RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 IGKV2D-26A0A0A0MRZ7 120 aa8.14□□□□□ -1.11
CLCN6-205ENST00000376492 MYMXA0A1B0GTQ4 84 aa8.14□□□□□ -1.11
CLCN6-205ENST00000376492 RNF151Q2KHN1 245 aa8.14□□□□□ -1.11
CLCN6-205ENST00000376492 REG3GQ6UW15 175 aa8.14□□□□□ -1.11
CLCN6-205ENST00000376492 SPINK6Q6UWN8 80 aa8.14□□□□□ -1.11
CLCN6-205ENST00000376492 LINC00474Q9P2X8 69 aa8.14□□□□□ -1.11
CLCN6-205ENST00000376492 NDUFA1O15239 70 aa8.13□□□□□ -1.11
CLCN6-205ENST00000376492 SPINK8P0C7L1 97 aa8.13□□□□□ -1.11
CLCN6-205ENST00000376492 KIAA0087Q14695 138 aa8.13□□□□□ -1.11
CLCN6-205ENST00000376492 TIMM17BO60830 172 aa8.12□□□□□ -1.11
CLCN6-205ENST00000376492 Q6ZVH6 145 aa8.12□□□□□ -1.11
CLCN6-205ENST00000376492 COX7B2Q8TF08 81 aa8.12□□□□□ -1.11
CLCN6-205ENST00000376492 PPDPFQ9H3Y8 114 aa8.12□□□□□ -1.11
CLCN6-205ENST00000376492 LOC107984640A0A0U1RRK4 108 aa8.11□□□□□ -1.11
CLCN6-205ENST00000376492 PRSS2P07478 247 aa8.11□□□□□ -1.11
CLCN6-205ENST00000376492 SRSF9Q13242 221 aaKnown RBP eCLIP8.11□□□□□ -1.11
CLCN6-205ENST00000376492 ZNF625Q96I27 306 aaPredicted RBP8.11□□□□□ -1.11
CLCN6-205ENST00000376492 C14orf144Q96I85 54 aa8.11□□□□□ -1.11
CLCN6-205ENST00000376492 NDUFA12Q9UI09 145 aa8.11□□□□□ -1.11
CLCN6-205ENST00000376492 ZNF815PA8K554 130 aa8.1□□□□□ -1.11
CLCN6-205ENST00000376492 PTTG1IPP53801 180 aa8.1□□□□□ -1.11
CLCN6-205ENST00000376492 TAL2Q16559 108 aa8.1□□□□□ -1.11
CLCN6-205ENST00000376492 C6orf226Q5I0X4 101 aa8.1□□□□□ -1.11
CLCN6-205ENST00000376492 PCP2Q8IVA1 136 aa8.1□□□□□ -1.11
CLCN6-205ENST00000376492 MUC2Q02817 5179 aa8.1□□□□□ -1.11
CLCN6-205ENST00000376492 A0A0J9YXY3 114 aa8.09□□□□□ -1.11
CLCN6-205ENST00000376492 DDTP30046 118 aa8.09□□□□□ -1.11
CLCN6-205ENST00000376492 COX17Q14061 63 aa8.09□□□□□ -1.11
CLCN6-205ENST00000376492 C10orf25Q5T742 122 aa8.09□□□□□ -1.11
CLCN6-205ENST00000376492 UNQ6190/PRO20217Q6UXQ8 127 aa8.09□□□□□ -1.11
CLCN6-205ENST00000376492 SPANXB1Q9NS25 103 aaPredicted RBP8.09□□□□□ -1.11
CLCN6-205ENST00000376492 TSPEAR-AS2P59090 65 aa8.08□□□□□ -1.12
CLCN6-205ENST00000376492 GAGE2BQ13066 116 aa8.08□□□□□ -1.12
CLCN6-205ENST00000376492 COPS9Q8WXC6 57 aa8.08□□□□□ -1.12
CLCN6-205ENST00000376492 C6orf48Q9UBA6 75 aa8.08□□□□□ -1.12
CLCN6-205ENST00000376492 TRBV30A0A0K0K1B3 111 aa8.07□□□□□ -1.12
CLCN6-205ENST00000376492 TMEM238C9JI98 176 aa8.07□□□□□ -1.12
CLCN6-205ENST00000376492 TLX1NBP0CAT3 122 aa8.07□□□□□ -1.12
CLCN6-205ENST00000376492 CKS1BP61024 79 aa8.07□□□□□ -1.12
CLCN6-205ENST00000376492 SCGB1D4Q6XE38 83 aa8.07□□□□□ -1.12
CLCN6-205ENST00000376492 Q6ZRP5 223 aa8.07□□□□□ -1.12
CLCN6-205ENST00000376492 PRO1933Q9H354 126 aa8.07□□□□□ -1.12
CLCN6-205ENST00000376492 C2orf82Q6UX34 121 aa8.06□□□□□ -1.12
CLCN6-205ENST00000376492 TP73-AS1Q9UF72 201 aa8.06□□□□□ -1.12
CLCN6-205ENST00000376492 RPL18AQ02543 176 aaKnown RBP8.05□□□□□ -1.12
CLCN6-205ENST00000376492 C2orf91Q6ZV80 131 aa8.05□□□□□ -1.12
CLCN6-205ENST00000376492 A0A1W2PNN7 141 aa8.04□□□□□ -1.12
CLCN6-205ENST00000376492 IFITM1P13164 125 aa8.04□□□□□ -1.12
CLCN6-205ENST00000376492 HSD52Q0P140 79 aa8.04□□□□□ -1.12
CLCN6-205ENST00000376492 SPANXDQ9BXN6 97 aa8.04□□□□□ -1.12
CLCN6-205ENST00000376492 SPANXCQ9NY87 97 aa8.04□□□□□ -1.12
CLCN6-205ENST00000376492 TOMM7Q9P0U1 55 aa8.04□□□□□ -1.12
CLCN6-205ENST00000376492 TTTY13Q9BZ97 58 aa8.03□□□□□ -1.12
CLCN6-205ENST00000376492 LOC107984156A0A0G2JMH3 177 aa8.02□□□□□ -1.13
CLCN6-205ENST00000376492 NDUFC2-KCTD14E9PQ53 114 aa8.02□□□□□ -1.13
CLCN6-205ENST00000376492 M0R143 59 aa8.02□□□□□ -1.13
CLCN6-205ENST00000376492 C9orf116Q5BN46 136 aaPredicted RBP8.02□□□□□ -1.13
CLCN6-205ENST00000376492 ARL17AQ8IVW1 177 aa8.02□□□□□ -1.13
CLCN6-205ENST00000376492 LITAFQ99732 161 aa8.02□□□□□ -1.13
CLCN6-205ENST00000376492 KRTAP9-2Q9BYQ4 174 aa8.01□□□□□ -1.13
CLCN6-205ENST00000376492 ERG28Q9UKR5 140 aa8.01□□□□□ -1.13
CLCN6-205ENST00000376492 GAGE2EQ4V326 116 aa8□□□□□ -1.13
CLCN6-205ENST00000376492 MEIG1Q5JSS6 88 aa8□□□□□ -1.13
CLCN6-205ENST00000376492 GAGE2DQ9UEU5 116 aa8□□□□□ -1.13
CLCN6-205ENST00000376492 TMEM238LA0A1B0GVL6 79 aa7.99□□□□□ -1.13
CLCN6-205ENST00000376492 A6NJY4 79 aa7.99□□□□□ -1.13
CLCN6-205ENST00000376492 CTAG1AP78358 180 aa7.99□□□□□ -1.13
CLCN6-205ENST00000376492 LBHQ53QV2 105 aaPredicted RBP7.99□□□□□ -1.13
CLCN6-205ENST00000376492 PRR26Q8N8Z3 221 aa7.99□□□□□ -1.13
CLCN6-205ENST00000376492 HIST1H4GQ99525 98 aa7.99□□□□□ -1.13
CLCN6-205ENST00000376492 PSORS1C2Q9UIG4 136 aa7.99□□□□□ -1.13
CLCN6-205ENST00000376492 RPL24P83731 157 aaKnown RBP7.98□□□□□ -1.13
CLCN6-205ENST00000376492 CEND1Q8N111 149 aa7.98□□□□□ -1.13
CLCN6-205ENST00000376492 FAM168BA1KXE4 195 aa7.97□□□□□ -1.13
CLCN6-205ENST00000376492 C9orf129Q5T035 196 aaKnown RBP7.97□□□□□ -1.13
CLCN6-205ENST00000376492 KRTAP7-1Q8IUC3 87 aa7.96□□□□□ -1.14
CLCN6-205ENST00000376492 PCP4L1A6NKN8 68 aa7.95□□□□□ -1.14
CLCN6-205ENST00000376492 SMIM13P0DJ93 91 aa7.95□□□□□ -1.14
CLCN6-205ENST00000376492 LINC00158P58513 81 aa7.95□□□□□ -1.14
CLCN6-205ENST00000376492 C1orf137Q5JT78 98 aa7.95□□□□□ -1.14
CLCN6-205ENST00000376492 BVES-AS1Q5T3Y7 98 aa7.95□□□□□ -1.14
CLCN6-205ENST00000376492 ADAMTSL4-AS1Q5T5F5 129 aa7.95□□□□□ -1.14
CLCN6-205ENST00000376492 PHF5AQ7RTV0 110 aaKnown RBP7.95□□□□□ -1.14
CLCN6-205ENST00000376492 LINC00308Q8TCZ7 52 aa7.95□□□□□ -1.14
CLCN6-205ENST00000376492 A6NDN8 102 aa7.94□□□□□ -1.14
CLCN6-205ENST00000376492 NDUFC2O95298 119 aa7.94□□□□□ -1.14
CLCN6-205ENST00000376492 MIR7-3HGQ8N6C7 128 aa7.94□□□□□ -1.14
CLCN6-205ENST00000376492 FAT4Q6V0I7 4981 aa7.93□□□□□ -1.14
CLCN6-205ENST00000376492 A0A1B0GWB2 263 aa7.93□□□□□ -1.14
CLCN6-205ENST00000376492 FAM19A5Q7Z5A7 132 aaPredicted RBP7.93□□□□□ -1.14
CLCN6-205ENST00000376492 MUSTN1Q8IVN3 82 aa7.92□□□□□ -1.14
CLCN6-205ENST00000376492 XAGE1AQ9HD64 81 aa7.92□□□□□ -1.14
CLCN6-205ENST00000376492 A0A0B4J2C4 111 aa7.91□□□□□ -1.14
CLCN6-205ENST00000376492 IGLV7-43P04211 117 aa7.91□□□□□ -1.14
CLCN6-205ENST00000376492 PFN2P35080 140 aa7.91□□□□□ -1.14
CLCN6-205ENST00000376492 KRTAP11-1Q8IUC1 163 aa7.91□□□□□ -1.14
CLCN6-205ENST00000376492 DIRC1Q969H9 104 aa7.91□□□□□ -1.14
CLCN6-205ENST00000376492 M0QXV9 152 aa7.9□□□□□ -1.14
CLCN6-205ENST00000376492 PRR4Q16378 134 aa7.9□□□□□ -1.14
CLCN6-205ENST00000376492 SNHG12Q9BXW3 62 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 229.1 ms