RNA–Protein interactions for RNA: ENST00000374607.5

PFDN6-202, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-202ENST00000374607 UBE2BP63146 152 aa9.58□□□□□ -0.88
PFDN6-202ENST00000374607 NKAPP1Q8N9T2 125 aa9.58□□□□□ -0.88
PFDN6-202ENST00000374607 SND1-IT1Q9HBX3 110 aa9.58□□□□□ -0.88
PFDN6-202ENST00000374607 PHF5AQ7RTV0 110 aaKnown RBP9.57□□□□□ -0.88
PFDN6-202ENST00000374607 RPL24P83731 157 aaKnown RBP9.56□□□□□ -0.88
PFDN6-202ENST00000374607 LBHQ53QV2 105 aaPredicted RBP9.56□□□□□ -0.88
PFDN6-202ENST00000374607 MIR7-3HGQ8N6C7 128 aa9.56□□□□□ -0.88
PFDN6-202ENST00000374607 MIEN1Q9BRT3 115 aa9.56□□□□□ -0.88
PFDN6-202ENST00000374607 IGKV2D-26A0A0A0MRZ7 120 aa9.55□□□□□ -0.88
PFDN6-202ENST00000374607 SERTAD4-AS1Q5TG53 156 aa9.55□□□□□ -0.88
PFDN6-202ENST00000374607 SCGB1D4Q6XE38 83 aa9.55□□□□□ -0.88
PFDN6-202ENST00000374607 C22orf24Q9Y442 160 aa9.55□□□□□ -0.88
PFDN6-202ENST00000374607 DNAH8Q96JB1 4490 aa9.54□□□□□ -0.88
PFDN6-202ENST00000374607 A0A0J9YXY3 114 aa9.54□□□□□ -0.88
PFDN6-202ENST00000374607 ANKRD39Q53RE8 183 aa9.54□□□□□ -0.88
PFDN6-202ENST00000374607 SMCPP49901 116 aaPredicted RBP9.53□□□□□ -0.88
PFDN6-202ENST00000374607 PLA2G2DQ9UNK4 145 aa9.53□□□□□ -0.88
PFDN6-202ENST00000374607 TMEM238LA0A1B0GVL6 79 aa9.52□□□□□ -0.89
PFDN6-202ENST00000374607 MRPL55Q7Z7F7 128 aaKnown RBP9.52□□□□□ -0.89
PFDN6-202ENST00000374607 BOD1L2Q8IYS8 172 aa9.52□□□□□ -0.89
PFDN6-202ENST00000374607 DAND5Q8N907 189 aa9.52□□□□□ -0.89
PFDN6-202ENST00000374607 TTTY13Q9BZ97 58 aa9.52□□□□□ -0.89
PFDN6-202ENST00000374607 TP73-AS1Q9UF72 201 aa9.51□□□□□ -0.89
PFDN6-202ENST00000374607 GAGE10A6NGK3 116 aa9.5□□□□□ -0.89
PFDN6-202ENST00000374607 NPC2P61916 151 aa9.5□□□□□ -0.89
PFDN6-202ENST00000374607 INAFM2P0DMQ5 153 aa9.49□□□□□ -0.89
PFDN6-202ENST00000374607 KRTAP7-1Q8IUC3 87 aa9.49□□□□□ -0.89
PFDN6-202ENST00000374607 FAT1Q14517 4588 aa9.48□□□□□ -0.89
PFDN6-202ENST00000374607 TMEM238C9JI98 176 aa9.48□□□□□ -0.89
PFDN6-202ENST00000374607 TIMM17BO60830 172 aa9.48□□□□□ -0.89
PFDN6-202ENST00000374607 PRR3P79522 188 aaKnown RBP9.48□□□□□ -0.89
PFDN6-202ENST00000374607 JOSD1Q15040 202 aaPredicted RBP9.48□□□□□ -0.89
PFDN6-202ENST00000374607 C1orf137Q5JT78 98 aa9.48□□□□□ -0.89
PFDN6-202ENST00000374607 PCP2Q8IVA1 136 aa9.48□□□□□ -0.89
PFDN6-202ENST00000374607 IGLV5-37A0A075B6J1 123 aa9.47□□□□□ -0.89
PFDN6-202ENST00000374607 RPL37AP8A6NKH3 93 aa9.47□□□□□ -0.89
PFDN6-202ENST00000374607 VPREB1P12018 145 aa9.47□□□□□ -0.89
PFDN6-202ENST00000374607 LINC00167Q96N53 147 aa9.47□□□□□ -0.89
PFDN6-202ENST00000374607 VAMP8Q9BV40 100 aa9.47□□□□□ -0.89
PFDN6-202ENST00000374607 PSORS1C2Q9UIG4 136 aa9.47□□□□□ -0.89
PFDN6-202ENST00000374607 ADAMTSL4-AS1Q5T5F5 129 aa9.46□□□□□ -0.9
PFDN6-202ENST00000374607 COPS9Q8WXC6 57 aa9.46□□□□□ -0.9
PFDN6-202ENST00000374607 PAM16Q9Y3D7 125 aa9.46□□□□□ -0.9
PFDN6-202ENST00000374607 M0R378 163 aa9.45□□□□□ -0.9
PFDN6-202ENST00000374607 NCR3O14931 201 aa9.45□□□□□ -0.9
PFDN6-202ENST00000374607 IGKV2-28A0A075B6P5 120 aa9.44□□□□□ -0.9
PFDN6-202ENST00000374607 IGKV2D-28P01615 120 aa9.44□□□□□ -0.9
PFDN6-202ENST00000374607 S100A12P80511 92 aa9.44□□□□□ -0.9
PFDN6-202ENST00000374607 SPATA45Q537H7 98 aa9.44□□□□□ -0.9
PFDN6-202ENST00000374607 VPS13BQ7Z7G8 4022 aa9.42□□□□□ -0.9
PFDN6-202ENST00000374607 SRSF9Q13242 221 aaKnown RBP eCLIP9.42□□□□□ -0.9
PFDN6-202ENST00000374607 LINC00308Q8TCZ7 52 aa9.42□□□□□ -0.9
PFDN6-202ENST00000374607 LOC107984156A0A0G2JMH3 177 aa9.41□□□□□ -0.9
PFDN6-202ENST00000374607 S100A7L2Q5SY68 101 aa9.41□□□□□ -0.9
PFDN6-202ENST00000374607 ARL17AQ8IVW1 177 aa9.41□□□□□ -0.9
PFDN6-202ENST00000374607 Q8NDZ9 215 aa9.41□□□□□ -0.9
PFDN6-202ENST00000374607 LITAFQ99732 161 aa9.41□□□□□ -0.9
PFDN6-202ENST00000374607 SPANXDQ9BXN6 97 aa9.41□□□□□ -0.9
PFDN6-202ENST00000374607 SPANXB1Q9NS25 103 aaPredicted RBP9.41□□□□□ -0.9
PFDN6-202ENST00000374607 SPANXCQ9NY87 97 aa9.41□□□□□ -0.9
PFDN6-202ENST00000374607 NDUFC2O95298 119 aa9.4□□□□□ -0.9
PFDN6-202ENST00000374607 KRTAP10-4P60372 401 aaPredicted RBP9.4□□□□□ -0.9
PFDN6-202ENST00000374607 Q6ZVH6 145 aa9.4□□□□□ -0.9
PFDN6-202ENST00000374607 KRTAP11-1Q8IUC1 163 aa9.4□□□□□ -0.9
PFDN6-202ENST00000374607 IGLV1-50A0A075B6I6 118 aa9.39□□□□□ -0.91
PFDN6-202ENST00000374607 IGLV7-43P04211 117 aa9.39□□□□□ -0.91
PFDN6-202ENST00000374607 COX8AP10176 69 aa9.39□□□□□ -0.91
PFDN6-202ENST00000374607 IFITM1P13164 125 aa9.39□□□□□ -0.91
PFDN6-202ENST00000374607 PYY3Q5JQD4 70 aa9.39□□□□□ -0.91
PFDN6-202ENST00000374607 SOSTDC1Q6X4U4 206 aa9.39□□□□□ -0.91
PFDN6-202ENST00000374607 C14orf144Q96I85 54 aa9.39□□□□□ -0.91
PFDN6-202ENST00000374607 TRBV10-2A0A0K0K1G8 114 aa9.38□□□□□ -0.91
PFDN6-202ENST00000374607 UBE2AP49459 152 aa9.38□□□□□ -0.91
PFDN6-202ENST00000374607 REG3GQ6UW15 175 aa9.38□□□□□ -0.91
PFDN6-202ENST00000374607 SPINK6Q6UWN8 80 aa9.38□□□□□ -0.91
PFDN6-202ENST00000374607 SRRM2Q9UQ35 2752 aaKnown RBP9.38□□□□□ -0.91
PFDN6-202ENST00000374607 BCE1O60756 84 aa9.37□□□□□ -0.91
PFDN6-202ENST00000374607 DDTP30046 118 aa9.37□□□□□ -0.91
PFDN6-202ENST00000374607 OR13C6PQ8NH95 151 aa9.37□□□□□ -0.91
PFDN6-202ENST00000374607 HNRNPA3P51991 378 aaKnown RBP9.36□□□□□ -0.91
PFDN6-202ENST00000374607 SLC25A34Q6PIV7 304 aa9.36□□□□□ -0.91
PFDN6-202ENST00000374607 MUSTN1Q8IVN3 82 aa9.36□□□□□ -0.91
PFDN6-202ENST00000374607 FLG2Q5D862 2391 aaPredicted RBP9.36□□□□□ -0.91
PFDN6-202ENST00000374607 TRBV10-3A0A0K0K1G6 114 aa9.35□□□□□ -0.91
PFDN6-202ENST00000374607 DLEU1O43261 78 aa9.35□□□□□ -0.91
PFDN6-202ENST00000374607 EIF4EBP3O60516 100 aaPredicted RBP9.35□□□□□ -0.91
PFDN6-202ENST00000374607 RPL28P46779 137 aaKnown RBP9.35□□□□□ -0.91
PFDN6-202ENST00000374607 FAM19A1Q7Z5A9 133 aa9.35□□□□□ -0.91
PFDN6-202ENST00000374607 LINC00518Q8N0U6 118 aa9.35□□□□□ -0.91
PFDN6-202ENST00000374607 HIST1H4GQ99525 98 aa9.35□□□□□ -0.91
PFDN6-202ENST00000374607 TMEM126AQ9H061 195 aa9.35□□□□□ -0.91
PFDN6-202ENST00000374607 CBY1Q9Y3M2 126 aa9.35□□□□□ -0.91
PFDN6-202ENST00000374607 PRYO14603 147 aa9.34□□□□□ -0.91
PFDN6-202ENST00000374607 DIRC1Q969H9 104 aa9.34□□□□□ -0.91
PFDN6-202ENST00000374607 DMBT1Q9UGM3 2413 aaPredicted RBP9.32□□□□□ -0.92
PFDN6-202ENST00000374607 ETDCA0A1B0GVM5 59 aa9.32□□□□□ -0.92
PFDN6-202ENST00000374607 ZNF861PO60384 105 aa9.32□□□□□ -0.92
PFDN6-202ENST00000374607 KCNQ1DNQ9H478 68 aa9.31□□□□□ -0.92
PFDN6-202ENST00000374607 A6NDN8 102 aa9.3□□□□□ -0.92
PFDN6-202ENST00000374607 HINT1P49773 126 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 150.5 ms