RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 BRI3O95415 125 aa4.1□□□□□ -1.75
RFC1-202ENST00000381897 ATP11AUNQ6ZP68 121 aa4.1□□□□□ -1.75
RFC1-202ENST00000381897 BBC3Q96PG8 261 aaPredicted RBP4.1□□□□□ -1.75
RFC1-202ENST00000381897 HCG22E2RYF7 251 aa4.1□□□□□ -1.75
RFC1-202ENST00000381897 LRRK2Q5S007 2527 aa4.1□□□□□ -1.75
RFC1-202ENST00000381897 XCL1P47992 114 aa4.1□□□□□ -1.75
RFC1-202ENST00000381897 Q9BRP9 147 aa4.1□□□□□ -1.75
RFC1-202ENST00000381897 SPATA3Q8NHX4 192 aa4.09□□□□□ -1.75
RFC1-202ENST00000381897 SMCR5Q8TEV8 140 aa4.09□□□□□ -1.75
RFC1-202ENST00000381897 K7EQG2 157 aa4.09□□□□□ -1.76
RFC1-202ENST00000381897 ACYP2P14621 99 aa4.09□□□□□ -1.76
RFC1-202ENST00000381897 SMIM11BQ8TCY0 68 aa4.09□□□□□ -1.76
RFC1-202ENST00000381897 ZNF580Q9UK33 172 aa4.09□□□□□ -1.76
RFC1-202ENST00000381897 KRTAP23-1A1A580 65 aa4.09□□□□□ -1.76
RFC1-202ENST00000381897 C19orf73Q9NVV2 129 aa4.09□□□□□ -1.76
RFC1-202ENST00000381897 DSCAML1Q8TD84 2053 aa4.08□□□□□ -1.76
RFC1-202ENST00000381897 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.08□□□□□ -1.763e-58■■■■■ 199
RFC1-202ENST00000381897 F8WEM9 126 aa4.08□□□□□ -1.76
RFC1-202ENST00000381897 ABCA2Q9BZC7 2435 aa4.08□□□□□ -1.76
RFC1-202ENST00000381897 DCHS2Q6V1P9 2916 aa4.08□□□□□ -1.76
RFC1-202ENST00000381897 IGLV1-50A0A075B6I6 118 aa4.08□□□□□ -1.76
RFC1-202ENST00000381897 A0A087WVE0 104 aa4.08□□□□□ -1.76
RFC1-202ENST00000381897 BRD3OSQ6XYD6 125 aa4.08□□□□□ -1.76
RFC1-202ENST00000381897 IGKV2-28A0A075B6P5 120 aa4.08□□□□□ -1.76
RFC1-202ENST00000381897 IGKV2D-28P01615 120 aa4.08□□□□□ -1.76
RFC1-202ENST00000381897 HTN3P15516 51 aa4.08□□□□□ -1.76
RFC1-202ENST00000381897 FAM19A1Q7Z5A9 133 aa4.08□□□□□ -1.76
RFC1-202ENST00000381897 C11orf72Q8NBR9 251 aa4.08□□□□□ -1.76
RFC1-202ENST00000381897 LINC00846Q9NV44 126 aa4.08□□□□□ -1.76
RFC1-202ENST00000381897 ANKHD1Q8IWZ3 2542 aaKnown RBP4.08□□□□□ -1.76
RFC1-202ENST00000381897 NDUFB1O75438 58 aa4.07□□□□□ -1.76
RFC1-202ENST00000381897 ZFP36P26651 326 aaKnown RBP4.07□□□□□ -1.76
RFC1-202ENST00000381897 IGLV6-57P01721 117 aa4.07□□□□□ -1.76
RFC1-202ENST00000381897 C9orf116Q5BN46 136 aaPredicted RBP4.07□□□□□ -1.76
RFC1-202ENST00000381897 LINC00242Q5T6M2 205 aa4.07□□□□□ -1.76
RFC1-202ENST00000381897 Q6ZRP5 223 aa4.07□□□□□ -1.76
RFC1-202ENST00000381897 C2CD3Q4AC94 2353 aa4.07□□□□□ -1.76
RFC1-202ENST00000381897 C1orf134Q5TEV5 83 aa4.07□□□□□ -1.76
RFC1-202ENST00000381897 PRR15Q8IV56 129 aa4.07□□□□□ -1.76
RFC1-202ENST00000381897 CENPEQ02224 2701 aa4.07□□□□□ -1.76
RFC1-202ENST00000381897 A0A087WYN8 130 aa4.06□□□□□ -1.76
RFC1-202ENST00000381897 ZNF575Q86XF7 245 aa4.06□□□□□ -1.76
RFC1-202ENST00000381897 MAPK1IP1LQ8NDC0 245 aa4.06□□□□□ -1.76
RFC1-202ENST00000381897 C8orf17Q9NRJ1 99 aa4.06□□□□□ -1.76
RFC1-202ENST00000381897 BSNQ9UPA5 3926 aa4.06□□□□□ -1.76
RFC1-202ENST00000381897 CELSR1Q9NYQ6 3014 aa4.06□□□□□ -1.76
RFC1-202ENST00000381897 M0R378 163 aa4.06□□□□□ -1.76
RFC1-202ENST00000381897 LINC00313P59037 77 aa4.06□□□□□ -1.76
RFC1-202ENST00000381897 TYMSOSQ8TAI1 123 aa4.06□□□□□ -1.76
RFC1-202ENST00000381897 LRCOL1A6NCL2 159 aa4.05□□□□□ -1.76
RFC1-202ENST00000381897 MIFP14174 115 aa4.05□□□□□ -1.76
RFC1-202ENST00000381897 SLPIP03973 132 aa4.05□□□□□ -1.76
RFC1-202ENST00000381897 ZFHX3Q15911 3703 aa4.05□□□□□ -1.76
RFC1-202ENST00000381897 TRBV6-4A0A1B0GX49 114 aa4.05□□□□□ -1.76
RFC1-202ENST00000381897 CCL18P55774 89 aa4.04□□□□□ -1.76
RFC1-202ENST00000381897 MUC7Q8TAX7 377 aa4.04□□□□□ -1.76
RFC1-202ENST00000381897 NOTCH3Q9UM47 2321 aa4.04□□□□□ -1.76
RFC1-202ENST00000381897 Q8N814 137 aa4.04□□□□□ -1.76
RFC1-202ENST00000381897 CDC42SE2Q9NRR3 84 aa4.04□□□□□ -1.76
RFC1-202ENST00000381897 PROK1P58294 105 aa4.04□□□□□ -1.76
RFC1-202ENST00000381897 COX6A2Q02221 97 aa4.04□□□□□ -1.76
RFC1-202ENST00000381897 Q8N2B8 174 aa4.03□□□□□ -1.76
RFC1-202ENST00000381897 FAM218AQ96MZ4 157 aa4.03□□□□□ -1.76
RFC1-202ENST00000381897 VPS13CQ709C8 3753 aa4.03□□□□□ -1.76
RFC1-202ENST00000381897 COX17Q14061 63 aa4.03□□□□□ -1.76
RFC1-202ENST00000381897 NREPQ16612 68 aa4.03□□□□□ -1.77
RFC1-202ENST00000381897 LINC00483Q53H64 154 aa4.03□□□□□ -1.77
RFC1-202ENST00000381897 DIRC1Q969H9 104 aa4.03□□□□□ -1.77
RFC1-202ENST00000381897 POLQO75417 2590 aa4.02□□□□□ -1.77
RFC1-202ENST00000381897 LINC00337Q8N6G1 96 aa4.02□□□□□ -1.77
RFC1-202ENST00000381897 IGLV4-60A0A075B6I1 120 aa4.02□□□□□ -1.77
RFC1-202ENST00000381897 CSMD2Q7Z408 3487 aa4.02□□□□□ -1.77
RFC1-202ENST00000381897 SSBP3-AS1Q7Z2R9 100 aa4.02□□□□□ -1.77
RFC1-202ENST00000381897 ZFYVE26Q68DK2 2539 aa4.02□□□□□ -1.77
RFC1-202ENST00000381897 PRRC2AP48634 2157 aaKnown RBP4.01□□□□□ -1.77
RFC1-202ENST00000381897 NAV2Q8IVL1 2488 aa4.01□□□□□ -1.77
RFC1-202ENST00000381897 LMO4P61968 165 aa4.01□□□□□ -1.77
RFC1-202ENST00000381897 NOP10Q9NPE3 64 aaKnown RBP4.01□□□□□ -1.77
RFC1-202ENST00000381897 MTORP42345 2549 aa4.01□□□□□ -1.77
RFC1-202ENST00000381897 SYCNQ0VAF6 134 aa4.01□□□□□ -1.77
RFC1-202ENST00000381897 NTM-AS1Q6ZSK4 140 aa4.01□□□□□ -1.77
RFC1-202ENST00000381897 CSPG4Q6UVK1 2322 aa4.01□□□□□ -1.77
RFC1-202ENST00000381897 CRYBG3Q68DQ2 2970 aa4.01□□□□□ -1.77
RFC1-202ENST00000381897 A8MWP4 228 aa4.01□□□□□ -1.77
RFC1-202ENST00000381897 LYPD5Q6UWN5 251 aa4.01□□□□□ -1.77
RFC1-202ENST00000381897 Q8IZM0 81 aa4.01□□□□□ -1.77
RFC1-202ENST00000381897 ABCA12Q86UK0 2595 aa4.01□□□□□ -1.77
RFC1-202ENST00000381897 UTP20O75691 2785 aaKnown RBP4□□□□□ -1.77
RFC1-202ENST00000381897 SETD2Q9BYW2 2564 aaPredicted RBP4□□□□□ -1.77
RFC1-202ENST00000381897 BPY2O14599 106 aa4□□□□□ -1.77
RFC1-202ENST00000381897 KLKP1Q107X0 134 aa4□□□□□ -1.77
RFC1-202ENST00000381897 COX7BP24311 80 aa4□□□□□ -1.77
RFC1-202ENST00000381897 MIR22HGQ0VDD5 57 aa4□□□□□ -1.77
RFC1-202ENST00000381897 OBSCN-AS1Q96MR7 158 aa4□□□□□ -1.77
RFC1-202ENST00000381897 KLK12Q9UKR0 248 aa4□□□□□ -1.77
RFC1-202ENST00000381897 LOC110117498A0A087WWA1 95 aa4□□□□□ -1.77
RFC1-202ENST00000381897 CYP4F30PQ9H0H9 118 aa4□□□□□ -1.77
RFC1-202ENST00000381897 IGKV4-1P06312 121 aa3.99□□□□□ -1.77
RFC1-202ENST00000381897 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.99□□□□□ -1.77
RFC1-202ENST00000381897 Q5XG85 94 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms