RNA–Protein interactions for RNA: ENST00000366690.4

RAB4A-201, Transcript of RAB4A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB4A, Length 2,966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4A-201ENST00000366690 NOTCH1P46531 2555 aa12.52□□□□□ -0.4
RAB4A-201ENST00000366690 ANK2Q01484 3957 aa12.52□□□□□ -0.41
RAB4A-201ENST00000366690 HIGD2BQ4VC39 106 aa12.52□□□□□ -0.41
RAB4A-201ENST00000366690 LINC01561Q8N1V8 128 aa12.52□□□□□ -0.41
RAB4A-201ENST00000366690 SPART-AS1P0CW21 52 aa12.51□□□□□ -0.41
RAB4A-201ENST00000366690 COX17Q14061 63 aa12.51□□□□□ -0.41
RAB4A-201ENST00000366690 ENHOQ6UWT2 76 aa12.51□□□□□ -0.41
RAB4A-201ENST00000366690 CYSTM1Q9H1C7 97 aa12.5□□□□□ -0.41
RAB4A-201ENST00000366690 A0A1B0GX51 115 aa12.5□□□□□ -0.41
RAB4A-201ENST00000366690 CCKP06307 115 aa12.5□□□□□ -0.41
RAB4A-201ENST00000366690 FLNBO75369 2602 aaKnown RBP12.49□□□□□ -0.41
RAB4A-201ENST00000366690 NDUFC2O95298 119 aa12.49□□□□□ -0.41
RAB4A-201ENST00000366690 FBN1P35555 2871 aaKnown RBP12.49□□□□□ -0.41
RAB4A-201ENST00000366690 M0R2N4 97 aa12.48□□□□□ -0.41
RAB4A-201ENST00000366690 LELP1Q5T871 98 aa12.48□□□□□ -0.41
RAB4A-201ENST00000366690 TMEM256-PLSCR3K7ERE1 68 aa12.48□□□□□ -0.41
RAB4A-201ENST00000366690 LAMTOR3Q9UHA4 124 aa12.48□□□□□ -0.41
RAB4A-201ENST00000366690 MAST4O15021 2626 aa12.47□□□□□ -0.41
RAB4A-201ENST00000366690 hADV29S1A0JD25 119 aa12.47□□□□□ -0.41
RAB4A-201ENST00000366690 WFDC10BQ8IUB3 73 aa12.47□□□□□ -0.41
RAB4A-201ENST00000366690 UQCRQO14949 82 aa12.47□□□□□ -0.41
RAB4A-201ENST00000366690 Q6JHZ5 121 aa12.47□□□□□ -0.41
RAB4A-201ENST00000366690 F8P00451 2351 aa12.46□□□□□ -0.41
RAB4A-201ENST00000366690 MIFP14174 115 aa12.46□□□□□ -0.41
RAB4A-201ENST00000366690 LINC00575Q6W349 94 aa12.46□□□□□ -0.42
RAB4A-201ENST00000366690 FAM19A1Q7Z5A9 133 aa12.46□□□□□ -0.42
RAB4A-201ENST00000366690 TRBV10-3A0A0K0K1G6 114 aa12.45□□□□□ -0.42
RAB4A-201ENST00000366690 OXLD1Q5BKU9 147 aa12.45□□□□□ -0.42
RAB4A-201ENST00000366690 C2orf48Q96LS8 159 aa12.45□□□□□ -0.42
RAB4A-201ENST00000366690 LINC00167Q96N53 147 aa12.45□□□□□ -0.42
RAB4A-201ENST00000366690 C6orf48Q9UBA6 75 aa12.45□□□□□ -0.42
RAB4A-201ENST00000366690 COX7CP15954 63 aa12.45□□□□□ -0.42
RAB4A-201ENST00000366690 Q6ZQY7 126 aa12.45□□□□□ -0.42
RAB4A-201ENST00000366690 LYPD5Q6UWN5 251 aa12.44□□□□□ -0.42
RAB4A-201ENST00000366690 TRAV23DV6A0A075B6W5 121 aa12.43□□□□□ -0.42
RAB4A-201ENST00000366690 JMJD7-PLA2G4BH0Y9G9 81 aa12.43□□□□□ -0.42
RAB4A-201ENST00000366690 USP17L23D6RBM5 183 aa12.42□□□□□ -0.42
RAB4A-201ENST00000366690 ATOX1O00244 68 aa12.42□□□□□ -0.42
RAB4A-201ENST00000366690 PRR34Q9NV39 138 aa12.41□□□□□ -0.42
RAB4A-201ENST00000366690 LOC107984640A0A0U1RRK4 108 aa12.39□□□□□ -0.43
RAB4A-201ENST00000366690 RBM3P98179 157 aaKnown RBP12.39□□□□□ -0.43
RAB4A-201ENST00000366690 Q6ZTC4 211 aa12.39□□□□□ -0.43
RAB4A-201ENST00000366690 A0A0J9YWU9 116 aa12.38□□□□□ -0.43
RAB4A-201ENST00000366690 KPRPQ5T749 579 aaPredicted RBP12.38□□□□□ -0.43
RAB4A-201ENST00000366690 IGLV6-57P01721 117 aa12.38□□□□□ -0.43
RAB4A-201ENST00000366690 CAMK2N2Q96S95 79 aa12.38□□□□□ -0.43
RAB4A-201ENST00000366690 BAHCC1Q9P281 2608 aa12.38□□□□□ -0.43
RAB4A-201ENST00000366690 ZNF561-AS1K7EIQ3 104 aa12.37□□□□□ -0.43
RAB4A-201ENST00000366690 UBL5Q9BZL1 73 aa12.35□□□□□ -0.43
RAB4A-201ENST00000366690 HAMPP81172 84 aa12.35□□□□□ -0.43
RAB4A-201ENST00000366690 Q6ZQT0 140 aa12.34□□□□□ -0.43
RAB4A-201ENST00000366690 Q6ZRU5 148 aa12.34□□□□□ -0.43
RAB4A-201ENST00000366690 SCXQ7RTU7 201 aa12.33□□□□□ -0.44
RAB4A-201ENST00000366690 DIRC1Q969H9 104 aa12.33□□□□□ -0.44
RAB4A-201ENST00000366690 ZNF73O43830 326 aaPredicted RBP12.32□□□□□ -0.44
RAB4A-201ENST00000366690 GHRHP01286 108 aa12.32□□□□□ -0.44
RAB4A-201ENST00000366690 KRTAP10-11P60412 298 aa12.32□□□□□ -0.44
RAB4A-201ENST00000366690 SERP2Q8N6R1 65 aa12.32□□□□□ -0.44
RAB4A-201ENST00000366690 UPK3BQ9BT76 320 aa12.32□□□□□ -0.44
RAB4A-201ENST00000366690 DSCR8Q96T75 97 aa12.31□□□□□ -0.44
RAB4A-201ENST00000366690 COL6A5A8TX70 2615 aa12.3□□□□□ -0.44
RAB4A-201ENST00000366690 CRYGAP11844 174 aa12.3□□□□□ -0.44
RAB4A-201ENST00000366690 ESRGQ1W209 222 aa12.3□□□□□ -0.44
RAB4A-201ENST00000366690 IGKV2D-24A0A075B6R9 120 aa12.29□□□□□ -0.44
RAB4A-201ENST00000366690 COX7BP24311 80 aa12.28□□□□□ -0.44
RAB4A-201ENST00000366690 C15orf56Q8N910 161 aa12.28□□□□□ -0.44
RAB4A-201ENST00000366690 NBEAL1Q6ZS30 2694 aa12.27□□□□□ -0.45
RAB4A-201ENST00000366690 VPREB1P12018 145 aa12.27□□□□□ -0.45
RAB4A-201ENST00000366690 Q6ZVQ6 151 aa12.26□□□□□ -0.45
RAB4A-201ENST00000366690 GVQW2A0A096LPI5 108 aaPredicted RBP12.25□□□□□ -0.45
RAB4A-201ENST00000366690 LINC01547P58512 204 aaPredicted RBP12.25□□□□□ -0.45
RAB4A-201ENST00000366690 KRTAP26-1Q6PEX3 210 aa12.25□□□□□ -0.45
RAB4A-201ENST00000366690 Q6ZRP5 223 aa12.25□□□□□ -0.45
RAB4A-201ENST00000366690 MUC7Q8TAX7 377 aa12.24□□□□□ -0.45
RAB4A-201ENST00000366690 C1orf43Q9BWL3 253 aa12.23□□□□□ -0.45
RAB4A-201ENST00000366690 PRB2P02812 416 aaPredicted RBP12.23□□□□□ -0.45
RAB4A-201ENST00000366690 DEFB105AQ8NG35 78 aa12.22□□□□□ -0.45
RAB4A-201ENST00000366690 C20orf197Q8N268 126 aa12.22□□□□□ -0.45
RAB4A-201ENST00000366690 LOC110117498A0A087WWA1 95 aa12.21□□□□□ -0.45
RAB4A-201ENST00000366690 ELOF1P60002 83 aaKnown RBP12.21□□□□□ -0.45
RAB4A-201ENST00000366690 SVIPQ8NHG7 77 aa12.21□□□□□ -0.45
RAB4A-201ENST00000366690 ATP5EP2Q5VTU8 51 aa12.21□□□□□ -0.46
RAB4A-201ENST00000366690 TRAV10A0A0B4J240 114 aa12.2□□□□□ -0.46
RAB4A-201ENST00000366690 NDUFC2-KCTD14E9PQ53 114 aa12.2□□□□□ -0.46
RAB4A-201ENST00000366690 DEFB131BA0A096LNP1 70 aa12.19□□□□□ -0.46
RAB4A-201ENST00000366690 EGFEM1PQ0D2K5 195 aa12.19□□□□□ -0.46
RAB4A-201ENST00000366690 Q8N9L7 120 aa12.18□□□□□ -0.46
RAB4A-201ENST00000366690 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.18□□□□□ -0.46
RAB4A-201ENST00000366690 M0R378 163 aa12.17□□□□□ -0.46
RAB4A-201ENST00000366690 SERTAD4-AS1Q5TG53 156 aa12.17□□□□□ -0.46
RAB4A-201ENST00000366690 RPL37AP8A6NKH3 93 aa12.16□□□□□ -0.46
RAB4A-201ENST00000366690 CMYA5Q8N3K9 4069 aa12.15□□□□□ -0.46
RAB4A-201ENST00000366690 CASC10Q5T4H9 136 aa12.15□□□□□ -0.46
RAB4A-201ENST00000366690 CSMD3Q7Z407 3707 aa12.15□□□□□ -0.47
RAB4A-201ENST00000366690 C11orf45Q8TAV5 145 aa12.15□□□□□ -0.47
RAB4A-201ENST00000366690 FAM168BA1KXE4 195 aa12.14□□□□□ -0.47
RAB4A-201ENST00000366690 J3KT08 172 aa12.14□□□□□ -0.47
RAB4A-201ENST00000366690 SYCNQ0VAF6 134 aa12.14□□□□□ -0.47
RAB4A-201ENST00000366690 LINC00528Q8N1L1 170 aa12.14□□□□□ -0.47
RAB4A-201ENST00000366690 TRBV7-4A0A0J9YYF1 115 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms