aa16.99■□□□□ 0.31
MSX1-201ENST00000382723 C6orf99Q4VX62 202 aa16.98■□□□□ 0.31
MSX1-201ENST00000382723 DNAH11Q96DT5 4516 aa16.97■□□□□ 0.31
MSX1-201ENST00000382723 RYR2Q92736 4967 aa16.96■□□□□ 0.31
MSX1-201ENST00000382723 TRBV20-1A0A075B6N2 111 aa16.96■□□□□ 0.31
MSX1-201ENST00000382723 H3BMG7 143 aa16.96■□□□□ 0.31
MSX1-201ENST00000382723 LINC00336Q6ZUF6 198 aa16.95■□□□□ 0.3
MSX1-201ENST00000382723 ZNF73O43830 326 aaPredicted RBP16.94■□□□□ 0.3
MSX1-201ENST00000382723 OCIAD2Q56VL3 154 aa16.94■□□□□ 0.3
MSX1-201ENST00000382723 IGLV1-50A0A075B6I6 118 aa16.93■□□□□ 0.3
MSX1-201ENST00000382723 ATXN8Q156A1 80 aa16.92■□□□□ 0.3
MSX1-201ENST00000382723 PHF5AQ7RTV0 110 aaKnown RBP16.92■□□□□ 0.3
MSX1-201ENST00000382723 DIRC1Q969H9 104 aa16.92■□□□□ 0.3
MSX1-201ENST00000382723 FAM218AQ96MZ4 157 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms