RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 C2orf48Q96LS8 159 aa10.82□□□□□ -0.68
COL5A1-201ENST00000371817 COL4A4P53420 1690 aaPredicted RBP10.82□□□□□ -0.68
COL5A1-201ENST00000371817 EDN2P20800 178 aa10.82□□□□□ -0.68
COL5A1-201ENST00000371817 MTORP42345 2549 aa10.81□□□□□ -0.68
COL5A1-201ENST00000371817 M0R2N4 97 aa10.81□□□□□ -0.68
COL5A1-201ENST00000371817 PRRC2CQ9Y520 2896 aaKnown RBP10.81□□□□□ -0.68
COL5A1-201ENST00000371817 C10orf99Q6UWK7 81 aa10.8□□□□□ -0.68
COL5A1-201ENST00000371817 LINC01556Q5JQF7 62 aa10.8□□□□□ -0.68
COL5A1-201ENST00000371817 C11orf72Q8NBR9 251 aa10.8□□□□□ -0.68
COL5A1-201ENST00000371817 CRIPTQ9P021 101 aa10.79□□□□□ -0.68
COL5A1-201ENST00000371817 LINC01006Q8NI28 216 aa10.79□□□□□ -0.68
COL5A1-201ENST00000371817 LINC01600Q96MT4 127 aa10.79□□□□□ -0.68
COL5A1-201ENST00000371817 IGLV1-40P01703 118 aa10.78□□□□□ -0.68
COL5A1-201ENST00000371817 USP9YO00507 2555 aaPredicted RBP10.78□□□□□ -0.68
COL5A1-201ENST00000371817 Q8N2B8 174 aa10.78□□□□□ -0.68
COL5A1-201ENST00000371817 NCOR2Q9Y618 2525 aa10.77□□□□□ -0.69
COL5A1-201ENST00000371817 COA5Q86WW8 74 aa10.76□□□□□ -0.69
COL5A1-201ENST00000371817 IGLV5-39A0A0G2JS06 123 aa10.76□□□□□ -0.69
COL5A1-201ENST00000371817 LOC101927531A0A1B0GV80 90 aa10.76□□□□□ -0.69
COL5A1-201ENST00000371817 FAM218AQ96MZ4 157 aa10.76□□□□□ -0.69
COL5A1-201ENST00000371817 USP24Q9UPU5 2620 aa10.74□□□□□ -0.69
COL5A1-201ENST00000371817 CHD8Q9HCK8 2581 aa10.73□□□□□ -0.69
COL5A1-201ENST00000371817 PRR15Q8IV56 129 aa10.73□□□□□ -0.69
COL5A1-201ENST00000371817 C18orf65Q6ZTR6 163 aa10.73□□□□□ -0.69
COL5A1-201ENST00000371817 IGF2RP11717 2491 aa10.72□□□□□ -0.69
COL5A1-201ENST00000371817 MIR22HGQ0VDD5 57 aa10.72□□□□□ -0.69
COL5A1-201ENST00000371817 KLKP1Q107X0 134 aa10.72□□□□□ -0.69
COL5A1-201ENST00000371817 NHLRC4P0CG21 123 aaPredicted RBP10.72□□□□□ -0.69
COL5A1-201ENST00000371817 SMCR5Q8TEV8 140 aa10.71□□□□□ -0.7
COL5A1-201ENST00000371817 Q6ZSN1 163 aa10.7□□□□□ -0.7
COL5A1-201ENST00000371817 Q8NBF4 154 aa10.7□□□□□ -0.7
COL5A1-201ENST00000371817 IGLV5-52A0A0A0MRZ9 124 aa10.7□□□□□ -0.7
COL5A1-201ENST00000371817 ELOF1P60002 83 aaKnown RBP10.68□□□□□ -0.7
COL5A1-201ENST00000371817 CENPFP49454 3210 aa10.68□□□□□ -0.7
COL5A1-201ENST00000371817 Q6ZRU5 148 aa10.68□□□□□ -0.7
COL5A1-201ENST00000371817 LINC00313P59037 77 aa10.67□□□□□ -0.7
COL5A1-201ENST00000371817 C22orf24Q9Y442 160 aa10.67□□□□□ -0.7
COL5A1-201ENST00000371817 Q8NA96 180 aa10.66□□□□□ -0.7
COL5A1-201ENST00000371817 ODF3L2Q3SX64 289 aa10.65□□□□□ -0.7
COL5A1-201ENST00000371817 NUPR2A6NF83 97 aa10.65□□□□□ -0.7
COL5A1-201ENST00000371817 MOBPQ13875 183 aa10.65□□□□□ -0.7
COL5A1-201ENST00000371817 ANKRD11Q6UB99 2663 aaPredicted RBP10.65□□□□□ -0.71
COL5A1-201ENST00000371817 LY6G6CO95867 125 aa10.65□□□□□ -0.71
COL5A1-201ENST00000371817 C11orf71Q6IPW1 123 aa10.64□□□□□ -0.71
COL5A1-201ENST00000371817 TRBV7-4A0A0J9YYF1 115 aa10.64□□□□□ -0.71
COL5A1-201ENST00000371817 LINC00476Q8WZB0 136 aa10.64□□□□□ -0.71
COL5A1-201ENST00000371817 IGHV3OR16-9A0A0B4J2B5 98 aa10.64□□□□□ -0.71
COL5A1-201ENST00000371817 MUC22E2RYF6 1773 aaPredicted RBP10.64□□□□□ -0.71
COL5A1-201ENST00000371817 WISP2O76076 250 aa10.63□□□□□ -0.71
COL5A1-201ENST00000371817 IGLV5-45A0A087WSX0 123 aa10.62□□□□□ -0.71
COL5A1-201ENST00000371817 WIPF1O43516 503 aa10.62□□□□□ -0.71
COL5A1-201ENST00000371817 LUZP6Q538Z0 58 aa10.61□□□□□ -0.71
COL5A1-201ENST00000371817 H7BZZ5 65 aa10.61□□□□□ -0.71
COL5A1-201ENST00000371817 C19orf84I3L1E1 186 aa10.6□□□□□ -0.71
COL5A1-201ENST00000371817 LYPD5Q6UWN5 251 aa10.59□□□□□ -0.71
COL5A1-201ENST00000371817 A8MWP4 228 aa10.58□□□□□ -0.72
COL5A1-201ENST00000371817 SPACA4Q8TDM5 124 aa10.58□□□□□ -0.72
COL5A1-201ENST00000371817 FHL3Q13643 280 aa10.58□□□□□ -0.72
COL5A1-201ENST00000371817 Q6ZRX8 168 aa10.58□□□□□ -0.72
COL5A1-201ENST00000371817 A0A1W2PNU3 283 aaPredicted RBP10.58□□□□□ -0.72
COL5A1-201ENST00000371817 KIF25-AS1Q9Y6Z4 181 aa10.58□□□□□ -0.72
COL5A1-201ENST00000371817 INAFM1C9JVW0 142 aa10.57□□□□□ -0.72
COL5A1-201ENST00000371817 H3BS24 57 aa10.57□□□□□ -0.72
COL5A1-201ENST00000371817 RPL37AP61513 92 aaKnown RBP10.57□□□□□ -0.72
COL5A1-201ENST00000371817 K7EQZ3 153 aa10.56□□□□□ -0.72
COL5A1-201ENST00000371817 LINC00167Q96N53 147 aa10.55□□□□□ -0.72
COL5A1-201ENST00000371817 IGLV1-51P01701 117 aa10.55□□□□□ -0.72
COL5A1-201ENST00000371817 LINC01554Q52M75 96 aa10.55□□□□□ -0.72
COL5A1-201ENST00000371817 APLNQ9ULZ1 77 aa10.54□□□□□ -0.72
COL5A1-201ENST00000371817 CDC42SE1Q9NRR8 79 aa10.53□□□□□ -0.72
COL5A1-201ENST00000371817 FAM229AH3BQW9 127 aa10.53□□□□□ -0.72
COL5A1-201ENST00000371817 BRI3O95415 125 aa10.52□□□□□ -0.72
COL5A1-201ENST00000371817 EPM2AB3EWF7 344 aa10.51□□□□□ -0.73
COL5A1-201ENST00000371817 FASNP49327 2511 aaKnown RBP10.51□□□□□ -0.73
COL5A1-201ENST00000371817 C9orf129Q5T035 196 aaKnown RBP10.48□□□□□ -0.73
COL5A1-201ENST00000371817 MRPL34Q9BQ48 92 aaKnown RBP10.47□□□□□ -0.73
COL5A1-201ENST00000371817 RBM12B-AS1Q9P1G2 102 aa10.45□□□□□ -0.74
COL5A1-201ENST00000371817 IGLV6-57P01721 117 aa10.45□□□□□ -0.74
COL5A1-201ENST00000371817 Q1T7F1 81 aa10.44□□□□□ -0.74
COL5A1-201ENST00000371817 LINC00315P59091 139 aa10.44□□□□□ -0.74
COL5A1-201ENST00000371817 SPANXA2-OT1Q8N9U9 137 aa10.44□□□□□ -0.74
COL5A1-201ENST00000371817 Q96NJ1 140 aa10.42□□□□□ -0.74
COL5A1-201ENST00000371817 EPG5Q9HCE0 2579 aa10.41□□□□□ -0.74
COL5A1-201ENST00000371817 LY6G6DO95868 133 aa10.41□□□□□ -0.74
COL5A1-201ENST00000371817 ST20-AS1Q8NBB2 130 aa10.4□□□□□ -0.74
COL5A1-201ENST00000371817 LITAFQ99732 161 aa10.4□□□□□ -0.74
COL5A1-201ENST00000371817 C1orf134Q5TEV5 83 aa10.4□□□□□ -0.75
COL5A1-201ENST00000371817 AKAP13Q12802 2813 aa10.39□□□□□ -0.75
COL5A1-201ENST00000371817 PRO3102Q9H379 93 aa10.37□□□□□ -0.75
COL5A1-201ENST00000371817 C16orf90A8MZG2 172 aa10.35□□□□□ -0.75
COL5A1-201ENST00000371817 TYMSOSQ8TAI1 123 aa10.33□□□□□ -0.76
COL5A1-201ENST00000371817 GVQW2A0A096LPI5 108 aaPredicted RBP10.33□□□□□ -0.76
COL5A1-201ENST00000371817 PHF5AQ7RTV0 110 aaKnown RBP10.32□□□□□ -0.76
COL5A1-201ENST00000371817 CDSNQ15517 529 aa10.32□□□□□ -0.76
COL5A1-201ENST00000371817 AVPP01185 164 aa10.32□□□□□ -0.76
COL5A1-201ENST00000371817 CHTF8P0CG12 524 aa10.32□□□□□ -0.76
COL5A1-201ENST00000371817 Q6ZRP5 223 aa10.31□□□□□ -0.76
COL5A1-201ENST00000371817 C8orf17Q9NRJ1 99 aa10.28□□□□□ -0.76
COL5A1-201ENST00000371817 A0A1B0GVX0 72 aa10.27□□□□□ -0.77
COL5A1-201ENST00000371817 A0A0A0MQY5 61 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms