RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 F8P00451 2351 aa9.31□□□□□ -0.92
PTPRK-204ENST00000368210 SMCR5Q8TEV8 140 aa9.29□□□□□ -0.92
PTPRK-204ENST00000368210 BPTFQ12830 3046 aa9.29□□□□□ -0.92
PTPRK-204ENST00000368210 HECTD1Q9ULT8 2610 aa9.29□□□□□ -0.92
PTPRK-204ENST00000368210 HCG22E2RYF7 251 aa9.28□□□□□ -0.92
PTPRK-204ENST00000368210 LINC00474Q9P2X8 69 aa9.28□□□□□ -0.92
PTPRK-204ENST00000368210 M0R2N4 97 aa9.28□□□□□ -0.92
PTPRK-204ENST00000368210 BRCA2P51587 3418 aa9.28□□□□□ -0.92
PTPRK-204ENST00000368210 LYPD5Q6UWN5 251 aa9.27□□□□□ -0.93
PTPRK-204ENST00000368210 IGLV5-39A0A0G2JS06 123 aa9.27□□□□□ -0.93
PTPRK-204ENST00000368210 LINC00575Q6W349 94 aa9.27□□□□□ -0.93
PTPRK-204ENST00000368210 LINC00337Q8N6G1 96 aa9.27□□□□□ -0.93
PTPRK-204ENST00000368210 Q9UF83 564 aa9.27□□□□□ -0.93
PTPRK-204ENST00000368210 FSHBP01225 129 aa9.26□□□□□ -0.93
PTPRK-204ENST00000368210 KLKP1Q107X0 134 aa9.26□□□□□ -0.93
PTPRK-204ENST00000368210 KTN1-AS1Q86SY8 53 aa9.26□□□□□ -0.93
PTPRK-204ENST00000368210 C6orf223Q8N319 242 aa9.26□□□□□ -0.93
PTPRK-204ENST00000368210 IGHV3OR16-9A0A0B4J2B5 98 aa9.25□□□□□ -0.93
PTPRK-204ENST00000368210 ERC2-IT1O76042 136 aa9.24□□□□□ -0.93
PTPRK-204ENST00000368210 H0Y9P7 68 aa9.23□□□□□ -0.93
PTPRK-204ENST00000368210 CYP4F30PQ9H0H9 118 aa9.23□□□□□ -0.93
PTPRK-204ENST00000368210 TM2D3Q9BRN9 247 aa9.22□□□□□ -0.93
PTPRK-204ENST00000368210 LAMA2P24043 3122 aaKnown RBP9.22□□□□□ -0.93
PTPRK-204ENST00000368210 C8orf87E5RJ46 101 aa9.22□□□□□ -0.93
PTPRK-204ENST00000368210 A0A0C4DFX4 3053 aa9.22□□□□□ -0.93
PTPRK-204ENST00000368210 CENPEQ02224 2701 aa9.22□□□□□ -0.93
PTPRK-204ENST00000368210 FAM218AQ96MZ4 157 aa9.22□□□□□ -0.93
PTPRK-204ENST00000368210 SPAG11AQ6PDA7 123 aa9.22□□□□□ -0.93
PTPRK-204ENST00000368210 C1orf137Q5JT78 98 aa9.21□□□□□ -0.93
PTPRK-204ENST00000368210 C2orf48Q96LS8 159 aa9.21□□□□□ -0.93
PTPRK-204ENST00000368210 C10orf25Q5T742 122 aa9.21□□□□□ -0.94
PTPRK-204ENST00000368210 H7BZZ5 65 aa9.2□□□□□ -0.94
PTPRK-204ENST00000368210 IGLV5-45A0A087WSX0 123 aa9.2□□□□□ -0.94
PTPRK-204ENST00000368210 USP24Q9UPU5 2620 aa9.19□□□□□ -0.94
PTPRK-204ENST00000368210 A8MUN3 132 aa9.19□□□□□ -0.94
PTPRK-204ENST00000368210 ATP11AUNQ6ZP68 121 aa9.19□□□□□ -0.94
PTPRK-204ENST00000368210 SMIM29Q86T20 159 aa9.19□□□□□ -0.94
PTPRK-204ENST00000368210 C7orf33Q8WU49 177 aa9.19□□□□□ -0.94
PTPRK-204ENST00000368210 LCA10Q71F78 164 aa9.18□□□□□ -0.94
PTPRK-204ENST00000368210 PRR15Q8IV56 129 aa9.18□□□□□ -0.94
PTPRK-204ENST00000368210 X6R8D5 127 aa9.18□□□□□ -0.94
PTPRK-204ENST00000368210 NUPR2A6NF83 97 aa9.17□□□□□ -0.94
PTPRK-204ENST00000368210 LY6G6CO95867 125 aa9.17□□□□□ -0.94
PTPRK-204ENST00000368210 Q6ZRU5 148 aa9.17□□□□□ -0.94
PTPRK-204ENST00000368210 C7orf65Q6ZTY9 151 aa9.17□□□□□ -0.94
PTPRK-204ENST00000368210 SPATA3Q8NHX4 192 aa9.16□□□□□ -0.94
PTPRK-204ENST00000368210 ZNF706Q9Y5V0 76 aaPredicted RBP9.16□□□□□ -0.94
PTPRK-204ENST00000368210 PRUNE2Q8WUY3 3088 aa9.16□□□□□ -0.94
PTPRK-204ENST00000368210 A8MTW9 85 aa9.16□□□□□ -0.94
PTPRK-204ENST00000368210 LOC110117498A0A087WWA1 95 aa9.15□□□□□ -0.94
PTPRK-204ENST00000368210 PCOTHQ58A44 107 aa9.15□□□□□ -0.94
PTPRK-204ENST00000368210 CFAP54Q96N23 3096 aa9.15□□□□□ -0.94
PTPRK-204ENST00000368210 Q6ZQT0 140 aa9.15□□□□□ -0.94
PTPRK-204ENST00000368210 MDFIQ99750 246 aa9.14□□□□□ -0.95
PTPRK-204ENST00000368210 REG3GQ6UW15 175 aa9.14□□□□□ -0.95
PTPRK-204ENST00000368210 C1orf64Q8NEQ6 169 aa9.14□□□□□ -0.95
PTPRK-204ENST00000368210 H3BPC8 53 aa9.13□□□□□ -0.95
PTPRK-204ENST00000368210 FLNAP21333 2647 aaKnown RBP9.12□□□□□ -0.95
PTPRK-204ENST00000368210 IGLV9-49A0A0B4J1Y8 123 aa9.12□□□□□ -0.95
PTPRK-204ENST00000368210 SPINK6Q6UWN8 80 aa9.12□□□□□ -0.95
PTPRK-204ENST00000368210 A0A096LNT2 108 aa9.12□□□□□ -0.95
PTPRK-204ENST00000368210 MGAM2Q2M2H8 2515 aa9.11□□□□□ -0.95
PTPRK-204ENST00000368210 MGAQ8IWI9 3026 aa9.11□□□□□ -0.95
PTPRK-204ENST00000368210 A0A1B0GW54 56 aa9.11□□□□□ -0.95
PTPRK-204ENST00000368210 ZNF292O60281 2723 aa9.11□□□□□ -0.95
PTPRK-204ENST00000368210 LINC01556Q5JQF7 62 aa9.1□□□□□ -0.95
PTPRK-204ENST00000368210 UNC80Q8N2C7 3258 aa9.1□□□□□ -0.95
PTPRK-204ENST00000368210 LITAFQ99732 161 aa9.1□□□□□ -0.95
PTPRK-204ENST00000368210 RETNLBQ9BQ08 111 aa9.1□□□□□ -0.95
PTPRK-204ENST00000368210 TRAV22A0A0B4J277 110 aa9.09□□□□□ -0.95
PTPRK-204ENST00000368210 Q5XG85 94 aa9.08□□□□□ -0.96
PTPRK-204ENST00000368210 ITPR3Q14573 2671 aa9.07□□□□□ -0.96
PTPRK-204ENST00000368210 H3BNG1 76 aa9.07□□□□□ -0.96
PTPRK-204ENST00000368210 Q8NAQ8 132 aa9.07□□□□□ -0.96
PTPRK-204ENST00000368210 KRTAP24-1Q3LI83 254 aa9.07□□□□□ -0.96
PTPRK-204ENST00000368210 WDFY4Q6ZS81 3184 aa9.06□□□□□ -0.96
PTPRK-204ENST00000368210 C6orf48Q9UBA6 75 aa9.06□□□□□ -0.96
PTPRK-204ENST00000368210 A0A1B0GU69 56 aa9.06□□□□□ -0.96
PTPRK-204ENST00000368210 LINC01600Q96MT4 127 aa9.06□□□□□ -0.96
PTPRK-204ENST00000368210 CFAP46Q8IYW2 2715 aa9.05□□□□□ -0.96
PTPRK-204ENST00000368210 LOC101927531A0A1B0GV80 90 aa9.04□□□□□ -0.96
PTPRK-204ENST00000368210 HELZ2Q9BYK8 2649 aaKnown RBP9.04□□□□□ -0.96
PTPRK-204ENST00000368210 C22orf24Q9Y442 160 aa9.04□□□□□ -0.96
PTPRK-204ENST00000368210 ATRQ13535 2644 aa9.03□□□□□ -0.96
PTPRK-204ENST00000368210 Q9BRP9 147 aa9.03□□□□□ -0.96
PTPRK-204ENST00000368210 TRIOO75962 3097 aa9.02□□□□□ -0.96
PTPRK-204ENST00000368210 ELOF1P60002 83 aaKnown RBP9.02□□□□□ -0.97
PTPRK-204ENST00000368210 RBM12B-AS1Q9P1G2 102 aa9.02□□□□□ -0.97
PTPRK-204ENST00000368210 A0A087WSZ3 146 aa9.02□□□□□ -0.97
PTPRK-204ENST00000368210 CSNK1G2-AS1Q8NCQ2 148 aa9.02□□□□□ -0.97
PTPRK-204ENST00000368210 DEFB116Q30KQ4 102 aa9.02□□□□□ -0.97
PTPRK-204ENST00000368210 IGLV5-52A0A0A0MRZ9 124 aa9.01□□□□□ -0.97
PTPRK-204ENST00000368210 H3BS24 57 aa9.01□□□□□ -0.97
PTPRK-204ENST00000368210 PRLHP81277 87 aa9.01□□□□□ -0.97
PTPRK-204ENST00000368210 XIRP2A4UGR9 3374 aa8.98□□□□□ -0.97
PTPRK-204ENST00000368210 MAST4O15021 2626 aa8.98□□□□□ -0.97
PTPRK-204ENST00000368210 TP53AIP1Q9HCN2 124 aa8.98□□□□□ -0.97
PTPRK-204ENST00000368210 LINC00167Q96N53 147 aa8.97□□□□□ -0.97
PTPRK-204ENST00000368210 C1orf134Q5TEV5 83 aa8.97□□□□□ -0.97
PTPRK-204ENST00000368210 GIG44P09565 113 aaPredicted RBP8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms