RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 CHTF8P0CG12 524 aa9.36□□□□□ -0.91
GPC6-201ENST00000377047 IGKV2D-30A0A075B6S6 120 aa9.35□□□□□ -0.91
GPC6-201ENST00000377047 IGKV2-30P06310 120 aa9.35□□□□□ -0.91
GPC6-201ENST00000377047 Q9UF83 564 aa9.34□□□□□ -0.91
GPC6-201ENST00000377047 CENPFP49454 3210 aa9.33□□□□□ -0.92
GPC6-201ENST00000377047 LINC01546A6NGU7 62 aa9.33□□□□□ -0.92
GPC6-201ENST00000377047 SPTBN4Q9H254 2564 aa9.32□□□□□ -0.92
GPC6-201ENST00000377047 PCSK5Q92824 1860 aa9.32□□□□□ -0.92
GPC6-201ENST00000377047 TRBV7-7A0A0K0K1E9 115 aa9.32□□□□□ -0.92
GPC6-201ENST00000377047 LINC00846Q9NV44 126 aa9.31□□□□□ -0.92
GPC6-201ENST00000377047 CHD8Q9HCK8 2581 aa9.31□□□□□ -0.92
GPC6-201ENST00000377047 Q6ZRP5 223 aa9.3□□□□□ -0.92
GPC6-201ENST00000377047 SOSTDC1Q6X4U4 206 aa9.29□□□□□ -0.92
GPC6-201ENST00000377047 TYMSOSQ8TAI1 123 aa9.29□□□□□ -0.92
GPC6-201ENST00000377047 CRYGAP11844 174 aa9.28□□□□□ -0.92
GPC6-201ENST00000377047 SPATA3Q8NHX4 192 aa9.28□□□□□ -0.92
GPC6-201ENST00000377047 EPM2AB3EWF7 344 aa9.27□□□□□ -0.93
GPC6-201ENST00000377047 C7orf65Q6ZTY9 151 aa9.27□□□□□ -0.93
GPC6-201ENST00000377047 SETD2Q9BYW2 2564 aaPredicted RBP9.27□□□□□ -0.93
GPC6-201ENST00000377047 IGLV5-45A0A087WSX0 123 aa9.26□□□□□ -0.93
GPC6-201ENST00000377047 C1orf64Q8NEQ6 169 aa9.26□□□□□ -0.93
GPC6-201ENST00000377047 SMIM26A0A096LP01 95 aa9.25□□□□□ -0.93
GPC6-201ENST00000377047 ELOF1P60002 83 aaKnown RBP9.25□□□□□ -0.93
GPC6-201ENST00000377047 KRTAP10-11P60412 298 aa9.25□□□□□ -0.93
GPC6-201ENST00000377047 GOLGB1Q14789 3259 aaKnown RBP9.25□□□□□ -0.93
GPC6-201ENST00000377047 SMIM29Q86T20 159 aa9.24□□□□□ -0.93
GPC6-201ENST00000377047 CXCL6P80162 114 aa9.24□□□□□ -0.93
GPC6-201ENST00000377047 USP9YO00507 2555 aaPredicted RBP9.24□□□□□ -0.93
GPC6-201ENST00000377047 Q8NBF4 154 aa9.24□□□□□ -0.93
GPC6-201ENST00000377047 Q6ZRX8 168 aa9.24□□□□□ -0.93
GPC6-201ENST00000377047 GVQW2A0A096LPI5 108 aaPredicted RBP9.24□□□□□ -0.93
GPC6-201ENST00000377047 PLA2G1BP04054 148 aaKnown RBP9.24□□□□□ -0.93
GPC6-201ENST00000377047 ANKRD17O75179 2603 aaKnown RBP9.23□□□□□ -0.93
GPC6-201ENST00000377047 K7EIL1 84 aa9.23□□□□□ -0.93
GPC6-201ENST00000377047 J3QL48 77 aa9.23□□□□□ -0.93
GPC6-201ENST00000377047 TMEM254Q8TBM7 123 aa9.23□□□□□ -0.93
GPC6-201ENST00000377047 hDV103S1A0JD37 113 aa9.23□□□□□ -0.93
GPC6-201ENST00000377047 MUC4Q99102 2169 aa9.23□□□□□ -0.93
GPC6-201ENST00000377047 DNAH10OSP0CZ25 163 aa9.22□□□□□ -0.93
GPC6-201ENST00000377047 LINC00476Q8WZB0 136 aa9.22□□□□□ -0.93
GPC6-201ENST00000377047 RPL37AP61513 92 aaKnown RBP9.22□□□□□ -0.93
GPC6-201ENST00000377047 ST20-AS1Q8NBB2 130 aa9.22□□□□□ -0.93
GPC6-201ENST00000377047 BCE1O60756 84 aa9.2□□□□□ -0.94
GPC6-201ENST00000377047 FAM218AQ96MZ4 157 aa9.2□□□□□ -0.94
GPC6-201ENST00000377047 FAM168BA1KXE4 195 aa9.19□□□□□ -0.94
GPC6-201ENST00000377047 PSPHP1O15172 72 aa9.19□□□□□ -0.94
GPC6-201ENST00000377047 LINC00313P59037 77 aa9.19□□□□□ -0.94
GPC6-201ENST00000377047 FASNP49327 2511 aaKnown RBP9.17□□□□□ -0.94
GPC6-201ENST00000377047 KRTAP10-3P60369 221 aa9.17□□□□□ -0.94
GPC6-201ENST00000377047 TP53AIP1Q9HCN2 124 aa9.16□□□□□ -0.94
GPC6-201ENST00000377047 KLK9Q2XQG4 91 aa9.16□□□□□ -0.94
GPC6-201ENST00000377047 CSNK1G2-AS1Q8NCQ2 148 aa9.16□□□□□ -0.94
GPC6-201ENST00000377047 MTORP42345 2549 aa9.16□□□□□ -0.94
GPC6-201ENST00000377047 POLQO75417 2590 aa9.15□□□□□ -0.94
GPC6-201ENST00000377047 A0A096LNT2 108 aa9.14□□□□□ -0.95
GPC6-201ENST00000377047 Q96NJ1 140 aa9.14□□□□□ -0.95
GPC6-201ENST00000377047 PKD1L2Q7Z442 2459 aa9.14□□□□□ -0.95
GPC6-201ENST00000377047 C19orf73Q9NVV2 129 aa9.13□□□□□ -0.95
GPC6-201ENST00000377047 Q6ZQT0 140 aa9.12□□□□□ -0.95
GPC6-201ENST00000377047 SERTAD4-AS1Q5TG53 156 aa9.11□□□□□ -0.95
GPC6-201ENST00000377047 ATP11AUNQ6ZP68 121 aa9.11□□□□□ -0.95
GPC6-201ENST00000377047 ACANP16112 2415 aa9.11□□□□□ -0.95
GPC6-201ENST00000377047 PMAIP1Q13794 54 aa9.11□□□□□ -0.95
GPC6-201ENST00000377047 VPREB1P12018 145 aa9.1□□□□□ -0.95
GPC6-201ENST00000377047 ACYP2P14621 99 aa9.1□□□□□ -0.95
GPC6-201ENST00000377047 A0A1B0GW54 56 aa9.1□□□□□ -0.95
GPC6-201ENST00000377047 C1orf195Q5TG92 126 aa9.09□□□□□ -0.95
GPC6-201ENST00000377047 LOC110117498A0A087WWA1 95 aa9.07□□□□□ -0.96
GPC6-201ENST00000377047 A0A1B0GU69 56 aa9.07□□□□□ -0.96
GPC6-201ENST00000377047 CDIP1Q9H305 208 aa9.07□□□□□ -0.96
GPC6-201ENST00000377047 IGLV6-57P01721 117 aa9.06□□□□□ -0.96
GPC6-201ENST00000377047 IGLV1-50A0A075B6I6 118 aa9.06□□□□□ -0.96
GPC6-201ENST00000377047 SMCPP49901 116 aaPredicted RBP9.05□□□□□ -0.96
GPC6-201ENST00000377047 SMR3BP02814 79 aaPredicted RBP9.05□□□□□ -0.96
GPC6-201ENST00000377047 F8P00451 2351 aa9.04□□□□□ -0.96
GPC6-201ENST00000377047 A0A087WTM6 91 aa9.03□□□□□ -0.96
GPC6-201ENST00000377047 C15orf56Q8N910 161 aa9.02□□□□□ -0.96
GPC6-201ENST00000377047 TM2D3Q9BRN9 247 aa9.02□□□□□ -0.96
GPC6-201ENST00000377047 TRAV22A0A0B4J277 110 aa9.02□□□□□ -0.97
GPC6-201ENST00000377047 GIG44P09565 113 aaPredicted RBP9.02□□□□□ -0.97
GPC6-201ENST00000377047 TRBV7-4A0A0J9YYF1 115 aa9.01□□□□□ -0.97
GPC6-201ENST00000377047 KRTAP1-3Q8IUG1 177 aa9.01□□□□□ -0.97
GPC6-201ENST00000377047 LITAFQ99732 161 aa9.01□□□□□ -0.97
GPC6-201ENST00000377047 COX6B2Q6YFQ2 88 aa9.01□□□□□ -0.97
GPC6-201ENST00000377047 LINC00304Q8N9R0 145 aa9□□□□□ -0.97
GPC6-201ENST00000377047 C8orf87E5RJ46 101 aa9□□□□□ -0.97
GPC6-201ENST00000377047 KCNQ1DNQ9H478 68 aa8.99□□□□□ -0.97
GPC6-201ENST00000377047 SPAG11AQ6PDA7 123 aa8.99□□□□□ -0.97
GPC6-201ENST00000377047 PRR34Q9NV39 138 aa8.99□□□□□ -0.97
GPC6-201ENST00000377047 A8MWP4 228 aa8.98□□□□□ -0.97
GPC6-201ENST00000377047 ZNF861PO60384 105 aa8.97□□□□□ -0.97
GPC6-201ENST00000377047 H3BPC8 53 aa8.97□□□□□ -0.97
GPC6-201ENST00000377047 C9orf92A6NGG3 77 aa8.97□□□□□ -0.97
GPC6-201ENST00000377047 PRO0461Q9UI25 63 aa8.97□□□□□ -0.97
GPC6-201ENST00000377047 C9orf129Q5T035 196 aaKnown RBP8.96□□□□□ -0.98
GPC6-201ENST00000377047 DSCR10P59022 87 aa8.96□□□□□ -0.98
GPC6-201ENST00000377047 MRPL34Q9BQ48 92 aaKnown RBP8.95□□□□□ -0.98
GPC6-201ENST00000377047 IGLV8-61A0A075B6I0 122 aa8.95□□□□□ -0.98
GPC6-201ENST00000377047 KRTAP1-1Q07627 177 aa8.95□□□□□ -0.98
GPC6-201ENST00000377047 K7EQZ3 153 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms