RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 SPANXDQ9BXN6 97 aa7.04□□□□□ -1.28
BRCC3-204ENST00000369462 SND1-IT1Q9HBX3 110 aa7.04□□□□□ -1.28
BRCC3-204ENST00000369462 SPANXB1Q9NS25 103 aaPredicted RBP7.04□□□□□ -1.28
BRCC3-204ENST00000369462 SPANXCQ9NY87 97 aa7.04□□□□□ -1.28
BRCC3-204ENST00000369462 GAGE10A6NGK3 116 aa7.04□□□□□ -1.28
BRCC3-204ENST00000369462 CTAG1AP78358 180 aa7.03□□□□□ -1.28
BRCC3-204ENST00000369462 SDIM1Q6ZPB5 146 aa7.03□□□□□ -1.28
BRCC3-204ENST00000369462 IGKV2-24A0A0C4DH68 120 aa7.03□□□□□ -1.28
BRCC3-204ENST00000369462 GCSHP23434 173 aa7.03□□□□□ -1.28
BRCC3-204ENST00000369462 Q6ZVH6 145 aa7.03□□□□□ -1.28
BRCC3-204ENST00000369462 MUSTN1Q8IVN3 82 aa7.03□□□□□ -1.28
BRCC3-204ENST00000369462 LINC00308Q8TCZ7 52 aa7.03□□□□□ -1.28
BRCC3-204ENST00000369462 A0A096LNI7 61 aa7.02□□□□□ -1.29
BRCC3-204ENST00000369462 SOSTDC1Q6X4U4 206 aa7.02□□□□□ -1.29
BRCC3-204ENST00000369462 DNAH5Q8TE73 4624 aa7.01□□□□□ -1.29
BRCC3-204ENST00000369462 PKHD1P08F94 4074 aa7.01□□□□□ -1.29
BRCC3-204ENST00000369462 C16orf90A8MZG2 172 aa7.01□□□□□ -1.29
BRCC3-204ENST00000369462 CHTF8P0CG12 524 aa7.01□□□□□ -1.29
BRCC3-204ENST00000369462 IFITM1P13164 125 aa7.01□□□□□ -1.29
BRCC3-204ENST00000369462 HSD52Q0P140 79 aa7.01□□□□□ -1.29
BRCC3-204ENST00000369462 TAL2Q16559 108 aa7□□□□□ -1.29
BRCC3-204ENST00000369462 C9orf129Q5T035 196 aaKnown RBP7□□□□□ -1.29
BRCC3-204ENST00000369462 A0A1B0GVY2 172 aa7□□□□□ -1.29
BRCC3-204ENST00000369462 CEND1Q8N111 149 aa7□□□□□ -1.29
BRCC3-204ENST00000369462 PKIGQ9Y2B9 76 aa7□□□□□ -1.29
BRCC3-204ENST00000369462 COPS9Q8WXC6 57 aa6.99□□□□□ -1.29
BRCC3-204ENST00000369462 LOC107984156A0A0G2JMH3 177 aa6.99□□□□□ -1.29
BRCC3-204ENST00000369462 ARL17AQ8IVW1 177 aa6.99□□□□□ -1.29
BRCC3-204ENST00000369462 PANO1I0J062 215 aa6.98□□□□□ -1.29
BRCC3-204ENST00000369462 HINT1P49773 126 aaPredicted RBP6.98□□□□□ -1.29
BRCC3-204ENST00000369462 RPL24P83731 157 aaKnown RBP6.98□□□□□ -1.29
BRCC3-204ENST00000369462 DPH3Q96FX2 82 aa6.98□□□□□ -1.29
BRCC3-204ENST00000369462 FAM168BA1KXE4 195 aa6.98□□□□□ -1.29
BRCC3-204ENST00000369462 FXYD2P54710 66 aa6.98□□□□□ -1.29
BRCC3-204ENST00000369462 Q8NDZ9 215 aa6.98□□□□□ -1.29
BRCC3-204ENST00000369462 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.98□□□□□ -1.29
BRCC3-204ENST00000369462 PRR3P79522 188 aaKnown RBP6.97□□□□□ -1.29
BRCC3-204ENST00000369462 KRTAP10-1P60331 282 aa6.97□□□□□ -1.29
BRCC3-204ENST00000369462 LINC00474Q9P2X8 69 aa6.97□□□□□ -1.29
BRCC3-204ENST00000369462 BVES-AS1Q5T3Y7 98 aa6.96□□□□□ -1.3
BRCC3-204ENST00000369462 SERTAD4-AS1Q5TG53 156 aa6.96□□□□□ -1.3
BRCC3-204ENST00000369462 FAM19A5Q7Z5A7 132 aaPredicted RBP6.95□□□□□ -1.3
BRCC3-204ENST00000369462 A0A1W2PNN7 141 aa6.95□□□□□ -1.3
BRCC3-204ENST00000369462 M0R143 59 aa6.95□□□□□ -1.3
BRCC3-204ENST00000369462 BATFQ16520 125 aa6.95□□□□□ -1.3
BRCC3-204ENST00000369462 SPACA4Q8TDM5 124 aa6.95□□□□□ -1.3
BRCC3-204ENST00000369462 PPDPFQ9H3Y8 114 aa6.95□□□□□ -1.3
BRCC3-204ENST00000369462 VPREB1P12018 145 aa6.95□□□□□ -1.3
BRCC3-204ENST00000369462 KRTAP7-1Q8IUC3 87 aa6.95□□□□□ -1.3
BRCC3-204ENST00000369462 FAM30AQ9NZY2 134 aa6.95□□□□□ -1.3
BRCC3-204ENST00000369462 NDUFC2O95298 119 aa6.94□□□□□ -1.3
BRCC3-204ENST00000369462 IGKV2-28A0A075B6P5 120 aa6.94□□□□□ -1.3
BRCC3-204ENST00000369462 NCR3O14931 201 aa6.94□□□□□ -1.3
BRCC3-204ENST00000369462 IGKV2D-28P01615 120 aa6.94□□□□□ -1.3
BRCC3-204ENST00000369462 NHP2Q9NX24 153 aaKnown RBP6.94□□□□□ -1.3
BRCC3-204ENST00000369462 A0A087WYN8 130 aa6.93□□□□□ -1.3
BRCC3-204ENST00000369462 NKAPP1Q8N9T2 125 aa6.93□□□□□ -1.3
BRCC3-204ENST00000369462 CFC1BP0CG36 223 aa6.93□□□□□ -1.3
BRCC3-204ENST00000369462 CFC1P0CG37 223 aa6.93□□□□□ -1.3
BRCC3-204ENST00000369462 LRP1BQ9NZR2 4599 aa6.92□□□□□ -1.3
BRCC3-204ENST00000369462 C22orf24Q9Y442 160 aa6.92□□□□□ -1.3
BRCC3-204ENST00000369462 LINC00337Q8N6G1 96 aa6.92□□□□□ -1.3
BRCC3-204ENST00000369462 A6NDN8 102 aa6.91□□□□□ -1.3
BRCC3-204ENST00000369462 K7ERJ3 54 aa6.91□□□□□ -1.3
BRCC3-204ENST00000369462 M0QXV9 152 aa6.91□□□□□ -1.3
BRCC3-204ENST00000369462 PCP4P48539 62 aa6.91□□□□□ -1.3
BRCC3-204ENST00000369462 Q6ZSA8 131 aa6.91□□□□□ -1.3
BRCC3-204ENST00000369462 OR13C6PQ8NH95 151 aa6.91□□□□□ -1.3
BRCC3-204ENST00000369462 SNHG12Q9BXW3 62 aa6.91□□□□□ -1.3
BRCC3-204ENST00000369462 DYNC1H1Q14204 4646 aaKnown RBP6.91□□□□□ -1.3
BRCC3-204ENST00000369462 RAB37Q96AX2 223 aa6.91□□□□□ -1.3
BRCC3-204ENST00000369462 IGLV5-37A0A075B6J1 123 aa6.9□□□□□ -1.3
BRCC3-204ENST00000369462 TRBV10-2A0A0K0K1G8 114 aa6.9□□□□□ -1.3
BRCC3-204ENST00000369462 M0R378 163 aa6.9□□□□□ -1.3
BRCC3-204ENST00000369462 HAMPP81172 84 aa6.9□□□□□ -1.3
BRCC3-204ENST00000369462 S100A7L2Q5SY68 101 aa6.9□□□□□ -1.31
BRCC3-204ENST00000369462 MRPL55Q7Z7F7 128 aaKnown RBP6.9□□□□□ -1.31
BRCC3-204ENST00000369462 C7orf33Q8WU49 177 aa6.9□□□□□ -1.31
BRCC3-204ENST00000369462 A0A0B4J2C4 111 aa6.89□□□□□ -1.31
BRCC3-204ENST00000369462 CIRBP-AS1Q8TBR5 109 aa6.89□□□□□ -1.31
BRCC3-204ENST00000369462 PLAC8Q9NZF1 115 aa6.89□□□□□ -1.31
BRCC3-204ENST00000369462 DNAH8Q96JB1 4490 aa6.89□□□□□ -1.31
BRCC3-204ENST00000369462 TRAV13-2A0A0B4J235 113 aa6.89□□□□□ -1.31
BRCC3-204ENST00000369462 A0A1B0GWB2 263 aa6.89□□□□□ -1.31
BRCC3-204ENST00000369462 PHF5AQ7RTV0 110 aaKnown RBP6.89□□□□□ -1.31
BRCC3-204ENST00000369462 LINC00167Q96N53 147 aa6.89□□□□□ -1.31
BRCC3-204ENST00000369462 RPL37AP8A6NKH3 93 aa6.88□□□□□ -1.31
BRCC3-204ENST00000369462 SCXQ7RTU7 201 aa6.88□□□□□ -1.31
BRCC3-204ENST00000369462 PRO1854Q9UHT4 67 aa6.88□□□□□ -1.31
BRCC3-204ENST00000369462 TRBV10-3A0A0K0K1G6 114 aa6.88□□□□□ -1.31
BRCC3-204ENST00000369462 H7C2G1 150 aa6.88□□□□□ -1.31
BRCC3-204ENST00000369462 TMEM126AQ9H061 195 aa6.88□□□□□ -1.31
BRCC3-204ENST00000369462 RPL13AP40429 203 aaKnown RBP6.87□□□□□ -1.31
BRCC3-204ENST00000369462 EPM2AB3EWF7 344 aa6.87□□□□□ -1.31
BRCC3-204ENST00000369462 IGLV6-57P01721 117 aa6.86□□□□□ -1.31
BRCC3-204ENST00000369462 EPPK1P58107 5090 aaKnown RBP6.86□□□□□ -1.31
BRCC3-204ENST00000369462 A0A0A0MQY5 61 aa6.86□□□□□ -1.31
BRCC3-204ENST00000369462 UBE2BP63146 152 aa6.86□□□□□ -1.31
BRCC3-204ENST00000369462 IGLV1-50A0A075B6I6 118 aa6.85□□□□□ -1.31
BRCC3-204ENST00000369462 Q1RN00 199 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms