RNA–Protein interactions for RNA: ENST00000373163.5

TRAPPC3-203, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 951 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-203ENST00000373163 IGLV8-61A0A075B6I0 122 aa8.62□□□□□ -1.03
TRAPPC3-203ENST00000373163 Q8N377 158 aa8.62□□□□□ -1.03
TRAPPC3-203ENST00000373163 PCOTHQ58A44 107 aa8.61□□□□□ -1.03
TRAPPC3-203ENST00000373163 ZNF706Q9Y5V0 76 aaPredicted RBP8.61□□□□□ -1.03
TRAPPC3-203ENST00000373163 SMIM27A0A1W2PRY6 76 aa8.6□□□□□ -1.03
TRAPPC3-203ENST00000373163 SMIM1B2RUZ4 78 aa8.6□□□□□ -1.03
TRAPPC3-203ENST00000373163 ORMDL3Q8N138 153 aa8.6□□□□□ -1.03
TRAPPC3-203ENST00000373163 COX7B2Q8TF08 81 aa8.6□□□□□ -1.03
TRAPPC3-203ENST00000373163 NPSP0C0P6 89 aa8.59□□□□□ -1.03
TRAPPC3-203ENST00000373163 VPREB1P12018 145 aa8.59□□□□□ -1.03
TRAPPC3-203ENST00000373163 NDUFA6P56556 154 aa8.59□□□□□ -1.03
TRAPPC3-203ENST00000373163 RPS29P62273 56 aaKnown RBP8.59□□□□□ -1.03
TRAPPC3-203ENST00000373163 IGIPA6NJ69 53 aa8.58□□□□□ -1.04
TRAPPC3-203ENST00000373163 PYY3Q5JQD4 70 aa8.58□□□□□ -1.04
TRAPPC3-203ENST00000373163 MRPL54Q6P161 138 aaKnown RBP8.58□□□□□ -1.04
TRAPPC3-203ENST00000373163 HIST3H2BBQ8N257 126 aa8.58□□□□□ -1.04
TRAPPC3-203ENST00000373163 PRELID3AQ96N28 172 aa8.58□□□□□ -1.04
TRAPPC3-203ENST00000373163 LOC389332A0A1B0GUA5 103 aa8.57□□□□□ -1.04
TRAPPC3-203ENST00000373163 SLC25A20O43772 301 aa8.57□□□□□ -1.04
TRAPPC3-203ENST00000373163 HIST1H2BKO60814 126 aa8.57□□□□□ -1.04
TRAPPC3-203ENST00000373163 HIST1H2BJP06899 126 aa8.57□□□□□ -1.04
TRAPPC3-203ENST00000373163 HIST1H2BOP23527 126 aa8.57□□□□□ -1.04
TRAPPC3-203ENST00000373163 HIST1H2BBP33778 126 aa8.57□□□□□ -1.04
TRAPPC3-203ENST00000373163 HIST1H2BDP58876 126 aa8.57□□□□□ -1.04
TRAPPC3-203ENST00000373163 HIST1H2BCP62807 126 aa8.57□□□□□ -1.04
TRAPPC3-203ENST00000373163 HIST2H2BEQ16778 126 aa8.57□□□□□ -1.04
TRAPPC3-203ENST00000373163 PDZD11Q5EBL8 140 aa8.57□□□□□ -1.04
TRAPPC3-203ENST00000373163 COA6Q5JTJ3 125 aaKnown RBP8.57□□□□□ -1.04
TRAPPC3-203ENST00000373163 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.57□□□□□ -1.04
TRAPPC3-203ENST00000373163 TMEM136Q6ZRR5 245 aa8.57□□□□□ -1.04
TRAPPC3-203ENST00000373163 HIST1H2BHQ93079 126 aa8.57□□□□□ -1.04
