RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 IGKV2-30P06310 120 aa8.86□□□□□ -0.99
PTPRK-207ENST00000368226 V9GYY9 64 aa8.86□□□□□ -0.99
PTPRK-207ENST00000368226 RTL8CO15255 209 aa8.85□□□□□ -0.99
PTPRK-207ENST00000368226 LINC01561Q8N1V8 128 aa8.85□□□□□ -0.99
PTPRK-207ENST00000368226 LINC00588Q9Y4M8 146 aa8.85□□□□□ -0.99
PTPRK-207ENST00000368226 IGLV5-39A0A0G2JS06 123 aa8.85□□□□□ -0.99
PTPRK-207ENST00000368226 PCSK5Q92824 1860 aa8.84□□□□□ -0.99
PTPRK-207ENST00000368226 POLQO75417 2590 aa8.84□□□□□ -0.99
PTPRK-207ENST00000368226 USP9YO00507 2555 aaPredicted RBP8.84□□□□□ -0.99
PTPRK-207ENST00000368226 MUC4Q99102 2169 aa8.83□□□□□ -1
PTPRK-207ENST00000368226 Q8NAQ8 132 aa8.83□□□□□ -1
PTPRK-207ENST00000368226 LIMD2Q9BT23 127 aa8.83□□□□□ -1
PTPRK-207ENST00000368226 TRBV7-7A0A0K0K1E9 115 aa8.81□□□□□ -1
PTPRK-207ENST00000368226 NBDYA0A0U1RRE5 68 aa8.81□□□□□ -1
PTPRK-207ENST00000368226 C16orf90A8MZG2 172 aa8.81□□□□□ -1
PTPRK-207ENST00000368226 PSPHP1O15172 72 aa8.81□□□□□ -1
PTPRK-207ENST00000368226 SMIM29Q86T20 159 aa8.81□□□□□ -1
PTPRK-207ENST00000368226 FAM218AQ96MZ4 157 aa8.8□□□□□ -1
PTPRK-207ENST00000368226 ST20-AS1Q8NBB2 130 aa8.8□□□□□ -1
PTPRK-207ENST00000368226 CRYGAP11844 174 aa8.8□□□□□ -1
PTPRK-207ENST00000368226 SPATA3Q8NHX4 192 aa8.8□□□□□ -1
PTPRK-207ENST00000368226 FAM168BA1KXE4 195 aa8.78□□□□□ -1
PTPRK-207ENST00000368226 MTORP42345 2549 aa8.78□□□□□ -1
PTPRK-207ENST00000368226 LINC01546A6NGU7 62 aa8.78□□□□□ -1
PTPRK-207ENST00000368226 ANKRD17O75179 2603 aaKnown RBP8.77□□□□□ -1.01
PTPRK-207ENST00000368226 KRTAP10-11P60412 298 aa8.77□□□□□ -1.01
PTPRK-207ENST00000368226 EPM2AB3EWF7 344 aa8.77□□□□□ -1.01
PTPRK-207ENST00000368226 PKD1L2Q7Z442 2459 aa8.76□□□□□ -1.01
PTPRK-207ENST00000368226 C7orf65Q6ZTY9 151 aa8.76□□□□□ -1.01
PTPRK-207ENST00000368226 C1orf64Q8NEQ6 169 aa8.76□□□□□ -1.01
PTPRK-207ENST00000368226 ACANP16112 2415 aa8.75□□□□□ -1.01
PTPRK-207ENST00000368226 FAM229AH3BQW9 127 aa8.75□□□□□ -1.01
PTPRK-207ENST00000368226 TMEM254Q8TBM7 123 aa8.75□□□□□ -1.01
PTPRK-207ENST00000368226 RPL37AP61513 92 aaKnown RBP8.74□□□□□ -1.01
PTPRK-207ENST00000368226 FASNP49327 2511 aaKnown RBP8.74□□□□□ -1.01
PTPRK-207ENST00000368226 DNAH10OSP0CZ25 163 aa8.74□□□□□ -1.01
PTPRK-207ENST00000368226 H3BNG1 76 aa8.73□□□□□ -1.01
PTPRK-207ENST00000368226 ELOF1P60002 83 aaKnown RBP8.73□□□□□ -1.01
PTPRK-207ENST00000368226 Q6ZRP5 223 aa8.73□□□□□ -1.01
PTPRK-207ENST00000368226 TYMSOSQ8TAI1 123 aa8.73□□□□□ -1.01
PTPRK-207ENST00000368226 SMIM26A0A096LP01 95 aa8.72□□□□□ -1.01
PTPRK-207ENST00000368226 LINC00476Q8WZB0 136 aa8.72□□□□□ -1.01
PTPRK-207ENST00000368226 KRTAP10-3P60369 221 aa8.72□□□□□ -1.01
PTPRK-207ENST00000368226 IGLV5-45A0A087WSX0 123 aa8.71□□□□□ -1.01
PTPRK-207ENST00000368226 WWC2-AS2Q96NR7 200 aa8.71□□□□□ -1.02
PTPRK-207ENST00000368226 Q6ZRX8 168 aa8.71□□□□□ -1.02
PTPRK-207ENST00000368226 hDV103S1A0JD37 113 aa8.7□□□□□ -1.02
PTPRK-207ENST00000368226 K7EIL1 84 aa8.7□□□□□ -1.02
PTPRK-207ENST00000368226 SMCPP49901 116 aaPredicted RBP8.68□□□□□ -1.02
PTPRK-207ENST00000368226 CDIP1Q9H305 208 aa8.68□□□□□ -1.02
PTPRK-207ENST00000368226 CXCL6P80162 114 aa8.68□□□□□ -1.02
PTPRK-207ENST00000368226 SERTAD4-AS1Q5TG53 156 aa8.67□□□□□ -1.02
PTPRK-207ENST00000368226 CEP350Q5VT06 3117 aa8.66□□□□□ -1.02
PTPRK-207ENST00000368226 GVQW2A0A096LPI5 108 aaPredicted RBP8.66□□□□□ -1.02
PTPRK-207ENST00000368226 PMAIP1Q13794 54 aa8.66□□□□□ -1.02
PTPRK-207ENST00000368226 Q8NBF4 154 aa8.65□□□□□ -1.02
PTPRK-207ENST00000368226 C1orf195Q5TG92 126 aa8.64□□□□□ -1.03
PTPRK-207ENST00000368226 CSNK1G2-AS1Q8NCQ2 148 aa8.64□□□□□ -1.03
PTPRK-207ENST00000368226 Q96NJ1 140 aa8.64□□□□□ -1.03
PTPRK-207ENST00000368226 LINC00313P59037 77 aa8.63□□□□□ -1.03
PTPRK-207ENST00000368226 Q6ZQT0 140 aa8.63□□□□□ -1.03
PTPRK-207ENST00000368226 J3QL48 77 aa8.63□□□□□ -1.03
PTPRK-207ENST00000368226 BCE1O60756 84 aa8.63□□□□□ -1.03
PTPRK-207ENST00000368226 C5orf42Q9H799 3197 aa8.62□□□□□ -1.03
PTPRK-207ENST00000368226 SMR3BP02814 79 aaPredicted RBP8.62□□□□□ -1.03
PTPRK-207ENST00000368226 PLA2G1BP04054 148 aaKnown RBP8.61□□□□□ -1.03
PTPRK-207ENST00000368226 A0A096LNT2 108 aa8.61□□□□□ -1.03
PTPRK-207ENST00000368226 IGLV8-61A0A075B6I0 122 aa8.6□□□□□ -1.03
PTPRK-207ENST00000368226 VPREB1P12018 145 aa8.6□□□□□ -1.03
PTPRK-207ENST00000368226 A0A0G2JQZ4 141 aa8.59□□□□□ -1.03
PTPRK-207ENST00000368226 A0A1W2PNN7 141 aa8.59□□□□□ -1.03
PTPRK-207ENST00000368226 PCNTO95613 3336 aa8.58□□□□□ -1.04
PTPRK-207ENST00000368226 SPAG11AQ6PDA7 123 aa8.58□□□□□ -1.04
PTPRK-207ENST00000368226 LITAFQ99732 161 aa8.58□□□□□ -1.04
PTPRK-207ENST00000368226 F8P00451 2351 aa8.58□□□□□ -1.04
PTPRK-207ENST00000368226 A0A1B0GU69 56 aa8.57□□□□□ -1.04
PTPRK-207ENST00000368226 ANAPC11Q9NYG5 84 aa8.56□□□□□ -1.04
PTPRK-207ENST00000368226 GIG44P09565 113 aaPredicted RBP8.56□□□□□ -1.04
PTPRK-207ENST00000368226 PRO0461Q9UI25 63 aa8.56□□□□□ -1.04
PTPRK-207ENST00000368226 EIF4EBP3O60516 100 aaPredicted RBP8.55□□□□□ -1.04
PTPRK-207ENST00000368226 TM2D3Q9BRN9 247 aa8.55□□□□□ -1.04
PTPRK-207ENST00000368226 C19orf73Q9NVV2 129 aa8.55□□□□□ -1.04
PTPRK-207ENST00000368226 C9orf92A6NGG3 77 aa8.54□□□□□ -1.04
PTPRK-207ENST00000368226 EPG5Q9HCE0 2579 aa8.54□□□□□ -1.04
PTPRK-207ENST00000368226 IGLV1-50A0A075B6I6 118 aa8.54□□□□□ -1.04
PTPRK-207ENST00000368226 C15orf56Q8N910 161 aa8.54□□□□□ -1.04
PTPRK-207ENST00000368226 TP53AIP1Q9HCN2 124 aa8.54□□□□□ -1.04
PTPRK-207ENST00000368226 IGLV6-57P01721 117 aa8.54□□□□□ -1.04
PTPRK-207ENST00000368226 KLK9Q2XQG4 91 aa8.54□□□□□ -1.04
PTPRK-207ENST00000368226 ACYP2P14621 99 aa8.53□□□□□ -1.04
PTPRK-207ENST00000368226 LOC110117498A0A087WWA1 95 aa8.53□□□□□ -1.04
PTPRK-207ENST00000368226 ATP11AUNQ6ZP68 121 aa8.53□□□□□ -1.04
PTPRK-207ENST00000368226 K7EQZ3 153 aa8.52□□□□□ -1.05
PTPRK-207ENST00000368226 CASC10Q5T4H9 136 aa8.52□□□□□ -1.05
PTPRK-207ENST00000368226 DSCR10P59022 87 aa8.51□□□□□ -1.05
PTPRK-207ENST00000368226 KRTAP1-3Q8IUG1 177 aa8.51□□□□□ -1.05
PTPRK-207ENST00000368226 PRRC2CQ9Y520 2896 aaKnown RBP8.51□□□□□ -1.05
PTPRK-207ENST00000368226 C9orf129Q5T035 196 aaKnown RBP8.51□□□□□ -1.05
PTPRK-207ENST00000368226 TRAV22A0A0B4J277 110 aa8.5□□□□□ -1.05
PTPRK-207ENST00000368226 HECTD1Q9ULT8 2610 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms