RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 Q6ZRU5 148 aa11.82□□□□□ -0.52
PDX1-201ENST00000381033 CIRBPQ14011 172 aaKnown RBP11.81□□□□□ -0.52
PDX1-201ENST00000381033 LINC00269Q8N2A0 174 aa11.81□□□□□ -0.52
PDX1-201ENST00000381033 COX7B2Q8TF08 81 aa11.81□□□□□ -0.52
PDX1-201ENST00000381033 TIMM17BO60830 172 aa11.81□□□□□ -0.52
PDX1-201ENST00000381033 SPART-AS1P0CW21 52 aa11.8□□□□□ -0.52
PDX1-201ENST00000381033 C2orf82Q6UX34 121 aa11.8□□□□□ -0.52
PDX1-201ENST00000381033 SMCR5Q8TEV8 140 aa11.8□□□□□ -0.52
PDX1-201ENST00000381033 A0A087WZ39 114 aa11.79□□□□□ -0.52
PDX1-201ENST00000381033 SS18Q15532 418 aa11.79□□□□□ -0.52
PDX1-201ENST00000381033 PRR15Q8IV56 129 aa11.79□□□□□ -0.52
PDX1-201ENST00000381033 A0A1B0GUV1 79 aa11.78□□□□□ -0.52
PDX1-201ENST00000381033 ICOSQ9Y6W8 199 aa11.77□□□□□ -0.53
PDX1-201ENST00000381033 ANGP03950 147 aaKnown RBP11.77□□□□□ -0.53
PDX1-201ENST00000381033 CLEC2BQ92478 149 aa11.77□□□□□ -0.53
PDX1-201ENST00000381033 PRB2P02812 416 aaPredicted RBP11.76□□□□□ -0.53
PDX1-201ENST00000381033 MIR7-3HGQ8N6C7 128 aa11.76□□□□□ -0.53
PDX1-201ENST00000381033 DNAH3Q8TD57 4116 aa11.75□□□□□ -0.53
PDX1-201ENST00000381033 TRBV30A0A0K0K1B3 111 aa11.74□□□□□ -0.53
PDX1-201ENST00000381033 MGAM2Q2M2H8 2515 aa11.73□□□□□ -0.53
PDX1-201ENST00000381033 LINC00158P58513 81 aa11.73□□□□□ -0.53
PDX1-201ENST00000381033 SDIM1Q6ZPB5 146 aa11.73□□□□□ -0.53
PDX1-201ENST00000381033 REG3AQ06141 175 aa11.72□□□□□ -0.53
PDX1-201ENST00000381033 Q6ZTC4 211 aa11.71□□□□□ -0.53
PDX1-201ENST00000381033 CHCHD10Q8WYQ3 142 aaPredicted RBP11.71□□□□□ -0.53
PDX1-201ENST00000381033 EGFEM1PQ0D2K5 195 aa11.7□□□□□ -0.54
PDX1-201ENST00000381033 COPS9Q8WXC6 57 aa11.69□□□□□ -0.54
PDX1-201ENST00000381033 LINC00474Q9P2X8 69 aa11.69□□□□□ -0.54
PDX1-201ENST00000381033 RBM12B-AS1Q9P1G2 102 aa11.68□□□□□ -0.54
PDX1-201ENST00000381033 KLK12Q9UKR0 248 aa11.68□□□□□ -0.54
PDX1-201ENST00000381033 IGKV2-28A0A075B6P5 120 aa11.68□□□□□ -0.54
PDX1-201ENST00000381033 IGKV2D-28P01615 120 aa11.68□□□□□ -0.54
PDX1-201ENST00000381033 CCL18P55774 89 aa11.67□□□□□ -0.54
PDX1-201ENST00000381033 LINC00337Q8N6G1 96 aa11.67□□□□□ -0.54
PDX1-201ENST00000381033 LAMTOR3Q9UHA4 124 aa11.67□□□□□ -0.54
PDX1-201ENST00000381033 C9orf116Q5BN46 136 aaPredicted RBP11.67□□□□□ -0.54
PDX1-201ENST00000381033 LYPD5Q6UWN5 251 aa11.67□□□□□ -0.54
PDX1-201ENST00000381033 SND1-IT1Q9HBX3 110 aa11.66□□□□□ -0.54
PDX1-201ENST00000381033 A0A0J9YWU9 116 aa11.66□□□□□ -0.54
PDX1-201ENST00000381033 LELP1Q5T871 98 aa11.66□□□□□ -0.54
PDX1-201ENST00000381033 CD164L2Q6UWJ8 174 aa11.65□□□□□ -0.54
PDX1-201ENST00000381033 NANOS2P60321 138 aaKnown RBP11.65□□□□□ -0.54
PDX1-201ENST00000381033 KIAA0087Q14695 138 aa11.65□□□□□ -0.54
PDX1-201ENST00000381033 KPRPQ5T749 579 aaPredicted RBP11.65□□□□□ -0.54
PDX1-201ENST00000381033 C6orf223Q8N319 242 aa11.64□□□□□ -0.55
PDX1-201ENST00000381033 COX7A2LO14548 114 aa11.64□□□□□ -0.55
PDX1-201ENST00000381033 WFDC10BQ8IUB3 73 aa11.64□□□□□ -0.55
PDX1-201ENST00000381033 TRBV7-6A0A0J9YX20 115 aa11.63□□□□□ -0.55
PDX1-201ENST00000381033 IBA57-AS1B1ANH7 110 aa11.63□□□□□ -0.55
PDX1-201ENST00000381033 COX6CP09669 75 aa11.63□□□□□ -0.55
PDX1-201ENST00000381033 ENHOQ6UWT2 76 aa11.63□□□□□ -0.55
PDX1-201ENST00000381033 Q8IZM0 81 aa11.63□□□□□ -0.55
PDX1-201ENST00000381033 PRR3P79522 188 aaKnown RBP11.62□□□□□ -0.55
PDX1-201ENST00000381033 LST1O00453 97 aa11.62□□□□□ -0.55
PDX1-201ENST00000381033 USP17L23D6RBM5 183 aa11.61□□□□□ -0.55
PDX1-201ENST00000381033 FAM218AQ96MZ4 157 aa11.61□□□□□ -0.55
PDX1-201ENST00000381033 C10orf25Q5T742 122 aa11.61□□□□□ -0.55
PDX1-201ENST00000381033 COL7A1Q02388 2944 aa11.61□□□□□ -0.55
PDX1-201ENST00000381033 CCKP06307 115 aa11.59□□□□□ -0.55
PDX1-201ENST00000381033 HUWE1Q7Z6Z7 4374 aaKnown RBP11.59□□□□□ -0.55
PDX1-201ENST00000381033 H7BZZ5 65 aa11.58□□□□□ -0.56
PDX1-201ENST00000381033 CRPP02741 224 aa11.58□□□□□ -0.56
PDX1-201ENST00000381033 ESRGQ1W209 222 aa11.58□□□□□ -0.56
PDX1-201ENST00000381033 PRR34Q9NV39 138 aa11.58□□□□□ -0.56
PDX1-201ENST00000381033 LYSTQ99698 3801 aa11.58□□□□□ -0.56
PDX1-201ENST00000381033 UNQ6190/PRO20217Q6UXQ8 127 aa11.57□□□□□ -0.56
PDX1-201ENST00000381033 RBM3P98179 157 aaKnown RBP11.57□□□□□ -0.56
PDX1-201ENST00000381033 Q8NDZ9 215 aa11.56□□□□□ -0.56
PDX1-201ENST00000381033 SMIM11BQ8TCY0 68 aa11.56□□□□□ -0.56
PDX1-201ENST00000381033 C20orf197Q8N268 126 aa11.55□□□□□ -0.56
PDX1-201ENST00000381033 TM2D3Q9BRN9 247 aa11.55□□□□□ -0.56
PDX1-201ENST00000381033 DEFB131BA0A096LNP1 70 aa11.55□□□□□ -0.56
PDX1-201ENST00000381033 TRAV13-2A0A0B4J235 113 aa11.54□□□□□ -0.56
PDX1-201ENST00000381033 Q9HAA7 133 aa11.54□□□□□ -0.56
PDX1-201ENST00000381033 SPAG11BQ08648 103 aa11.53□□□□□ -0.56
PDX1-201ENST00000381033 STAB2Q8WWQ8 2551 aa11.53□□□□□ -0.56
PDX1-201ENST00000381033 PRR26Q8N8Z3 221 aa11.52□□□□□ -0.56
PDX1-201ENST00000381033 VPREB1P12018 145 aa11.52□□□□□ -0.57
PDX1-201ENST00000381033 MPLKIPQ8TAP9 179 aa11.52□□□□□ -0.57
PDX1-201ENST00000381033 RPL28P46779 137 aaKnown RBP11.51□□□□□ -0.57
PDX1-201ENST00000381033 A0A087WVE0 104 aa11.5□□□□□ -0.57
PDX1-201ENST00000381033 A0A087WYN8 130 aa11.5□□□□□ -0.57
PDX1-201ENST00000381033 K7EIL1 84 aa11.5□□□□□ -0.57
PDX1-201ENST00000381033 HIGD2BQ4VC39 106 aa11.5□□□□□ -0.57
PDX1-201ENST00000381033 S100A7L2Q5SY68 101 aa11.49□□□□□ -0.57
PDX1-201ENST00000381033 C8orf87E5RJ46 101 aa11.48□□□□□ -0.57
PDX1-201ENST00000381033 H3BNG1 76 aa11.48□□□□□ -0.57
PDX1-201ENST00000381033 KTN1-AS1Q86SY8 53 aa11.48□□□□□ -0.57
PDX1-201ENST00000381033 Q6JHZ5 121 aa11.48□□□□□ -0.57
PDX1-201ENST00000381033 C22orf24Q9Y442 160 aa11.47□□□□□ -0.57
PDX1-201ENST00000381033 NCR3O14931 201 aa11.47□□□□□ -0.57
PDX1-201ENST00000381033 GHRHP01286 108 aa11.47□□□□□ -0.57
PDX1-201ENST00000381033 TENM2Q9NT68 2774 aa11.46□□□□□ -0.57
PDX1-201ENST00000381033 IGKV3D-7A0A0C4DH55 119 aa11.46□□□□□ -0.57
PDX1-201ENST00000381033 KRTAP26-1Q6PEX3 210 aa11.46□□□□□ -0.57
PDX1-201ENST00000381033 C6orf48Q9UBA6 75 aa11.45□□□□□ -0.58
PDX1-201ENST00000381033 BAALC-AS2P0C853 105 aa11.44□□□□□ -0.58
PDX1-201ENST00000381033 COX17Q14061 63 aa11.44□□□□□ -0.58
PDX1-201ENST00000381033 XAGE1AQ9HD64 81 aa11.44□□□□□ -0.58
PDX1-201ENST00000381033 SLPIP03973 132 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 329.1 ms