TRAPPC3-203ENST00000373163 HIST1H2BNQ99877 126 aa8.57□□□□□ -1.04
TRAPPC3-203ENST00000373163 HIST1H2BMQ99879 126 aa8.57□□□□□ -1.04
TRAPPC3-203ENST00000373163 A0A1B0GXF2 115 aa8.55□□□□□ -1.04
TRAPPC3-203ENST00000373163 DDTP30046 118 aa8.55□□□□□ -1.04
TRAPPC3-203ENST00000373163 RPL24P83731 157 aaKnown RBP8.55□□□□□ -1.04
TRAPPC3-203ENST00000373163 PAPPA-AS1Q5QFB9 102 aa8.55□□□□□ -1.04
TRAPPC3-203ENST00000373163 NAT8Q9UHE5 227 aa8.55□□□□□ -1.04
TRAPPC3-203ENST00000373163 PRSS47A8MTI9 375 aa8.54□□□□□ -1.04
TRAPPC3-203ENST00000373163 PFN2P35080 140 aa8.54□□□□□ -1.04
TRAPPC3-203ENST00000373163 JOSD1Q15040 202 aaPredicted RBP8.54□□□□□ -1.04
TRAPPC3-203ENST00000373163 ANAPC16Q96DE5 110 aa8.54□□□□□ -1.04
TRAPPC3-203ENST00000373163 MAP1LC3AQ9H492 121 aa8.54□□□□□ -1.04
TRAPPC3-203ENST00000373163 ATP5LO75964 103 aa8.53□□□□□ -1.04
TRAPPC3-203ENST00000373163 TRGC2P03986 189 aa8.53□□□□□ -1.04
TRAPPC3-203ENST00000373163 RPL23P62829 140 aaKnown RBP8.53□□□□□ -1.04
TRAPPC3-203ENST00000373163 ORMDL2Q53FV1 153 aa8.53□□□□□ -1.04
TRAPPC3-203ENST00000373163 SND1-IT1Q9HBX3 110 aa8.53□□□□□ -1.04
TRAPPC3-203ENST00000373163 MOBPQ13875 183 aa8.52□□□□□ -1.05
TRAPPC3-203ENST00000373163 ADIRFQ15847 76 aa8.52□□□□□ -1.05
TRAPPC3-203ENST00000373163 Q8N8P6 123 aa8.52□□□□□ -1.05
TRAPPC3-203ENST00000373163 C14orf144Q96I85 54 aa8.52□□□□□ -1.05
TRAPPC3-203ENST00000373163 Q8NDZ9 215 aa8.51□□□□□ -1.05
TRAPPC3-203ENST00000373163 HIST1H2BLQ99880 126 aa8.51□□□□□ -1.05
TRAPPC3-203ENST00000373163 LAMTOR2Q9Y2Q5 125 aa8.51□□□□□ -1.05
TRAPPC3-203ENST00000373163 SPINK8P0C7L1 97 aa8.5□□□□□ -1.05
TRAPPC3-203ENST00000373163 FABP4P15090 132 aa8.5□□□□□ -1.05
TRAPPC3-203ENST00000373163 LINC00483Q53H64 154 aa8.5□□□□□ -1.05
TRAPPC3-203ENST00000373163 COX6B2Q6YFQ2 88 aa8.5□□□□□ -1.05
TRAPPC3-203ENST00000373163 IGLV5-45A0A087WSX0 123 aa8.49□□□□□ -1.05
TRAPPC3-203ENST00000373163 IGLV9-49A0A0B4J1Y8 123 aa8.49□□□□□ -1.05
TRAPPC3-203ENST00000373163 TINCRA0A1B0GVN0 87 aa8.49□□□□□ -1.05
TRAPPC3-203ENST00000373163 TIMM17AQ99595 171 aa8.49□□□□□ -1.05
TRAPPC3-203ENST00000373163 TRAV9-1A0A075B6T8 112 aa8.48□□□□□ -1.05
TRAPPC3-203ENST00000373163 SSBP3-AS1Q7Z2R9 100 aa8.48□□□□□ -1.05
TRAPPC3-203ENST00000373163 SMCR5Q8TEV8 140 aa8.48□□□□□ -1.05
TRAPPC3-203ENST00000373163 K7EMI3 77 aa8.47□□□□□ -1.05
TRAPPC3-203ENST00000373163 GAGE2AQ6NT46 116 aa8.46□□□□□ -1.06
TRAPPC3-203ENST00000373163 ERG28Q9UKR5 140 aa8.46□□□□□ -1.06
TRAPPC3-203ENST00000373163 ATP5L2Q7Z4Y8 100 aa8.45□□□□□ -1.06
TRAPPC3-203ENST00000373163 SSPOA2VEC9 5147 aa8.45□□□□□ -1.06
TRAPPC3-203ENST00000373163 USH2AO75445 5202 aa8.45□□□□□ -1.06
TRAPPC3-203ENST00000373163 C9orf92A6NGG3 77 aa8.44□□□□□ -1.06
TRAPPC3-203ENST00000373163 G0S2P27469 103 aa8.44□□□□□ -1.06
TRAPPC3-203ENST00000373163 TOMM6Q96B49 74 aa8.44□□□□□ -1.06
TRAPPC3-203ENST00000373163 FLGP20930 4061 aaPredicted RBP8.43□□□□□ -1.06
TRAPPC3-203ENST00000373163 COX17Q14061 63 aa8.43□□□□□ -1.06
TRAPPC3-203ENST00000373163 A0A1B0GV90 55 aa8.42□□□□□ -1.06
TRAPPC3-203ENST00000373163 M0R143 59 aa8.42□□□□□ -1.06
TRAPPC3-203ENST00000373163 PRYO14603 147 aa8.42□□□□□ -1.06
TRAPPC3-203ENST00000373163 COX19Q49B96 90 aa8.42□□□□□ -1.06
TRAPPC3-203ENST00000373163 ERASQ7Z444 233 aa8.42□□□□□ -1.06
TRAPPC3-203ENST00000373163 MRPL18Q9H0U6 180 aaKnown RBP8.42□□□□□ -1.06
TRAPPC3-203ENST00000373163 NXT2Q9NPJ8 142 aaKnown RBP8.42□□□□□ -1.06
TRAPPC3-203ENST00000373163 H3BRM9 83 aa8.41□□□□□ -1.06
TRAPPC3-203ENST00000373163 SCGB3A1Q96QR1 104 aa8.41□□□□□ -1.06
TRAPPC3-203ENST00000373163 SPRR1AP35321 89 aa8.4□□□□□ -1.06
TRAPPC3-203ENST00000373163 ZNF625Q96I27 306 aaPredicted RBP8.4□□□□□ -1.06
TRAPPC3-203ENST00000373163 PRO1933Q9H354 126 aa8.4□□□□□ -1.06
TRAPPC3-203ENST00000373163 CST9LQ9H4G1 147 aa8.4□□□□□ -1.06
TRAPPC3-203ENST00000373163 ETDCA0A1B0GVM5 59 aa8.39□□□□□ -1.07
TRAPPC3-203ENST00000373163 KRTAP4-16G5E9R7 235 aaPredicted RBP8.39□□□□□ -1.07
TRAPPC3-203ENST00000373163 TRAPPC1Q9Y5R8 145 aa8.38□□□□□ -1.07
TRAPPC3-203ENST00000373163 IGLV5-39A0A0G2JS06 123 aa8.37□□□□□ -1.07
TRAPPC3-203ENST00000373163 KCNQ1DNQ9H478 68 aa8.37□□□□□ -1.07
TRAPPC3-203ENST00000373163 FCGBPQ9Y6R7 5405 aaPredicted RBP8.37□□□□□ -1.07
TRAPPC3-203ENST00000373163 CFC1P0CG37 223 aa8.36□□□□□ -1.07
TRAPPC3-203ENST00000373163 C9orf153Q5TBE3 101 aa8.36□□□□□ -1.07
TRAPPC3-203ENST00000373163 ERC2-IT1O76042 136 aa8.35□□□□□ -1.07
TRAPPC3-203ENST00000373163 SCGB1D1O95968 90 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms