RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 CDSNQ15517 529 aa4.08□□□□□ -1.76
RFX3-204ENST00000382004 NHLRC4P0CG21 123 aaPredicted RBP4.07□□□□□ -1.76
RFX3-204ENST00000382004 TM2D3Q9BRN9 247 aa4.07□□□□□ -1.76
RFX3-204ENST00000382004 C16orf90A8MZG2 172 aa4.06□□□□□ -1.76
RFX3-204ENST00000382004 H3BPC8 53 aa4.06□□□□□ -1.76
RFX3-204ENST00000382004 J3QL48 77 aa4.06□□□□□ -1.76
RFX3-204ENST00000382004 Q8NBF4 154 aa4.06□□□□□ -1.76
RFX3-204ENST00000382004 C9orf129Q5T035 196 aaKnown RBP4.06□□□□□ -1.76
RFX3-204ENST00000382004 C11orf72Q8NBR9 251 aa4.06□□□□□ -1.76
RFX3-204ENST00000382004 LRRK2Q5S007 2527 aa4.06□□□□□ -1.76
RFX3-204ENST00000382004 C16orf95Q9H693 158 aa4.06□□□□□ -1.76
RFX3-204ENST00000382004 A0A096LNJ9 63 aa4.06□□□□□ -1.76
RFX3-204ENST00000382004 EPM2AB3EWF7 344 aa4.06□□□□□ -1.76
RFX3-204ENST00000382004 ST20-AS1Q8NBB2 130 aa4.05□□□□□ -1.76
RFX3-204ENST00000382004 KIF25-AS1Q9Y6Z4 181 aa4.05□□□□□ -1.76
RFX3-204ENST00000382004 RTL8CO15255 209 aa4.05□□□□□ -1.76
RFX3-204ENST00000382004 FAM19A4Q96LR4 140 aa4.05□□□□□ -1.76
RFX3-204ENST00000382004 A8MUN3 132 aa4.05□□□□□ -1.76
RFX3-204ENST00000382004 UQCR11O14957 56 aa4.05□□□□□ -1.76
RFX3-204ENST00000382004 Q6ZQT0 140 aa4.05□□□□□ -1.76
RFX3-204ENST00000382004 COA5Q86WW8 74 aa4.05□□□□□ -1.76
RFX3-204ENST00000382004 FAM218AQ96MZ4 157 aa4.05□□□□□ -1.76
RFX3-204ENST00000382004 IGLV6-57P01721 117 aa4.05□□□□□ -1.76
RFX3-204ENST00000382004 Q6ZRP5 223 aa4.04□□□□□ -1.76
RFX3-204ENST00000382004 ELOF1P60002 83 aaKnown RBP4.04□□□□□ -1.76
RFX3-204ENST00000382004 LINC01554Q52M75 96 aa4.04□□□□□ -1.76
RFX3-204ENST00000382004 MIR22HGQ0VDD5 57 aa4.04□□□□□ -1.76
RFX3-204ENST00000382004 BCE1O60756 84 aa4.04□□□□□ -1.76
RFX3-204ENST00000382004 RPS28P62857 69 aaKnown RBP4.04□□□□□ -1.76
RFX3-204ENST00000382004 ACANP16112 2415 aa4.03□□□□□ -1.76
RFX3-204ENST00000382004 ZFYVE26Q68DK2 2539 aa4.03□□□□□ -1.76
RFX3-204ENST00000382004 TRBV7-4A0A0J9YYF1 115 aa4.03□□□□□ -1.76
RFX3-204ENST00000382004 LOC101927531A0A1B0GV80 90 aa4.03□□□□□ -1.76
RFX3-204ENST00000382004 Q6ZRX8 168 aa4.03□□□□□ -1.76
RFX3-204ENST00000382004 FN1P02751 2386 aaKnown RBP4.03□□□□□ -1.76
RFX3-204ENST00000382004 LINC00315P59091 139 aa4.03□□□□□ -1.76
RFX3-204ENST00000382004 IGHV3OR16-9A0A0B4J2B5 98 aa4.02□□□□□ -1.77
RFX3-204ENST00000382004 IGLV5-39A0A0G2JS06 123 aa4.02□□□□□ -1.77
RFX3-204ENST00000382004 COL4A4P53420 1690 aaPredicted RBP4.02□□□□□ -1.77
RFX3-204ENST00000382004 NAV2Q8IVL1 2488 aa4.02□□□□□ -1.77
RFX3-204ENST00000382004 A0A0D9SG42 100 aa4.02□□□□□ -1.77
RFX3-204ENST00000382004 C9orf92A6NGG3 77 aa4.02□□□□□ -1.77
RFX3-204ENST00000382004 TLN1Q9Y490 2541 aaKnown RBP4.01□□□□□ -1.77
RFX3-204ENST00000382004 MRPL34Q9BQ48 92 aaKnown RBP4.01□□□□□ -1.77
RFX3-204ENST00000382004 SMCPP49901 116 aaPredicted RBP4.01□□□□□ -1.77
RFX3-204ENST00000382004 LOC110117498A0A087WWA1 95 aa4.01□□□□□ -1.77
RFX3-204ENST00000382004 A0A1B0GW54 56 aa4.01□□□□□ -1.77
RFX3-204ENST00000382004 LUZP6Q538Z0 58 aa4.01□□□□□ -1.77
RFX3-204ENST00000382004 K7EQZ3 153 aa4.01□□□□□ -1.77
RFX3-204ENST00000382004 DSCR10P59022 87 aa4.01□□□□□ -1.77
RFX3-204ENST00000382004 A8MWP4 228 aa4.01□□□□□ -1.77
RFX3-204ENST00000382004 COX8CQ7Z4L0 72 aa4□□□□□ -1.77
RFX3-204ENST00000382004 LTBP2Q14767 1821 aa4□□□□□ -1.77
RFX3-204ENST00000382004 CYP4F30PQ9H0H9 118 aa4□□□□□ -1.77
RFX3-204ENST00000382004 TLN2Q9Y4G6 2542 aa4□□□□□ -1.77
RFX3-204ENST00000382004 ZNF462Q96JM2 2506 aa3.99□□□□□ -1.77
RFX3-204ENST00000382004 FAM168BA1KXE4 195 aa3.99□□□□□ -1.77
RFX3-204ENST00000382004 COL27A1Q8IZC6 1860 aaPredicted RBP3.99□□□□□ -1.77
RFX3-204ENST00000382004 OBSCN-AS1Q96MR7 158 aa3.99□□□□□ -1.77
RFX3-204ENST00000382004 NBDYA0A0U1RRE5 68 aa3.98□□□□□ -1.77
RFX3-204ENST00000382004 IGLV5-37A0A075B6J1 123 aa3.98□□□□□ -1.77
RFX3-204ENST00000382004 PIEZO2Q9H5I5 2752 aa3.98□□□□□ -1.77
RFX3-204ENST00000382004 CDC42SE1Q9NRR8 79 aa3.97□□□□□ -1.77
RFX3-204ENST00000382004 JMJD1CQ15652 2540 aa3.97□□□□□ -1.77
RFX3-204ENST00000382004 A0A1W2PPR1 153 aa3.96□□□□□ -1.78
RFX3-204ENST00000382004 LINC00588Q9Y4M8 146 aa3.96□□□□□ -1.78
RFX3-204ENST00000382004 ZNF575Q86XF7 245 aa3.96□□□□□ -1.78
RFX3-204ENST00000382004 LINC00304Q8N9R0 145 aa3.95□□□□□ -1.78
RFX3-204ENST00000382004 IGLV5-48A0A075B6I7 105 aa3.95□□□□□ -1.78
RFX3-204ENST00000382004 LINC01546A6NGU7 62 aa3.95□□□□□ -1.78
RFX3-204ENST00000382004 CD164Q04900 197 aa3.95□□□□□ -1.78
RFX3-204ENST00000382004 LCA10Q71F78 164 aa3.95□□□□□ -1.78
RFX3-204ENST00000382004 RBM12B-AS1Q9P1G2 102 aa3.95□□□□□ -1.78
RFX3-204ENST00000382004 PRO0461Q9UI25 63 aa3.95□□□□□ -1.78
RFX3-204ENST00000382004 PRO3102Q9H379 93 aa3.95□□□□□ -1.78
RFX3-204ENST00000382004 C8orf17Q9NRJ1 99 aa3.95□□□□□ -1.78
RFX3-204ENST00000382004 KTN1-AS1Q86SY8 53 aa3.94□□□□□ -1.78
RFX3-204ENST00000382004 IGLV5-45A0A087WSX0 123 aa3.94□□□□□ -1.78
RFX3-204ENST00000382004 ABCA12Q86UK0 2595 aa3.94□□□□□ -1.78
RFX3-204ENST00000382004 GVQW2A0A096LPI5 108 aaPredicted RBP3.94□□□□□ -1.78
RFX3-204ENST00000382004 H3BNG1 76 aa3.94□□□□□ -1.78
RFX3-204ENST00000382004 ERC2-IT1O76042 136 aa3.94□□□□□ -1.78
RFX3-204ENST00000382004 IGFL1Q6UW32 110 aa3.93□□□□□ -1.78
RFX3-204ENST00000382004 A0A1B0GVX0 72 aa3.92□□□□□ -1.78
RFX3-204ENST00000382004 Q8N1X5 172 aa3.92□□□□□ -1.78
RFX3-204ENST00000382004 SMR3BP02814 79 aaPredicted RBP3.92□□□□□ -1.78
RFX3-204ENST00000382004 PRR15Q8IV56 129 aa3.92□□□□□ -1.78
RFX3-204ENST00000382004 CSNK1G2-AS1Q8NCQ2 148 aa3.92□□□□□ -1.78
RFX3-204ENST00000382004 A0A0G2JQZ4 141 aa3.92□□□□□ -1.78
RFX3-204ENST00000382004 A0A1W2PNN7 141 aa3.92□□□□□ -1.78
RFX3-204ENST00000382004 LINC00336Q6ZUF6 198 aa3.91□□□□□ -1.78
RFX3-204ENST00000382004 ANAPC11Q9NYG5 84 aa3.91□□□□□ -1.78
RFX3-204ENST00000382004 DNAH10OSP0CZ25 163 aa3.9□□□□□ -1.78
RFX3-204ENST00000382004 FAM104AQ969W3 186 aa3.9□□□□□ -1.78
RFX3-204ENST00000382004 WWC2-AS2Q96NR7 200 aa3.9□□□□□ -1.78
RFX3-204ENST00000382004 IGLV1-50A0A075B6I6 118 aa3.9□□□□□ -1.79
RFX3-204ENST00000382004 LINC00483Q53H64 154 aa3.9□□□□□ -1.79
RFX3-204ENST00000382004 Q8NAQ8 132 aa3.9□□□□□ -1.79
RFX3-204ENST00000382004 IGF2RP11717 2491 aa3.89□□□□□ -1.79
RFX3-204ENST00000382004 CAMK2N1Q7Z7J9 78 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms