RNA–Protein interactions for RNA: ENST00000382096.5

VLDLR-201, Transcript of very low density lipoprotein receptor, humanhuman

TSL 5

Gene VLDLR, Length 736 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-201ENST00000382096 PMCHL1Q16048 86 aa13.21□□□□□ -0.29
VLDLR-201ENST00000382096 RPL24P83731 157 aaKnown RBP13.2□□□□□ -0.3
VLDLR-201ENST00000382096 TMEM126AQ9H061 195 aa13.2□□□□□ -0.3
VLDLR-201ENST00000382096 BAGE3Q86Y29 109 aa13.19□□□□□ -0.3
VLDLR-201ENST00000382096 ZNF625Q96I27 306 aaPredicted RBP13.19□□□□□ -0.3
VLDLR-201ENST00000382096 Q8NDZ9 215 aa13.18□□□□□ -0.3
VLDLR-201ENST00000382096 TMEM238C9JI98 176 aa13.16□□□□□ -0.3
VLDLR-201ENST00000382096 M0R378 163 aa13.16□□□□□ -0.3
VLDLR-201ENST00000382096 PRLHP81277 87 aa13.16□□□□□ -0.3
VLDLR-201ENST00000382096 TMEM170BQ5T4T1 132 aa13.16□□□□□ -0.3
VLDLR-201ENST00000382096 COLCA2A8K830 154 aa13.15□□□□□ -0.3
VLDLR-201ENST00000382096 FAM19A1Q7Z5A9 133 aa13.15□□□□□ -0.3
VLDLR-201ENST00000382096 RETNLBQ9BQ08 111 aa13.15□□□□□ -0.3
VLDLR-201ENST00000382096 MUC17Q685J3 4493 aa13.15□□□□□ -0.3
VLDLR-201ENST00000382096 TRGC2P03986 189 aa13.14□□□□□ -0.31
VLDLR-201ENST00000382096 TPRXLQ17RH7 258 aa13.14□□□□□ -0.31
VLDLR-201ENST00000382096 CHTOPQ9Y3Y2 248 aaKnown RBP13.13□□□□□ -0.31
VLDLR-201ENST00000382096 CTAG1AP78358 180 aa13.12□□□□□ -0.31
VLDLR-201ENST00000382096 LINC00304Q8N9R0 145 aa13.12□□□□□ -0.31
VLDLR-201ENST00000382096 CHCHD1Q96BP2 118 aaKnown RBP13.12□□□□□ -0.31
VLDLR-201ENST00000382096 TRAV12-1A0A0B4J245 112 aa13.11□□□□□ -0.31
VLDLR-201ENST00000382096 LINC00310P59036 64 aa13.11□□□□□ -0.31
VLDLR-201ENST00000382096 IGKV2D-26A0A0A0MRZ7 120 aa13.1□□□□□ -0.31
VLDLR-201ENST00000382096 TMEM223A0PJW6 202 aa13.1□□□□□ -0.31
VLDLR-201ENST00000382096 PLEKHB2Q96CS7 222 aa13.1□□□□□ -0.31
VLDLR-201ENST00000382096 CDIP1Q9H305 208 aa13.1□□□□□ -0.31
VLDLR-201ENST00000382096 LINC00158P58513 81 aa13.07□□□□□ -0.32
VLDLR-201ENST00000382096 IFI27L1Q96BM0 104 aa13.07□□□□□ -0.32
VLDLR-201ENST00000382096 FAM19A2Q8N3H0 131 aa13.06□□□□□ -0.32
VLDLR-201ENST00000382096 IGLV7-46A0A075B6I9 117 aa13.04□□□□□ -0.32
VLDLR-201ENST00000382096 SERF1AO75920 110 aa13.02□□□□□ -0.33
VLDLR-201ENST00000382096 HIGD2AQ9BW72 106 aa13.02□□□□□ -0.33
VLDLR-201ENST00000382096 A0A0U1RRA0 63 aa13.01□□□□□ -0.33
VLDLR-201ENST00000382096 SMIM13P0DJ93 91 aa13.01□□□□□ -0.33
VLDLR-201ENST00000382096 C3orf22Q8N5N4 141 aa13.01□□□□□ -0.33
VLDLR-201ENST00000382096 SPRR4Q96PI1 79 aa13.01□□□□□ -0.33
VLDLR-201ENST00000382096 HSBP1O75506 76 aa13□□□□□ -0.33
VLDLR-201ENST00000382096 PRYO14603 147 aa12.99□□□□□ -0.33
VLDLR-201ENST00000382096 SPRR1AP35321 89 aa12.99□□□□□ -0.33
VLDLR-201ENST00000382096 HERV-K104P63124 156 aa12.99□□□□□ -0.33
VLDLR-201ENST00000382096 BOD1L2Q8IYS8 172 aa12.98□□□□□ -0.33
VLDLR-201ENST00000382096 KCNQ1DNQ9H478 68 aa12.98□□□□□ -0.33
VLDLR-201ENST00000382096 MIR7-3HGQ8N6C7 128 aa12.97□□□□□ -0.33
VLDLR-201ENST00000382096 LINC00337Q8N6G1 96 aa12.97□□□□□ -0.33
VLDLR-201ENST00000382096 LINC00587B1AMM8 73 aa12.96□□□□□ -0.33
VLDLR-201ENST00000382096 ATP6V1G1O75348 118 aa12.96□□□□□ -0.33
VLDLR-201ENST00000382096 MEIG1Q5JSS6 88 aa12.96□□□□□ -0.33
VLDLR-201ENST00000382096 ZNF706Q9Y5V0 76 aaPredicted RBP12.96□□□□□ -0.33
VLDLR-201ENST00000382096 KRTAP4-16G5E9R7 235 aaPredicted RBP12.95□□□□□ -0.34
VLDLR-201ENST00000382096 SPAG11AQ6PDA7 123 aa12.95□□□□□ -0.34
VLDLR-201ENST00000382096 PPDPFQ9H3Y8 114 aa12.95□□□□□ -0.34
VLDLR-201ENST00000382096 NDUFA12Q9UI09 145 aa12.95□□□□□ -0.34
VLDLR-201ENST00000382096 NCR3O14931 201 aa12.93□□□□□ -0.34
VLDLR-201ENST00000382096 MYMXA0A1B0GTQ4 84 aa12.92□□□□□ -0.34
VLDLR-201ENST00000382096 LEPROTL1O95214 131 aa12.92□□□□□ -0.34
VLDLR-201ENST00000382096 HIST1H2BKO60814 126 aa12.91□□□□□ -0.34
VLDLR-201ENST00000382096 HIST1H2BJP06899 126 aa12.91□□□□□ -0.34
VLDLR-201ENST00000382096 HIST1H2BOP23527 126 aa12.91□□□□□ -0.34
VLDLR-201ENST00000382096 HIST1H2BBP33778 126 aa12.91□□□□□ -0.34
VLDLR-201ENST00000382096 HIST1H2BDP58876 126 aa12.91□□□□□ -0.34
VLDLR-201ENST00000382096 HIST1H2BCP62807 126 aa12.91□□□□□ -0.34
VLDLR-201ENST00000382096 HIST2H2BEQ16778 126 aa12.91□□□□□ -0.34
VLDLR-201ENST00000382096 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.91□□□□□ -0.34
VLDLR-201ENST00000382096 HIST1H2BHQ93079 126 aa12.91□□□□□ -0.34
VLDLR-201ENST00000382096 HIST1H2BNQ99877 126 aa12.91□□□□□ -0.34
VLDLR-201ENST00000382096 HIST1H2BMQ99879 126 aa12.91□□□□□ -0.34
VLDLR-201ENST00000382096 LOC107984156A0A0G2JMH3 177 aa12.9□□□□□ -0.34
VLDLR-201ENST00000382096 ARL17AQ8IVW1 177 aa12.9□□□□□ -0.34
VLDLR-201ENST00000382096 MAP1LC3CQ9BXW4 147 aa12.9□□□□□ -0.34
VLDLR-201ENST00000382096 TRBV10-3A0A0K0K1G6 114 aa12.89□□□□□ -0.35
VLDLR-201ENST00000382096 TSPEAR-AS2P59090 65 aa12.89□□□□□ -0.35
VLDLR-201ENST00000382096 FABP4P15090 132 aa12.88□□□□□ -0.35
VLDLR-201ENST00000382096 SMCR5Q8TEV8 140 aa12.88□□□□□ -0.35
VLDLR-201ENST00000382096 ETDCA0A1B0GVM5 59 aa12.87□□□□□ -0.35
VLDLR-201ENST00000382096 LEPROTO15243 131 aa12.87□□□□□ -0.35
VLDLR-201ENST00000382096 LINC00483Q53H64 154 aa12.87□□□□□ -0.35
VLDLR-201ENST00000382096 PLNP26678 52 aa12.86□□□□□ -0.35
VLDLR-201ENST00000382096 FP248Q71RG6 208 aaPredicted RBP12.86□□□□□ -0.35
VLDLR-201ENST00000382096 H0Y8G0 127 aa12.85□□□□□ -0.35
VLDLR-201ENST00000382096 Q8NBF4 154 aa12.85□□□□□ -0.35
VLDLR-201ENST00000382096 TRBV10-2A0A0K0K1G8 114 aa12.84□□□□□ -0.35
VLDLR-201ENST00000382096 C4orf48Q5BLP8 95 aa12.84□□□□□ -0.35
VLDLR-201ENST00000382096 HSPB8Q9UJY1 196 aa12.84□□□□□ -0.35
VLDLR-201ENST00000382096 B5MCH6 92 aa12.83□□□□□ -0.36
VLDLR-201ENST00000382096 S100A12P80511 92 aa12.82□□□□□ -0.36
VLDLR-201ENST00000382096 ASB16-AS1Q495Z4 193 aa12.82□□□□□ -0.36
VLDLR-201ENST00000382096 LCE2DQ5TA82 110 aaPredicted RBP12.82□□□□□ -0.36
VLDLR-201ENST00000382096 DAND5Q8N907 189 aa12.82□□□□□ -0.36
VLDLR-201ENST00000382096 PMCHL2Q9BQD1 86 aa12.82□□□□□ -0.36
VLDLR-201ENST00000382096 J3QQQ9 107 aa12.81□□□□□ -0.36
VLDLR-201ENST00000382096 KRTAP13-3Q3SY46 172 aa12.81□□□□□ -0.36
VLDLR-201ENST00000382096 SPINK1P00995 79 aa12.8□□□□□ -0.36
VLDLR-201ENST00000382096 DDTP30046 118 aa12.8□□□□□ -0.36
VLDLR-201ENST00000382096 NMUP48645 174 aa12.8□□□□□ -0.36
VLDLR-201ENST00000382096 DPM2O94777 84 aa12.79□□□□□ -0.36
VLDLR-201ENST00000382096 LINC01547P58512 204 aaPredicted RBP12.79□□□□□ -0.36
VLDLR-201ENST00000382096 SPANXB1Q9NS25 103 aaPredicted RBP12.79□□□□□ -0.36
VLDLR-201ENST00000382096 ERC2-IT1O76042 136 aa12.78□□□□□ -0.36
VLDLR-201ENST00000382096 HERVK_113P61574 105 aa12.78□□□□□ -0.36
VLDLR-201ENST00000382096 NDUFC2O95298 119 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms