RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 LINC00337Q8N6G1 96 aa6.41□□□□□ -1.38
SMARCA1-202ENST00000371122 LELP1Q5T871 98 aa6.41□□□□□ -1.38
SMARCA1-202ENST00000371122 EIF4EBP3O60516 100 aaPredicted RBP6.4□□□□□ -1.39
SMARCA1-202ENST00000371122 SMCPP49901 116 aaPredicted RBP6.4□□□□□ -1.39
SMARCA1-202ENST00000371122 SPINK6Q6UWN8 80 aa6.4□□□□□ -1.39
SMARCA1-202ENST00000371122 NF1P21359 2839 aa6.39□□□□□ -1.39
SMARCA1-202ENST00000371122 WFDC13Q8IUB5 93 aa6.39□□□□□ -1.39
SMARCA1-202ENST00000371122 BEAN1Q3B7T3 259 aa6.39□□□□□ -1.39
SMARCA1-202ENST00000371122 MPLKIPQ8TAP9 179 aa6.39□□□□□ -1.39
SMARCA1-202ENST00000371122 USP17L23D6RBM5 183 aa6.38□□□□□ -1.39
SMARCA1-202ENST00000371122 DEFB116Q30KQ4 102 aa6.38□□□□□ -1.39
SMARCA1-202ENST00000371122 KLK5Q9Y337 293 aaPredicted RBP6.38□□□□□ -1.39
SMARCA1-202ENST00000371122 HIVEP1P15822 2718 aa6.38□□□□□ -1.39
SMARCA1-202ENST00000371122 ZNF73O43830 326 aaPredicted RBP6.38□□□□□ -1.39
SMARCA1-202ENST00000371122 TIMM17BO60830 172 aa6.38□□□□□ -1.39
SMARCA1-202ENST00000371122 SOSTDC1Q6X4U4 206 aa6.38□□□□□ -1.39
SMARCA1-202ENST00000371122 SHISA2Q6UWI4 295 aa6.38□□□□□ -1.39
SMARCA1-202ENST00000371122 Q8IZM0 81 aa6.37□□□□□ -1.39
SMARCA1-202ENST00000371122 FAM19A4Q96LR4 140 aa6.36□□□□□ -1.39
SMARCA1-202ENST00000371122 C10orf25Q5T742 122 aa6.35□□□□□ -1.39
SMARCA1-202ENST00000371122 KIR2DL5BQ8NHK3 375 aa6.35□□□□□ -1.39
SMARCA1-202ENST00000371122 FBN2P35556 2912 aa6.35□□□□□ -1.39
SMARCA1-202ENST00000371122 Q8N9L7 120 aa6.35□□□□□ -1.39
SMARCA1-202ENST00000371122 TRAV10A0A0B4J240 114 aa6.35□□□□□ -1.39
SMARCA1-202ENST00000371122 IGHV3OR16-9A0A0B4J2B5 98 aa6.35□□□□□ -1.39
SMARCA1-202ENST00000371122 FAM218AQ96MZ4 157 aa6.34□□□□□ -1.39
SMARCA1-202ENST00000371122 IGLV9-49A0A0B4J1Y8 123 aa6.34□□□□□ -1.39
SMARCA1-202ENST00000371122 CDIP1Q9H305 208 aa6.34□□□□□ -1.39
SMARCA1-202ENST00000371122 LYPD5Q6UWN5 251 aa6.33□□□□□ -1.4
SMARCA1-202ENST00000371122 Q6ZRU5 148 aa6.33□□□□□ -1.4
SMARCA1-202ENST00000371122 LINC00846Q9NV44 126 aa6.33□□□□□ -1.4
SMARCA1-202ENST00000371122 STAB2Q8WWQ8 2551 aa6.33□□□□□ -1.4
SMARCA1-202ENST00000371122 NDUFB1O75438 58 aa6.33□□□□□ -1.4
SMARCA1-202ENST00000371122 Q8N814 137 aa6.33□□□□□ -1.4
SMARCA1-202ENST00000371122 UQCRQO14949 82 aa6.33□□□□□ -1.4
SMARCA1-202ENST00000371122 LY6G6CO95867 125 aa6.33□□□□□ -1.4
SMARCA1-202ENST00000371122 HRNRQ86YZ3 2850 aaPredicted RBP6.33□□□□□ -1.4
SMARCA1-202ENST00000371122 RPL28P46779 137 aaKnown RBP6.32□□□□□ -1.4
SMARCA1-202ENST00000371122 FHL3Q13643 280 aa6.32□□□□□ -1.4
SMARCA1-202ENST00000371122 M0R378 163 aa6.32□□□□□ -1.4
SMARCA1-202ENST00000371122 IGKV4-1P06312 121 aa6.32□□□□□ -1.4
SMARCA1-202ENST00000371122 MP68P56378 58 aa6.32□□□□□ -1.4
SMARCA1-202ENST00000371122 C3orf22Q8N5N4 141 aa6.32□□□□□ -1.4
SMARCA1-202ENST00000371122 FAM30AQ9NZY2 134 aa6.31□□□□□ -1.4
SMARCA1-202ENST00000371122 CSDC2Q9Y534 153 aaKnown RBP6.31□□□□□ -1.4
SMARCA1-202ENST00000371122 J3KT08 172 aa6.3□□□□□ -1.4
SMARCA1-202ENST00000371122 PRO0461Q9UI25 63 aa6.3□□□□□ -1.4
SMARCA1-202ENST00000371122 PRLHP81277 87 aa6.3□□□□□ -1.4
SMARCA1-202ENST00000371122 A0A0U1RQV1 116 aa6.29□□□□□ -1.4
SMARCA1-202ENST00000371122 ESRGQ1W209 222 aa6.29□□□□□ -1.4
SMARCA1-202ENST00000371122 Q6Q795 121 aa6.29□□□□□ -1.4
SMARCA1-202ENST00000371122 BRK1Q8WUW1 75 aa6.29□□□□□ -1.4
SMARCA1-202ENST00000371122 B9D2Q9BPU9 175 aa6.29□□□□□ -1.4
SMARCA1-202ENST00000371122 X6R8D5 127 aa6.29□□□□□ -1.4
SMARCA1-202ENST00000371122 IGLV5-39A0A0G2JS06 123 aa6.28□□□□□ -1.4
SMARCA1-202ENST00000371122 PDE6GP18545 87 aa6.28□□□□□ -1.4
SMARCA1-202ENST00000371122 M0QXV9 152 aa6.28□□□□□ -1.4
SMARCA1-202ENST00000371122 TMEM258P61165 79 aa6.28□□□□□ -1.4
SMARCA1-202ENST00000371122 C16orf95Q9H693 158 aa6.28□□□□□ -1.4
SMARCA1-202ENST00000371122 PDZD2O15018 2839 aa6.27□□□□□ -1.41
SMARCA1-202ENST00000371122 SERP2Q8N6R1 65 aa6.27□□□□□ -1.41
SMARCA1-202ENST00000371122 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.26□□□□□ -1.41
SMARCA1-202ENST00000371122 A0A1B0GUV1 79 aa6.26□□□□□ -1.41
SMARCA1-202ENST00000371122 LINC01546A6NGU7 62 aa6.26□□□□□ -1.41
SMARCA1-202ENST00000371122 EGFEM1PQ0D2K5 195 aa6.26□□□□□ -1.41
SMARCA1-202ENST00000371122 LINC00575Q6W349 94 aa6.26□□□□□ -1.41
SMARCA1-202ENST00000371122 COX7CP15954 63 aa6.26□□□□□ -1.41
SMARCA1-202ENST00000371122 NIPBLQ6KC79 2804 aaeCLIP6.25□□□□□ -1.41
SMARCA1-202ENST00000371122 LOC107984640A0A0U1RRK4 108 aa6.25□□□□□ -1.41
SMARCA1-202ENST00000371122 FAM236DA0A1B0GTK5 79 aa6.25□□□□□ -1.41
SMARCA1-202ENST00000371122 PLAC8L1A1L4L8 177 aa6.25□□□□□ -1.41
SMARCA1-202ENST00000371122 FAM236CP0DP71 79 aa6.25□□□□□ -1.41
SMARCA1-202ENST00000371122 COX17Q14061 63 aa6.25□□□□□ -1.41
SMARCA1-202ENST00000371122 C1orf137Q5JT78 98 aa6.25□□□□□ -1.41
SMARCA1-202ENST00000371122 SPATA3Q8NHX4 192 aa6.25□□□□□ -1.41
SMARCA1-202ENST00000371122 NDUFC2-KCTD14E9PQ53 114 aa6.25□□□□□ -1.41
SMARCA1-202ENST00000371122 KRTAP24-1Q3LI83 254 aa6.25□□□□□ -1.41
SMARCA1-202ENST00000371122 C4orf48Q5BLP8 95 aa6.25□□□□□ -1.41
SMARCA1-202ENST00000371122 SBSPONQ8IVN8 264 aa6.25□□□□□ -1.41
SMARCA1-202ENST00000371122 ZNF575Q86XF7 245 aa6.24□□□□□ -1.41
SMARCA1-202ENST00000371122 C6orf48Q9UBA6 75 aa6.24□□□□□ -1.41
SMARCA1-202ENST00000371122 A0A087WSZ3 146 aa6.24□□□□□ -1.41
SMARCA1-202ENST00000371122 SPTSSBQ8NFR3 76 aa6.24□□□□□ -1.41
SMARCA1-202ENST00000371122 CSMD3Q7Z407 3707 aa6.23□□□□□ -1.41
SMARCA1-202ENST00000371122 PKIGQ9Y2B9 76 aa6.23□□□□□ -1.41
SMARCA1-202ENST00000371122 FAM19A3Q7Z5A8 133 aa6.23□□□□□ -1.41
SMARCA1-202ENST00000371122 RETNLBQ9BQ08 111 aa6.23□□□□□ -1.41
SMARCA1-202ENST00000371122 CHKB-CPT1BH3BT56 60 aa6.23□□□□□ -1.41
SMARCA1-202ENST00000371122 LITAFQ99732 161 aa6.23□□□□□ -1.41
SMARCA1-202ENST00000371122 FSHBP01225 129 aa6.22□□□□□ -1.41
SMARCA1-202ENST00000371122 GIG44P09565 113 aaPredicted RBP6.22□□□□□ -1.41
SMARCA1-202ENST00000371122 KRTAP1-3Q8IUG1 177 aa6.22□□□□□ -1.41
SMARCA1-202ENST00000371122 C14orf177Q52M58 125 aa6.21□□□□□ -1.41
SMARCA1-202ENST00000371122 Q6ZVQ6 151 aa6.21□□□□□ -1.41
SMARCA1-202ENST00000371122 A0A096LNT2 108 aa6.21□□□□□ -1.42
SMARCA1-202ENST00000371122 LINC01547P58512 204 aaPredicted RBP6.21□□□□□ -1.42
SMARCA1-202ENST00000371122 ZNF469Q96JG9 3925 aaPredicted RBP6.21□□□□□ -1.42
SMARCA1-202ENST00000371122 Q6JHZ5 121 aa6.2□□□□□ -1.42
SMARCA1-202ENST00000371122 MUC7Q8TAX7 377 aa6.2□□□□□ -1.42
SMARCA1-202ENST00000371122 IMUPQ9GZP8 106 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms