RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 ATRXP46100 2492 aa11.21□□□□□ -0.61
RGP1-201ENST00000378078 F8WDY8 70 aa11.2□□□□□ -0.62
RGP1-201ENST00000378078 DSCR10P59022 87 aa11.2□□□□□ -0.62
RGP1-201ENST00000378078 LINC00588Q9Y4M8 146 aa11.2□□□□□ -0.62
RGP1-201ENST00000378078 C4orf26Q17RF5 130 aa11.19□□□□□ -0.62
RGP1-201ENST00000378078 DNAH10OSP0CZ25 163 aa11.18□□□□□ -0.62
RGP1-201ENST00000378078 BDP1A6H8Y1 2624 aa11.18□□□□□ -0.62
RGP1-201ENST00000378078 LINC00310P59036 64 aa11.17□□□□□ -0.62
RGP1-201ENST00000378078 Q8NBF4 154 aa11.17□□□□□ -0.62
RGP1-201ENST00000378078 CDIP1Q9H305 208 aa11.17□□□□□ -0.62
RGP1-201ENST00000378078 KIF25-AS1Q9Y6Z4 181 aa11.17□□□□□ -0.62
RGP1-201ENST00000378078 CXCL6P80162 114 aa11.15□□□□□ -0.62
RGP1-201ENST00000378078 OBSCN-AS1Q96MR7 158 aa11.15□□□□□ -0.62
RGP1-201ENST00000378078 FAM218AQ96MZ4 157 aa11.15□□□□□ -0.62
RGP1-201ENST00000378078 C11orf72Q8NBR9 251 aa11.15□□□□□ -0.63
RGP1-201ENST00000378078 FAM19A4Q96LR4 140 aa11.15□□□□□ -0.63
RGP1-201ENST00000378078 UTRNP46939 3433 aa11.14□□□□□ -0.63
RGP1-201ENST00000378078 ANAPC11Q9NYG5 84 aa11.14□□□□□ -0.63
RGP1-201ENST00000378078 A0A0D9SG42 100 aa11.13□□□□□ -0.63
RGP1-201ENST00000378078 WWC2-AS2Q96NR7 200 aa11.11□□□□□ -0.63
RGP1-201ENST00000378078 A0A0G2JQZ4 141 aa11.11□□□□□ -0.63
RGP1-201ENST00000378078 A0A1W2PNN7 141 aa11.11□□□□□ -0.63
RGP1-201ENST00000378078 A0A096LNJ9 63 aa11.1□□□□□ -0.63
RGP1-201ENST00000378078 TP53AIP1Q9HCN2 124 aa11.1□□□□□ -0.63
RGP1-201ENST00000378078 K7EQZ3 153 aa11.1□□□□□ -0.63
RGP1-201ENST00000378078 TRAV22A0A0B4J277 110 aa11.09□□□□□ -0.63
RGP1-201ENST00000378078 ELOF1P60002 83 aaKnown RBP11.08□□□□□ -0.64
RGP1-201ENST00000378078 BCE1O60756 84 aa11.07□□□□□ -0.64
RGP1-201ENST00000378078 TM2D3Q9BRN9 247 aa11.07□□□□□ -0.64
RGP1-201ENST00000378078 Q6ZRX8 168 aa11.07□□□□□ -0.64
RGP1-201ENST00000378078 NOTCH2Q04721 2471 aa11.06□□□□□ -0.64
RGP1-201ENST00000378078 LINC01561Q8N1V8 128 aa11.05□□□□□ -0.64
RGP1-201ENST00000378078 LINC01600Q96MT4 127 aa11.05□□□□□ -0.64
RGP1-201ENST00000378078 C9orf129Q5T035 196 aaKnown RBP11.05□□□□□ -0.64
RGP1-201ENST00000378078 C8orf87E5RJ46 101 aa11.04□□□□□ -0.64
RGP1-201ENST00000378078 IGLV5-37A0A075B6J1 123 aa11.04□□□□□ -0.64
RGP1-201ENST00000378078 IGHV3OR16-9A0A0B4J2B5 98 aa11.02□□□□□ -0.65
RGP1-201ENST00000378078 LINC00304Q8N9R0 145 aa11.01□□□□□ -0.65
RGP1-201ENST00000378078 Q6ZQT0 140 aa11.01□□□□□ -0.65
RGP1-201ENST00000378078 KRTAP10-11P60412 298 aa11□□□□□ -0.65
RGP1-201ENST00000378078 ZNF575Q86XF7 245 aa11□□□□□ -0.65
RGP1-201ENST00000378078 PIEZO2Q9H5I5 2752 aa10.99□□□□□ -0.65
RGP1-201ENST00000378078 ANKHD1Q8IWZ3 2542 aaKnown RBP10.99□□□□□ -0.65
RGP1-201ENST00000378078 CRIPTQ9P021 101 aa10.99□□□□□ -0.65
RGP1-201ENST00000378078 Q8NAQ8 132 aa10.98□□□□□ -0.65
RGP1-201ENST00000378078 TRBV7-4A0A0J9YYF1 115 aa10.97□□□□□ -0.65
RGP1-201ENST00000378078 CCDC168Q8NDH2 2452 aa10.95□□□□□ -0.66
RGP1-201ENST00000378078 C15orf56Q8N910 161 aa10.95□□□□□ -0.66
RGP1-201ENST00000378078 IGLV5-39A0A0G2JS06 123 aa10.95□□□□□ -0.66
RGP1-201ENST00000378078 M0R2T5 61 aa10.95□□□□□ -0.66
RGP1-201ENST00000378078 COA5Q86WW8 74 aa10.94□□□□□ -0.66
RGP1-201ENST00000378078 MRPL34Q9BQ48 92 aaKnown RBP10.93□□□□□ -0.66
RGP1-201ENST00000378078 COL4A2P08572 1712 aa10.93□□□□□ -0.66
RGP1-201ENST00000378078 Q8N1X5 172 aa10.91□□□□□ -0.66
RGP1-201ENST00000378078 LRRK2Q5S007 2527 aa10.91□□□□□ -0.66
RGP1-201ENST00000378078 DOPEY1Q5JWR5 2465 aa10.9□□□□□ -0.66
RGP1-201ENST00000378078 A8MWP4 228 aa10.9□□□□□ -0.66
RGP1-201ENST00000378078 CSNK1G2-AS1Q8NCQ2 148 aa10.9□□□□□ -0.66
RGP1-201ENST00000378078 RBM12B-AS1Q9P1G2 102 aa10.89□□□□□ -0.67
RGP1-201ENST00000378078 K7EIL1 84 aa10.88□□□□□ -0.67
RGP1-201ENST00000378078 GVQW2A0A096LPI5 108 aaPredicted RBP10.87□□□□□ -0.67
RGP1-201ENST00000378078 A8MUN3 132 aa10.87□□□□□ -0.67
RGP1-201ENST00000378078 SMCPP49901 116 aaPredicted RBP10.86□□□□□ -0.67
RGP1-201ENST00000378078 ACACBO00763 2458 aa10.85□□□□□ -0.67
RGP1-201ENST00000378078 IGLV1-50A0A075B6I6 118 aa10.85□□□□□ -0.67
RGP1-201ENST00000378078 COX8CQ7Z4L0 72 aa10.85□□□□□ -0.67
RGP1-201ENST00000378078 MIR22HGQ0VDD5 57 aa10.84□□□□□ -0.67
RGP1-201ENST00000378078 IGFL1Q6UW32 110 aa10.84□□□□□ -0.67
RGP1-201ENST00000378078 H3BNG1 76 aa10.83□□□□□ -0.68
RGP1-201ENST00000378078 PRO0628Q9UI54 55 aa10.83□□□□□ -0.68
RGP1-201ENST00000378078 PCSK5Q92824 1860 aa10.83□□□□□ -0.68
RGP1-201ENST00000378078 LOC101927531A0A1B0GV80 90 aa10.82□□□□□ -0.68
RGP1-201ENST00000378078 IGLV5-48A0A075B6I7 105 aa10.82□□□□□ -0.68
RGP1-201ENST00000378078 IGLV5-45A0A087WSX0 123 aa10.81□□□□□ -0.68
RGP1-201ENST00000378078 LOC110117498A0A087WWA1 95 aa10.79□□□□□ -0.68
RGP1-201ENST00000378078 VPREB1P12018 145 aa10.79□□□□□ -0.68
RGP1-201ENST00000378078 WDR87Q6ZQQ6 2873 aa10.79□□□□□ -0.68
RGP1-201ENST00000378078 C8orf17Q9NRJ1 99 aa10.78□□□□□ -0.68
RGP1-201ENST00000378078 UQCR11O14957 56 aa10.77□□□□□ -0.69
RGP1-201ENST00000378078 KRTAP10-3P60369 221 aa10.77□□□□□ -0.69
RGP1-201ENST00000378078 MYO9AB2RTY4 2548 aa10.76□□□□□ -0.69
RGP1-201ENST00000378078 LINC00528Q8N1L1 170 aa10.76□□□□□ -0.69
RGP1-201ENST00000378078 A0A087WTM6 91 aa10.76□□□□□ -0.69
RGP1-201ENST00000378078 ZNF861PO60384 105 aa10.75□□□□□ -0.69
RGP1-201ENST00000378078 CASC10Q5T4H9 136 aa10.74□□□□□ -0.69
RGP1-201ENST00000378078 LINC01546A6NGU7 62 aa10.73□□□□□ -0.69
RGP1-201ENST00000378078 H3BPC8 53 aa10.73□□□□□ -0.69
RGP1-201ENST00000378078 C2CD3Q4AC94 2353 aa10.72□□□□□ -0.69
RGP1-201ENST00000378078 A0A1B0GVX0 72 aa10.72□□□□□ -0.69
RGP1-201ENST00000378078 PRR15Q8IV56 129 aa10.72□□□□□ -0.69
RGP1-201ENST00000378078 NAV2Q8IVL1 2488 aa10.71□□□□□ -0.7
RGP1-201ENST00000378078 PSORS1C2Q9UIG4 136 aa10.69□□□□□ -0.7
RGP1-201ENST00000378078 CENPFP49454 3210 aa10.68□□□□□ -0.7
RGP1-201ENST00000378078 IGLV7-43P04211 117 aa10.68□□□□□ -0.7
RGP1-201ENST00000378078 Q6ZSA8 131 aa10.68□□□□□ -0.7
RGP1-201ENST00000378078 IGF2RP11717 2491 aa10.66□□□□□ -0.7
RGP1-201ENST00000378078 CACNA1AO00555 2505 aa10.66□□□□□ -0.7
RGP1-201ENST00000378078 CAMK2N1Q7Z7J9 78 aa10.65□□□□□ -0.71
RGP1-201ENST00000378078 LINC00336Q6ZUF6 198 aa10.64□□□□□ -0.71
RGP1-201ENST00000378078 Q8N377 158 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 151.2 ms