RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 SORL1Q92673 2214 aa11.61□□□□□ -0.55
COL4A3BP-203ENST00000380494 H7BZZ5 65 aa11.61□□□□□ -0.55
COL4A3BP-203ENST00000380494 WNK1Q9H4A3 2382 aa11.6□□□□□ -0.55
COL4A3BP-203ENST00000380494 KTN1-AS1Q86SY8 53 aa11.59□□□□□ -0.55
COL4A3BP-203ENST00000380494 KRTAP10-9P60411 292 aa11.58□□□□□ -0.56
COL4A3BP-203ENST00000380494 K7EQZ3 153 aa11.58□□□□□ -0.56
COL4A3BP-203ENST00000380494 C2CD3Q4AC94 2353 aa11.58□□□□□ -0.56
COL4A3BP-203ENST00000380494 ST20-AS1Q8NBB2 130 aa11.57□□□□□ -0.56
COL4A3BP-203ENST00000380494 RPL37AP61513 92 aaKnown RBP11.55□□□□□ -0.56
COL4A3BP-203ENST00000380494 C1orf134Q5TEV5 83 aa11.55□□□□□ -0.56
COL4A3BP-203ENST00000380494 PTPRBP23467 1997 aa11.55□□□□□ -0.56
COL4A3BP-203ENST00000380494 LINC00313P59037 77 aa11.54□□□□□ -0.56
COL4A3BP-203ENST00000380494 C16orf90A8MZG2 172 aa11.53□□□□□ -0.56
COL4A3BP-203ENST00000380494 EPM2AB3EWF7 344 aa11.53□□□□□ -0.56
COL4A3BP-203ENST00000380494 LINC01600Q96MT4 127 aa11.52□□□□□ -0.57
COL4A3BP-203ENST00000380494 UQCR11O14957 56 aa11.51□□□□□ -0.57
COL4A3BP-203ENST00000380494 KCNQ1DNQ9H478 68 aa11.51□□□□□ -0.57
COL4A3BP-203ENST00000380494 SMR3AQ99954 134 aa11.51□□□□□ -0.57
COL4A3BP-203ENST00000380494 PRR15Q8IV56 129 aa11.51□□□□□ -0.57
COL4A3BP-203ENST00000380494 LINC00528Q8N1L1 170 aa11.5□□□□□ -0.57
COL4A3BP-203ENST00000380494 MRPL34Q9BQ48 92 aaKnown RBP11.5□□□□□ -0.57
COL4A3BP-203ENST00000380494 PTPRQQ9UMZ3 2332 aa11.5□□□□□ -0.57
COL4A3BP-203ENST00000380494 Q6ZRP5 223 aa11.49□□□□□ -0.57
COL4A3BP-203ENST00000380494 LCA10Q71F78 164 aa11.49□□□□□ -0.57
COL4A3BP-203ENST00000380494 ZFHX2Q9C0A1 2572 aaPredicted RBP11.49□□□□□ -0.57
COL4A3BP-203ENST00000380494 SPINT4Q6UDR6 99 aa11.48□□□□□ -0.57
COL4A3BP-203ENST00000380494 FAM229AH3BQW9 127 aa11.48□□□□□ -0.57
COL4A3BP-203ENST00000380494 FAM208BQ5VWN6 2430 aa11.48□□□□□ -0.57
COL4A3BP-203ENST00000380494 EIF4EBP3O60516 100 aaPredicted RBP11.47□□□□□ -0.57
COL4A3BP-203ENST00000380494 PHF5AQ7RTV0 110 aaKnown RBP11.47□□□□□ -0.57
COL4A3BP-203ENST00000380494 COL27A1Q8IZC6 1860 aaPredicted RBP11.46□□□□□ -0.57
COL4A3BP-203ENST00000380494 IGLV1-50A0A075B6I6 118 aa11.46□□□□□ -0.57
COL4A3BP-203ENST00000380494 COL4A2P08572 1712 aa11.44□□□□□ -0.58
COL4A3BP-203ENST00000380494 SPANXA2-OT1Q8N9U9 137 aa11.43□□□□□ -0.58
COL4A3BP-203ENST00000380494 SPACA4Q8TDM5 124 aa11.43□□□□□ -0.58
COL4A3BP-203ENST00000380494 MIR22HGQ0VDD5 57 aa11.42□□□□□ -0.58
COL4A3BP-203ENST00000380494 Q8NAQ8 132 aa11.42□□□□□ -0.58
COL4A3BP-203ENST00000380494 OBSCN-AS1Q96MR7 158 aa11.4□□□□□ -0.58
COL4A3BP-203ENST00000380494 IGFL1Q6UW32 110 aa11.4□□□□□ -0.58
COL4A3BP-203ENST00000380494 MDFIQ99750 246 aa11.39□□□□□ -0.59
COL4A3BP-203ENST00000380494 IGLV8-61A0A075B6I0 122 aa11.38□□□□□ -0.59
COL4A3BP-203ENST00000380494 C8orf17Q9NRJ1 99 aa11.37□□□□□ -0.59
COL4A3BP-203ENST00000380494 DNAH10OSP0CZ25 163 aa11.37□□□□□ -0.59
COL4A3BP-203ENST00000380494 CDC42SE1Q9NRR8 79 aa11.36□□□□□ -0.59
COL4A3BP-203ENST00000380494 CSPG4Q6UVK1 2322 aa11.36□□□□□ -0.59
COL4A3BP-203ENST00000380494 Q8N377 158 aa11.35□□□□□ -0.59
COL4A3BP-203ENST00000380494 PLA2G2DQ9UNK4 145 aa11.35□□□□□ -0.59
COL4A3BP-203ENST00000380494 Q1T7F1 81 aa11.34□□□□□ -0.59
COL4A3BP-203ENST00000380494 Q5XG85 94 aa11.33□□□□□ -0.6
COL4A3BP-203ENST00000380494 SSBP3-AS1Q7Z2R9 100 aa11.33□□□□□ -0.6
COL4A3BP-203ENST00000380494 PRR34Q9NV39 138 aa11.33□□□□□ -0.6
COL4A3BP-203ENST00000380494 FAM168BA1KXE4 195 aa11.32□□□□□ -0.6
COL4A3BP-203ENST00000380494 CSNK1G2-AS1Q8NCQ2 148 aa11.32□□□□□ -0.6
COL4A3BP-203ENST00000380494 LINC00588Q9Y4M8 146 aa11.32□□□□□ -0.6
COL4A3BP-203ENST00000380494 SPG11Q96JI7 2443 aa11.32□□□□□ -0.6
COL4A3BP-203ENST00000380494 C9orf129Q5T035 196 aaKnown RBP11.31□□□□□ -0.6
COL4A3BP-203ENST00000380494 A0A1B0GVX0 72 aa11.31□□□□□ -0.6
COL4A3BP-203ENST00000380494 RTL8CO15255 209 aa11.29□□□□□ -0.6
COL4A3BP-203ENST00000380494 TLX1NBP0CAT3 122 aa11.28□□□□□ -0.6
COL4A3BP-203ENST00000380494 Q96NJ1 140 aa11.28□□□□□ -0.6
COL4A3BP-203ENST00000380494 MUC6Q6W4X9 2439 aa11.28□□□□□ -0.6
COL4A3BP-203ENST00000380494 ACACBO00763 2458 aa11.26□□□□□ -0.61
COL4A3BP-203ENST00000380494 CHTF8P0CG12 524 aa11.26□□□□□ -0.61
COL4A3BP-203ENST00000380494 NBDYA0A0U1RRE5 68 aa11.26□□□□□ -0.61
COL4A3BP-203ENST00000380494 C15orf56Q8N910 161 aa11.25□□□□□ -0.61
COL4A3BP-203ENST00000380494 TYMSOSQ8TAI1 123 aa11.24□□□□□ -0.61
COL4A3BP-203ENST00000380494 RBM12B-AS1Q9P1G2 102 aa11.24□□□□□ -0.61
COL4A3BP-203ENST00000380494 OTOGLQ3ZCN5 2332 aa11.23□□□□□ -0.61
COL4A3BP-203ENST00000380494 LINC00612Q8N6U2 182 aa11.23□□□□□ -0.61
COL4A3BP-203ENST00000380494 CRIPTQ9P021 101 aa11.22□□□□□ -0.61
COL4A3BP-203ENST00000380494 PCSK5Q92824 1860 aa11.21□□□□□ -0.61
COL4A3BP-203ENST00000380494 OCR1Q9BZK8 76 aa11.21□□□□□ -0.61
COL4A3BP-203ENST00000380494 A0A1W2PNM2 257 aa11.18□□□□□ -0.62
COL4A3BP-203ENST00000380494 NAV2Q8IVL1 2488 aa11.18□□□□□ -0.62
COL4A3BP-203ENST00000380494 IGLV5-48A0A075B6I7 105 aa11.18□□□□□ -0.62
COL4A3BP-203ENST00000380494 ATRXP46100 2492 aa11.17□□□□□ -0.62
COL4A3BP-203ENST00000380494 DSCR10P59022 87 aa11.17□□□□□ -0.62
COL4A3BP-203ENST00000380494 H3BS24 57 aa11.13□□□□□ -0.63
COL4A3BP-203ENST00000380494 Q75L30 129 aa11.13□□□□□ -0.63
COL4A3BP-203ENST00000380494 GIG44P09565 113 aaPredicted RBP11.11□□□□□ -0.63
COL4A3BP-203ENST00000380494 FP248Q71RG6 208 aaPredicted RBP11.1□□□□□ -0.63
COL4A3BP-203ENST00000380494 PTPN13Q12923 2485 aa11.1□□□□□ -0.63
COL4A3BP-203ENST00000380494 IGLV5-37A0A075B6J1 123 aa11.1□□□□□ -0.63
COL4A3BP-203ENST00000380494 HIVEP3Q5T1R4 2406 aa11.09□□□□□ -0.63
COL4A3BP-203ENST00000380494 CUL9Q8IWT3 2517 aa11.09□□□□□ -0.63
COL4A3BP-203ENST00000380494 MUC4Q99102 2169 aa11.08□□□□□ -0.64
COL4A3BP-203ENST00000380494 ZNF861PO60384 105 aa11.08□□□□□ -0.64
COL4A3BP-203ENST00000380494 FAM104AQ969W3 186 aa11.08□□□□□ -0.64
COL4A3BP-203ENST00000380494 APLNQ9ULZ1 77 aa11.07□□□□□ -0.64
COL4A3BP-203ENST00000380494 ZNF575Q86XF7 245 aa11.06□□□□□ -0.64
COL4A3BP-203ENST00000380494 C19orf73Q9NVV2 129 aa11.06□□□□□ -0.64
COL4A3BP-203ENST00000380494 IGLV7-46A0A075B6I9 117 aa11.05□□□□□ -0.64
COL4A3BP-203ENST00000380494 SPRR4Q96PI1 79 aa11.04□□□□□ -0.64
COL4A3BP-203ENST00000380494 A0A0G2JQZ4 141 aa11.03□□□□□ -0.64
COL4A3BP-203ENST00000380494 A0A1W2PNN7 141 aa11.03□□□□□ -0.64
COL4A3BP-203ENST00000380494 PLA2G1BP04054 148 aaKnown RBP11.02□□□□□ -0.65
COL4A3BP-203ENST00000380494 CYSTM1Q9H1C7 97 aa11.02□□□□□ -0.65
COL4A3BP-203ENST00000380494 LINC01554Q52M75 96 aa11.01□□□□□ -0.65
COL4A3BP-203ENST00000380494 CNBPP62633 177 aaKnown RBP10.97□□□□□ -0.65
COL4A3BP-203ENST00000380494 LINC01558Q9Y6Z2 57 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms