RNA–Protein interactions for RNA: ENST00000370397.7

CHUK-201, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHUK, Length 3,625 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-201ENST00000370397 SETD2Q9BYW2 2564 aaPredicted RBP11.86□□□□□ -0.51
CHUK-201ENST00000370397 FLNAP21333 2647 aaKnown RBP11.86□□□□□ -0.51
CHUK-201ENST00000370397 BCE1O60756 84 aa11.86□□□□□ -0.51
CHUK-201ENST00000370397 LINC01547P58512 204 aaPredicted RBP11.86□□□□□ -0.51
CHUK-201ENST00000370397 UBL5Q9BZL1 73 aa11.85□□□□□ -0.51
CHUK-201ENST00000370397 A0A096LPF7 62 aa11.84□□□□□ -0.51
CHUK-201ENST00000370397 PRO0255Q9UI72 69 aa11.84□□□□□ -0.51
CHUK-201ENST00000370397 RBM3P98179 157 aaKnown RBP11.83□□□□□ -0.52
CHUK-201ENST00000370397 Q6ZVQ6 151 aa11.83□□□□□ -0.52
CHUK-201ENST00000370397 C20orf197Q8N268 126 aa11.83□□□□□ -0.52
CHUK-201ENST00000370397 FN1P02751 2386 aaKnown RBP11.83□□□□□ -0.52
CHUK-201ENST00000370397 KLKP1Q107X0 134 aa11.82□□□□□ -0.52
CHUK-201ENST00000370397 TRAV10A0A0B4J240 114 aa11.82□□□□□ -0.52
CHUK-201ENST00000370397 A0A0J9YWU9 116 aa11.82□□□□□ -0.52
CHUK-201ENST00000370397 IGHV4-30-4P0DP06 118 aa11.82□□□□□ -0.52
CHUK-201ENST00000370397 KRTAP1-1Q07627 177 aa11.82□□□□□ -0.52
CHUK-201ENST00000370397 IGLV10-54A0A075B6I4 117 aa11.81□□□□□ -0.52
CHUK-201ENST00000370397 REG3AQ06141 175 aa11.81□□□□□ -0.52
CHUK-201ENST00000370397 UNC79Q9P2D8 2635 aa11.8□□□□□ -0.52
CHUK-201ENST00000370397 TRAV7A0A075B6U4 112 aa11.8□□□□□ -0.52
CHUK-201ENST00000370397 UNQ6190/PRO20217Q6UXQ8 127 aa11.8□□□□□ -0.52
CHUK-201ENST00000370397 TRBV7-4A0A0J9YYF1 115 aa11.78□□□□□ -0.52
CHUK-201ENST00000370397 CXCL6P80162 114 aa11.78□□□□□ -0.52
CHUK-201ENST00000370397 RNASE1P07998 156 aaKnown RBP11.78□□□□□ -0.52
CHUK-201ENST00000370397 WFDC11Q8NEX6 87 aa11.78□□□□□ -0.52
CHUK-201ENST00000370397 MUC7Q8TAX7 377 aa11.77□□□□□ -0.52
CHUK-201ENST00000370397 HRCT1Q6UXD1 115 aa11.76□□□□□ -0.53
CHUK-201ENST00000370397 Q6ZQY7 126 aa11.76□□□□□ -0.53
CHUK-201ENST00000370397 FAM236DA0A1B0GTK5 79 aa11.76□□□□□ -0.53
CHUK-201ENST00000370397 FAM236CP0DP71 79 aa11.76□□□□□ -0.53
CHUK-201ENST00000370397 KRTAP10-3P60369 221 aa11.75□□□□□ -0.53
CHUK-201ENST00000370397 ANGP03950 147 aaKnown RBP11.75□□□□□ -0.53
CHUK-201ENST00000370397 GVQW2A0A096LPI5 108 aaPredicted RBP11.74□□□□□ -0.53
CHUK-201ENST00000370397 CYSRT1A8MQ03 144 aa11.74□□□□□ -0.53
CHUK-201ENST00000370397 PRR34Q9NV39 138 aa11.74□□□□□ -0.53
CHUK-201ENST00000370397 ITPR2Q14571 2701 aa11.72□□□□□ -0.53
CHUK-201ENST00000370397 FASNP49327 2511 aaKnown RBP11.72□□□□□ -0.53
CHUK-201ENST00000370397 SPAG11BQ08648 103 aa11.72□□□□□ -0.53
CHUK-201ENST00000370397 LAMTOR3Q9UHA4 124 aa11.72□□□□□ -0.53
CHUK-201ENST00000370397 TRBV7-6A0A0J9YX20 115 aa11.71□□□□□ -0.53
CHUK-201ENST00000370397 SERP1Q9Y6X1 66 aa11.71□□□□□ -0.53
CHUK-201ENST00000370397 ANK2Q01484 3957 aa11.71□□□□□ -0.53
CHUK-201ENST00000370397 LYRM9A8MSI8 78 aa11.71□□□□□ -0.54
CHUK-201ENST00000370397 C6orf48Q9UBA6 75 aa11.71□□□□□ -0.54
CHUK-201ENST00000370397 CCDC168Q8NDH2 2452 aa11.7□□□□□ -0.54
CHUK-201ENST00000370397 RMI2Q96E14 147 aa11.7□□□□□ -0.54
CHUK-201ENST00000370397 PDE6GP18545 87 aa11.69□□□□□ -0.54
CHUK-201ENST00000370397 TRRAPQ9Y4A5 3859 aa11.69□□□□□ -0.54
CHUK-201ENST00000370397 ELOF1P60002 83 aaKnown RBP11.69□□□□□ -0.54
CHUK-201ENST00000370397 CELA1Q9UNI1 258 aa11.69□□□□□ -0.54
CHUK-201ENST00000370397 TM2D3Q9BRN9 247 aa11.69□□□□□ -0.54
CHUK-201ENST00000370397 FP248Q71RG6 208 aaPredicted RBP11.68□□□□□ -0.54
CHUK-201ENST00000370397 HAMPP81172 84 aa11.68□□□□□ -0.54
CHUK-201ENST00000370397 HIVEP1P15822 2718 aa11.68□□□□□ -0.54
CHUK-201ENST00000370397 HECTD1Q9ULT8 2610 aa11.68□□□□□ -0.54
CHUK-201ENST00000370397 DNAH1Q9P2D7 4330 aa11.67□□□□□ -0.54
CHUK-201ENST00000370397 SNURFQ9Y675 71 aa11.67□□□□□ -0.54
CHUK-201ENST00000370397 H3BQ85 93 aa11.67□□□□□ -0.54
CHUK-201ENST00000370397 DEFB4AO15263 64 aa11.66□□□□□ -0.54
CHUK-201ENST00000370397 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.66□□□□□ -0.54
CHUK-201ENST00000370397 ZNF73O43830 326 aaPredicted RBP11.65□□□□□ -0.55
CHUK-201ENST00000370397 VPREB1P12018 145 aa11.64□□□□□ -0.55
CHUK-201ENST00000370397 DIRC1Q969H9 104 aa11.64□□□□□ -0.55
CHUK-201ENST00000370397 Q8NAQ8 132 aa11.64□□□□□ -0.55
CHUK-201ENST00000370397 MTORP42345 2549 aa11.63□□□□□ -0.55
CHUK-201ENST00000370397 F8WEM9 126 aa11.63□□□□□ -0.55
CHUK-201ENST00000370397 KRTAP26-1Q6PEX3 210 aa11.63□□□□□ -0.55
CHUK-201ENST00000370397 XAGE1AQ9HD64 81 aa11.63□□□□□ -0.55
CHUK-201ENST00000370397 LELP1Q5T871 98 aa11.62□□□□□ -0.55
CHUK-201ENST00000370397 ACANP16112 2415 aa11.62□□□□□ -0.55
CHUK-201ENST00000370397 TENM1Q9UKZ4 2725 aa11.62□□□□□ -0.55
CHUK-201ENST00000370397 SCXQ7RTU7 201 aa11.62□□□□□ -0.55
CHUK-201ENST00000370397 LINC00528Q8N1L1 170 aa11.61□□□□□ -0.55
CHUK-201ENST00000370397 DEFB135Q30KP9 77 aa11.6□□□□□ -0.55
CHUK-201ENST00000370397 OTOGQ6ZRI0 2925 aa11.6□□□□□ -0.55
CHUK-201ENST00000370397 COX7BP24311 80 aa11.59□□□□□ -0.55
CHUK-201ENST00000370397 IGKV4-1P06312 121 aa11.59□□□□□ -0.55
CHUK-201ENST00000370397 LINC00336Q6ZUF6 198 aa11.59□□□□□ -0.55
CHUK-201ENST00000370397 KLK12Q9UKR0 248 aa11.58□□□□□ -0.56
CHUK-201ENST00000370397 PKD1L1Q8TDX9 2849 aa11.57□□□□□ -0.56
CHUK-201ENST00000370397 ERC2-IT1O76042 136 aa11.57□□□□□ -0.56
CHUK-201ENST00000370397 OCR1Q9BZK8 76 aa11.56□□□□□ -0.56
CHUK-201ENST00000370397 NREPQ16612 68 aa11.55□□□□□ -0.56
CHUK-201ENST00000370397 DAD1P61803 113 aa11.55□□□□□ -0.56
CHUK-201ENST00000370397 NDUFC1O43677 76 aa11.54□□□□□ -0.56
CHUK-201ENST00000370397 BPY2O14599 106 aa11.54□□□□□ -0.56
CHUK-201ENST00000370397 MIFP14174 115 aa11.54□□□□□ -0.56
CHUK-201ENST00000370397 Q8N9L7 120 aa11.54□□□□□ -0.56
CHUK-201ENST00000370397 TMEM254Q8TBM7 123 aa11.53□□□□□ -0.56
CHUK-201ENST00000370397 LINC00474Q9P2X8 69 aa11.53□□□□□ -0.56
CHUK-201ENST00000370397 C15orf56Q8N910 161 aa11.52□□□□□ -0.56
CHUK-201ENST00000370397 SMIM26A0A096LP01 95 aa11.52□□□□□ -0.57
CHUK-201ENST00000370397 CMYA5Q8N3K9 4069 aa11.52□□□□□ -0.57
CHUK-201ENST00000370397 A0A0U1RQV1 116 aa11.52□□□□□ -0.57
CHUK-201ENST00000370397 MRAPQ8TCY5 172 aa11.52□□□□□ -0.57
CHUK-201ENST00000370397 FAM229BQ4G0N7 80 aa11.5□□□□□ -0.57
CHUK-201ENST00000370397 M0R378 163 aa11.5□□□□□ -0.57
CHUK-201ENST00000370397 Q6ZRU5 148 aa11.5□□□□□ -0.57
CHUK-201ENST00000370397 EGFEM1PQ0D2K5 195 aa11.48□□□□□ -0.57
CHUK-201ENST00000370397 SMR3AQ99954 134 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms