RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 C20orf197Q8N268 126 aa9.19□□□□□ -0.94
NPHP4-203ENST00000378169 NBEAL1Q6ZS30 2694 aa9.19□□□□□ -0.94
NPHP4-203ENST00000378169 NDUFB1O75438 58 aa9.18□□□□□ -0.94
NPHP4-203ENST00000378169 B9D2Q9BPU9 175 aa9.18□□□□□ -0.94
NPHP4-203ENST00000378169 H0Y9J4 135 aa9.18□□□□□ -0.94
NPHP4-203ENST00000378169 USP17L23D6RBM5 183 aa9.17□□□□□ -0.94
NPHP4-203ENST00000378169 WFDC9Q8NEX5 89 aa9.17□□□□□ -0.94
NPHP4-203ENST00000378169 LRCOL1A6NCL2 159 aa9.17□□□□□ -0.94
NPHP4-203ENST00000378169 Q8N814 137 aa9.16□□□□□ -0.94
NPHP4-203ENST00000378169 KRTAP24-1Q3LI83 254 aa9.16□□□□□ -0.94
NPHP4-203ENST00000378169 SOSTDC1Q6X4U4 206 aa9.16□□□□□ -0.94
NPHP4-203ENST00000378169 CRYBG3Q68DQ2 2970 aa9.15□□□□□ -0.94
NPHP4-203ENST00000378169 Q6ZRU5 148 aa9.15□□□□□ -0.95
NPHP4-203ENST00000378169 LOC107984640A0A0U1RRK4 108 aa9.14□□□□□ -0.95
NPHP4-203ENST00000378169 IGLV5-45A0A087WSX0 123 aa9.13□□□□□ -0.95
NPHP4-203ENST00000378169 NDUFC2-KCTD14E9PQ53 114 aa9.13□□□□□ -0.95
NPHP4-203ENST00000378169 SMCPP49901 116 aaPredicted RBP9.13□□□□□ -0.95
NPHP4-203ENST00000378169 MUC7Q8TAX7 377 aa9.13□□□□□ -0.95
NPHP4-203ENST00000378169 LY6G6CO95867 125 aa9.13□□□□□ -0.95
NPHP4-203ENST00000378169 ESRGQ1W209 222 aa9.13□□□□□ -0.95
NPHP4-203ENST00000378169 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.12□□□□□ -0.95
NPHP4-203ENST00000378169 A0A087WVE0 104 aa9.11□□□□□ -0.95
NPHP4-203ENST00000378169 MP68P56378 58 aa9.11□□□□□ -0.95
NPHP4-203ENST00000378169 UQCRQO14949 82 aa9.11□□□□□ -0.95
NPHP4-203ENST00000378169 C10orf25Q5T742 122 aa9.11□□□□□ -0.95
NPHP4-203ENST00000378169 DHRS4-AS1Q9P1J3 65 aa9.1□□□□□ -0.95
NPHP4-203ENST00000378169 M0QXV9 152 aa9.1□□□□□ -0.95
NPHP4-203ENST00000378169 KRTAP1-3Q8IUG1 177 aa9.1□□□□□ -0.95
NPHP4-203ENST00000378169 NDUFC2O95298 119 aa9.09□□□□□ -0.95
NPHP4-203ENST00000378169 ATP5EP2Q5VTU8 51 aa9.09□□□□□ -0.95
NPHP4-203ENST00000378169 Q8NAQ8 132 aa9.09□□□□□ -0.95
NPHP4-203ENST00000378169 FAM240AA0A1B0GVK7 77 aa9.09□□□□□ -0.95
NPHP4-203ENST00000378169 UTP20O75691 2785 aaKnown RBP9.09□□□□□ -0.95
NPHP4-203ENST00000378169 CCDC179H3BU77 68 aa9.09□□□□□ -0.95
NPHP4-203ENST00000378169 SBSPONQ8IVN8 264 aa9.08□□□□□ -0.96
NPHP4-203ENST00000378169 GIG44P09565 113 aaPredicted RBP9.08□□□□□ -0.96
NPHP4-203ENST00000378169 ITPR2Q14571 2701 aa9.08□□□□□ -0.96
NPHP4-203ENST00000378169 CSNK1G2-AS1Q8NCQ2 148 aa9.08□□□□□ -0.96
NPHP4-203ENST00000378169 IMUPQ9GZP8 106 aa9.08□□□□□ -0.96
NPHP4-203ENST00000378169 PRO0461Q9UI25 63 aa9.07□□□□□ -0.96
NPHP4-203ENST00000378169 DCHS2Q6V1P9 2916 aa9.07□□□□□ -0.96
NPHP4-203ENST00000378169 EIF4EBP3O60516 100 aaPredicted RBP9.07□□□□□ -0.96
NPHP4-203ENST00000378169 ZNF575Q86XF7 245 aa9.07□□□□□ -0.96
NPHP4-203ENST00000378169 FAM218AQ96MZ4 157 aa9.06□□□□□ -0.96
NPHP4-203ENST00000378169 C4orf48Q5BLP8 95 aa9.06□□□□□ -0.96
NPHP4-203ENST00000378169 C19orf73Q9NVV2 129 aa9.06□□□□□ -0.96
NPHP4-203ENST00000378169 HRCT1Q6UXD1 115 aa9.05□□□□□ -0.96
NPHP4-203ENST00000378169 C3orf22Q8N5N4 141 aa9.05□□□□□ -0.96
NPHP4-203ENST00000378169 CDIP1Q9H305 208 aa9.05□□□□□ -0.96
NPHP4-203ENST00000378169 HRNRQ86YZ3 2850 aaPredicted RBP9.05□□□□□ -0.96
NPHP4-203ENST00000378169 KRTAP10-3P60369 221 aa9.04□□□□□ -0.96
NPHP4-203ENST00000378169 C2orf48Q96LS8 159 aa9.04□□□□□ -0.96
NPHP4-203ENST00000378169 LITAFQ99732 161 aa9.04□□□□□ -0.96
NPHP4-203ENST00000378169 LINC00846Q9NV44 126 aa9.04□□□□□ -0.96
NPHP4-203ENST00000378169 C6orf48Q9UBA6 75 aa9.04□□□□□ -0.96
NPHP4-203ENST00000378169 PLAC8L1A1L4L8 177 aa9.04□□□□□ -0.96
NPHP4-203ENST00000378169 LINC00575Q6W349 94 aa9.04□□□□□ -0.96
NPHP4-203ENST00000378169 WFDC13Q8IUB5 93 aa9.04□□□□□ -0.96
NPHP4-203ENST00000378169 LINC01561Q8N1V8 128 aa9.04□□□□□ -0.96
NPHP4-203ENST00000378169 SPINK6Q6UWN8 80 aa9.04□□□□□ -0.96
NPHP4-203ENST00000378169 SNURFQ9Y675 71 aa9.03□□□□□ -0.96
NPHP4-203ENST00000378169 IGLV9-49A0A0B4J1Y8 123 aa9.03□□□□□ -0.96
NPHP4-203ENST00000378169 SERP2Q8N6R1 65 aa9.03□□□□□ -0.96
NPHP4-203ENST00000378169 NSD1Q96L73 2696 aaPredicted RBP9.03□□□□□ -0.96
NPHP4-203ENST00000378169 LINC01556Q5JQF7 62 aa9.02□□□□□ -0.96
NPHP4-203ENST00000378169 J3KT08 172 aa9.02□□□□□ -0.97
NPHP4-203ENST00000378169 TMEM258P61165 79 aa9.02□□□□□ -0.97
NPHP4-203ENST00000378169 C1orf137Q5JT78 98 aa9.02□□□□□ -0.97
NPHP4-203ENST00000378169 Q6JHZ5 121 aa9.02□□□□□ -0.97
NPHP4-203ENST00000378169 KRTAP1-1Q07627 177 aa9.01□□□□□ -0.97
NPHP4-203ENST00000378169 NUPR2A6NF83 97 aa9.01□□□□□ -0.97
NPHP4-203ENST00000378169 NF1P21359 2839 aa9.01□□□□□ -0.97
NPHP4-203ENST00000378169 MRPL55Q7Z7F7 128 aaKnown RBP9□□□□□ -0.97
NPHP4-203ENST00000378169 REG3GQ6UW15 175 aa9□□□□□ -0.97
NPHP4-203ENST00000378169 SMG1Q96Q15 3661 aaKnown RBP9□□□□□ -0.97
NPHP4-203ENST00000378169 PRLHP81277 87 aa8.99□□□□□ -0.97
NPHP4-203ENST00000378169 COX7CP15954 63 aa8.99□□□□□ -0.97
NPHP4-203ENST00000378169 Q6Q795 121 aa8.98□□□□□ -0.97
NPHP4-203ENST00000378169 IGKV4-1P06312 121 aa8.98□□□□□ -0.97
NPHP4-203ENST00000378169 BAHCC1Q9P281 2608 aa8.97□□□□□ -0.97
NPHP4-203ENST00000378169 C22orf24Q9Y442 160 aa8.97□□□□□ -0.97
NPHP4-203ENST00000378169 C7orf33Q8WU49 177 aa8.97□□□□□ -0.97
NPHP4-203ENST00000378169 PRR4Q16378 134 aa8.96□□□□□ -0.98
NPHP4-203ENST00000378169 C5orf47Q569G3 176 aa8.96□□□□□ -0.98
NPHP4-203ENST00000378169 FAM19A3Q7Z5A8 133 aa8.96□□□□□ -0.98
NPHP4-203ENST00000378169 LINC00474Q9P2X8 69 aa8.96□□□□□ -0.98
NPHP4-203ENST00000378169 SPATA3Q8NHX4 192 aa8.95□□□□□ -0.98
NPHP4-203ENST00000378169 CELSR2Q9HCU4 2923 aa8.95□□□□□ -0.98
NPHP4-203ENST00000378169 FBN2P35556 2912 aa8.94□□□□□ -0.98
NPHP4-203ENST00000378169 FAM236DA0A1B0GTK5 79 aa8.94□□□□□ -0.98
NPHP4-203ENST00000378169 FAM236CP0DP71 79 aa8.94□□□□□ -0.98
NPHP4-203ENST00000378169 DEFB116Q30KQ4 102 aa8.94□□□□□ -0.98
NPHP4-203ENST00000378169 Q6ZVQ6 151 aa8.94□□□□□ -0.98
NPHP4-203ENST00000378169 H3BNG1 76 aa8.93□□□□□ -0.98
NPHP4-203ENST00000378169 LINC00588Q9Y4M8 146 aa8.93□□□□□ -0.98
NPHP4-203ENST00000378169 A0A087WSZ3 146 aa8.93□□□□□ -0.98
NPHP4-203ENST00000378169 KRTAP10-11P60412 298 aa8.92□□□□□ -0.98
NPHP4-203ENST00000378169 LINC00167Q96N53 147 aa8.92□□□□□ -0.98
NPHP4-203ENST00000378169 Q8N9L7 120 aa8.92□□□□□ -0.98
NPHP4-203ENST00000378169 FAM30AQ9NZY2 134 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms