RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 LITAFQ99732 161 aa3.65□□□□□ -1.83
SMNDC1-202ENST00000369603 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.64□□□□□ -1.83
SMNDC1-202ENST00000369603 IGKV2-28A0A075B6P5 120 aa3.64□□□□□ -1.83
SMNDC1-202ENST00000369603 IGKV2D-28P01615 120 aa3.64□□□□□ -1.83
SMNDC1-202ENST00000369603 FAM19A1Q7Z5A9 133 aa3.64□□□□□ -1.83
SMNDC1-202ENST00000369603 HIGD2AQ9BW72 106 aa3.64□□□□□ -1.83
SMNDC1-202ENST00000369603 PRR3P79522 188 aaKnown RBP3.64□□□□□ -1.83
SMNDC1-202ENST00000369603 HRCT1Q6UXD1 115 aa3.64□□□□□ -1.83
SMNDC1-202ENST00000369603 SOSTDC1Q6X4U4 206 aa3.64□□□□□ -1.83
SMNDC1-202ENST00000369603 Q6ZRU5 148 aa3.64□□□□□ -1.83
SMNDC1-202ENST00000369603 LINC00846Q9NV44 126 aa3.64□□□□□ -1.83
SMNDC1-202ENST00000369603 BOD1L1Q8NFC6 3051 aa3.64□□□□□ -1.83
SMNDC1-202ENST00000369603 ATRQ13535 2644 aa3.64□□□□□ -1.83
SMNDC1-202ENST00000369603 UNC79Q9P2D8 2635 aa3.64□□□□□ -1.83
SMNDC1-202ENST00000369603 FLNCQ14315 2725 aa3.63□□□□□ -1.83
SMNDC1-202ENST00000369603 WIPF1O43516 503 aa3.63□□□□□ -1.83
SMNDC1-202ENST00000369603 SCXQ7RTU7 201 aa3.63□□□□□ -1.83
SMNDC1-202ENST00000369603 DMXL1Q9Y485 3027 aa3.63□□□□□ -1.83
SMNDC1-202ENST00000369603 GVQW2A0A096LPI5 108 aaPredicted RBP3.63□□□□□ -1.83
SMNDC1-202ENST00000369603 ADGRG4Q8IZF6 3080 aa3.62□□□□□ -1.83
SMNDC1-202ENST00000369603 EIF4EBP3O60516 100 aaPredicted RBP3.62□□□□□ -1.83
SMNDC1-202ENST00000369603 CCKP06307 115 aa3.62□□□□□ -1.83
SMNDC1-202ENST00000369603 LINC00575Q6W349 94 aa3.62□□□□□ -1.83
SMNDC1-202ENST00000369603 FAM218AQ96MZ4 157 aa3.62□□□□□ -1.83
SMNDC1-202ENST00000369603 SNURFQ9Y675 71 aa3.62□□□□□ -1.83
SMNDC1-202ENST00000369603 KRTAP10-11P60412 298 aa3.62□□□□□ -1.83
SMNDC1-202ENST00000369603 BPY2O14599 106 aa3.62□□□□□ -1.83
SMNDC1-202ENST00000369603 NDUFB1O75438 58 aa3.62□□□□□ -1.83
SMNDC1-202ENST00000369603 PRR34Q9NV39 138 aa3.62□□□□□ -1.83
SMNDC1-202ENST00000369603 C6orf48Q9UBA6 75 aa3.62□□□□□ -1.83
SMNDC1-202ENST00000369603 FREM2Q5SZK8 3169 aa3.61□□□□□ -1.83
SMNDC1-202ENST00000369603 RPL37AP8A6NKH3 93 aa3.61□□□□□ -1.83
SMNDC1-202ENST00000369603 PRYO14603 147 aa3.61□□□□□ -1.83
SMNDC1-202ENST00000369603 DNAH10OSP0CZ25 163 aa3.61□□□□□ -1.83
SMNDC1-202ENST00000369603 CRYGAP11844 174 aa3.61□□□□□ -1.83
SMNDC1-202ENST00000369603 SMCR5Q8TEV8 140 aa3.61□□□□□ -1.83
SMNDC1-202ENST00000369603 BRK1Q8WUW1 75 aa3.61□□□□□ -1.83
SMNDC1-202ENST00000369603 ATMQ13315 3056 aa3.61□□□□□ -1.83
SMNDC1-202ENST00000369603 MAP1AP78559 2803 aaPredicted RBP3.61□□□□□ -1.83
SMNDC1-202ENST00000369603 TRBV7-6A0A0J9YX20 115 aa3.61□□□□□ -1.83
SMNDC1-202ENST00000369603 Q8N3U1 123 aa3.61□□□□□ -1.83
SMNDC1-202ENST00000369603 M0R2N4 97 aa3.6□□□□□ -1.83
SMNDC1-202ENST00000369603 C10orf25Q5T742 122 aa3.6□□□□□ -1.83
SMNDC1-202ENST00000369603 REG3GQ6UW15 175 aa3.6□□□□□ -1.83
SMNDC1-202ENST00000369603 MRPL55Q7Z7F7 128 aaKnown RBP3.6□□□□□ -1.83
SMNDC1-202ENST00000369603 CHD6Q8TD26 2715 aa3.6□□□□□ -1.83
SMNDC1-202ENST00000369603 LINC00588Q9Y4M8 146 aa3.6□□□□□ -1.83
SMNDC1-202ENST00000369603 ZNF706Q9Y5V0 76 aaPredicted RBP3.6□□□□□ -1.83
SMNDC1-202ENST00000369603 MPLKIPQ8TAP9 179 aa3.59□□□□□ -1.83
SMNDC1-202ENST00000369603 TEX15Q9BXT5 2789 aa3.59□□□□□ -1.83
SMNDC1-202ENST00000369603 TRAV7A0A075B6U4 112 aa3.59□□□□□ -1.84
SMNDC1-202ENST00000369603 K7EIL1 84 aa3.59□□□□□ -1.84
SMNDC1-202ENST00000369603 LY6G6CO95867 125 aa3.59□□□□□ -1.84
SMNDC1-202ENST00000369603 KIAA0087Q14695 138 aa3.58□□□□□ -1.84
SMNDC1-202ENST00000369603 C7orf33Q8WU49 177 aa3.58□□□□□ -1.84
SMNDC1-202ENST00000369603 A0A0U1RQV1 116 aa3.58□□□□□ -1.84
SMNDC1-202ENST00000369603 RPS28P62857 69 aaKnown RBP3.58□□□□□ -1.84
SMNDC1-202ENST00000369603 TM2D3Q9BRN9 247 aa3.58□□□□□ -1.84
SMNDC1-202ENST00000369603 MAST4O15021 2626 aa3.58□□□□□ -1.84
SMNDC1-202ENST00000369603 SERP1Q9Y6X1 66 aa3.58□□□□□ -1.84
SMNDC1-202ENST00000369603 SMIM26A0A096LP01 95 aa3.57□□□□□ -1.84
SMNDC1-202ENST00000369603 NDUFC1O43677 76 aa3.57□□□□□ -1.84
SMNDC1-202ENST00000369603 MP68P56378 58 aa3.57□□□□□ -1.84
SMNDC1-202ENST00000369603 FAM104AQ969W3 186 aa3.57□□□□□ -1.84
SMNDC1-202ENST00000369603 MDFIQ99750 246 aa3.57□□□□□ -1.84
SMNDC1-202ENST00000369603 C22orf24Q9Y442 160 aa3.57□□□□□ -1.84
SMNDC1-202ENST00000369603 C4orf26Q17RF5 130 aa3.57□□□□□ -1.84
SMNDC1-202ENST00000369603 COL12A1Q99715 3063 aa3.57□□□□□ -1.84
SMNDC1-202ENST00000369603 C3orf84H3BNL1 204 aa3.56□□□□□ -1.84
SMNDC1-202ENST00000369603 ELOF1P60002 83 aaKnown RBP3.56□□□□□ -1.84
SMNDC1-202ENST00000369603 SPATA3Q8NHX4 192 aa3.56□□□□□ -1.84
SMNDC1-202ENST00000369603 V9GYY9 64 aa3.56□□□□□ -1.84
SMNDC1-202ENST00000369603 IGLV6-57P01721 117 aa3.56□□□□□ -1.84
SMNDC1-202ENST00000369603 C1orf137Q5JT78 98 aa3.56□□□□□ -1.84
SMNDC1-202ENST00000369603 C1orf134Q5TEV5 83 aa3.56□□□□□ -1.84
SMNDC1-202ENST00000369603 LOC400499M0QZD8 3231 aa3.56□□□□□ -1.84
SMNDC1-202ENST00000369603 C4orf48Q5BLP8 95 aa3.56□□□□□ -1.84
SMNDC1-202ENST00000369603 LRBAP50851 2863 aa3.56□□□□□ -1.84
SMNDC1-202ENST00000369603 ATP5EP56381 51 aaPredicted RBP3.56□□□□□ -1.84
SMNDC1-202ENST00000369603 MYO15AQ9UKN7 3530 aa3.55□□□□□ -1.84
SMNDC1-202ENST00000369603 VPREB1P12018 145 aa3.55□□□□□ -1.84
SMNDC1-202ENST00000369603 LINC01600Q96MT4 127 aa3.55□□□□□ -1.84
SMNDC1-202ENST00000369603 LINC00167Q96N53 147 aa3.55□□□□□ -1.84
SMNDC1-202ENST00000369603 USP34Q70CQ2 3546 aa3.55□□□□□ -1.84
SMNDC1-202ENST00000369603 NBDYA0A0U1RRE5 68 aa3.55□□□□□ -1.84
SMNDC1-202ENST00000369603 Q6ZVQ6 151 aa3.55□□□□□ -1.84
SMNDC1-202ENST00000369603 MGAM2Q2M2H8 2515 aa3.55□□□□□ -1.84
SMNDC1-202ENST00000369603 A0A096LNI7 61 aa3.55□□□□□ -1.84
SMNDC1-202ENST00000369603 IGLV5-52A0A0A0MRZ9 124 aa3.55□□□□□ -1.84
SMNDC1-202ENST00000369603 H0Y9J4 135 aa3.55□□□□□ -1.84
SMNDC1-202ENST00000369603 NDUFS5O43920 106 aa3.54□□□□□ -1.84
SMNDC1-202ENST00000369603 LINC01547P58512 204 aaPredicted RBP3.54□□□□□ -1.84
SMNDC1-202ENST00000369603 SETXQ7Z333 2677 aaKnown RBP3.54□□□□□ -1.84
SMNDC1-202ENST00000369603 A0A1B0GW54 56 aa3.54□□□□□ -1.84
SMNDC1-202ENST00000369603 C16orf90A8MZG2 172 aa3.54□□□□□ -1.84
SMNDC1-202ENST00000369603 Q6ZRP5 223 aa3.54□□□□□ -1.84
SMNDC1-202ENST00000369603 C15orf56Q8N910 161 aa3.54□□□□□ -1.84
SMNDC1-202ENST00000369603 KALRNO60229 2985 aa3.54□□□□□ -1.84
SMNDC1-202ENST00000369603 UTP20O75691 2785 aaKnown RBP3.53□□□□□ -1.84
SMNDC1-202ENST00000369603 LOC110117498A0A087WWA1 95 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms