RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 ATG2AQ2TAZ0 1938 aa11.55□□□□□ -0.56
NID1-202ENST00000366595 COA5Q86WW8 74 aa11.54□□□□□ -0.56
NID1-202ENST00000366595 KIAA1549LQ6ZVL6 1849 aa11.53□□□□□ -0.56
NID1-202ENST00000366595 BDP1A6H8Y1 2624 aa11.53□□□□□ -0.56
NID1-202ENST00000366595 IGLV8-61A0A075B6I0 122 aa11.53□□□□□ -0.56
NID1-202ENST00000366595 A8MUN3 132 aa11.53□□□□□ -0.56
NID1-202ENST00000366595 A8MWP4 228 aa11.52□□□□□ -0.56
NID1-202ENST00000366595 FHL3Q13643 280 aa11.52□□□□□ -0.57
NID1-202ENST00000366595 FAM19A4Q96LR4 140 aa11.52□□□□□ -0.57
NID1-202ENST00000366595 MRPL34Q9BQ48 92 aaKnown RBP11.49□□□□□ -0.57
NID1-202ENST00000366595 AGRNO00468 2067 aa11.49□□□□□ -0.57
NID1-202ENST00000366595 EPM2AB3EWF7 344 aa11.47□□□□□ -0.57
NID1-202ENST00000366595 Q6ZRP5 223 aa11.47□□□□□ -0.57
NID1-202ENST00000366595 GVQW2A0A096LPI5 108 aaPredicted RBP11.46□□□□□ -0.57
NID1-202ENST00000366595 MIR22HGQ0VDD5 57 aa11.46□□□□□ -0.57
NID1-202ENST00000366595 C16orf90A8MZG2 172 aa11.45□□□□□ -0.58
NID1-202ENST00000366595 MUC4Q99102 2169 aa11.45□□□□□ -0.58
NID1-202ENST00000366595 ABCA2Q9BZC7 2435 aa11.45□□□□□ -0.58
NID1-202ENST00000366595 CDSNQ15517 529 aa11.44□□□□□ -0.58
NID1-202ENST00000366595 LCA10Q71F78 164 aa11.44□□□□□ -0.58
NID1-202ENST00000366595 TYMSOSQ8TAI1 123 aa11.44□□□□□ -0.58
NID1-202ENST00000366595 KLKP1Q107X0 134 aa11.44□□□□□ -0.58
NID1-202ENST00000366595 MDFIQ99750 246 aa11.43□□□□□ -0.58
NID1-202ENST00000366595 RPL37AP61513 92 aaKnown RBP11.42□□□□□ -0.58
NID1-202ENST00000366595 KTN1-AS1Q86SY8 53 aa11.42□□□□□ -0.58
NID1-202ENST00000366595 Q96NJ1 140 aa11.41□□□□□ -0.58
NID1-202ENST00000366595 SMR3AQ99954 134 aa11.41□□□□□ -0.58
NID1-202ENST00000366595 ST20-AS1Q8NBB2 130 aa11.41□□□□□ -0.58
NID1-202ENST00000366595 PHF5AQ7RTV0 110 aaKnown RBP11.4□□□□□ -0.58
NID1-202ENST00000366595 CCDC168Q8NDH2 2452 aa11.4□□□□□ -0.58
NID1-202ENST00000366595 COL4A4P53420 1690 aaPredicted RBP11.4□□□□□ -0.58
NID1-202ENST00000366595 IGLV6-57P01721 117 aa11.39□□□□□ -0.59
NID1-202ENST00000366595 K7EQZ3 153 aa11.38□□□□□ -0.59
NID1-202ENST00000366595 KRTAP10-9P60411 292 aa11.38□□□□□ -0.59
NID1-202ENST00000366595 LTBP2Q14767 1821 aa11.37□□□□□ -0.59
NID1-202ENST00000366595 TTC28Q96AY4 2481 aa11.36□□□□□ -0.59
NID1-202ENST00000366595 MYO9AB2RTY4 2548 aa11.35□□□□□ -0.59
NID1-202ENST00000366595 LITAFQ99732 161 aa11.34□□□□□ -0.59
NID1-202ENST00000366595 APLNQ9ULZ1 77 aa11.34□□□□□ -0.59
NID1-202ENST00000366595 RTL8CO15255 209 aa11.34□□□□□ -0.59
NID1-202ENST00000366595 C10orf142B7Z368 130 aa11.32□□□□□ -0.6
NID1-202ENST00000366595 PRR15Q8IV56 129 aa11.31□□□□□ -0.6
NID1-202ENST00000366595 A0A1W2PPR1 153 aa11.3□□□□□ -0.6
NID1-202ENST00000366595 C8orf17Q9NRJ1 99 aa11.3□□□□□ -0.6
NID1-202ENST00000366595 EXPH5Q8NEV8 1989 aa11.3□□□□□ -0.6
NID1-202ENST00000366595 LINC00336Q6ZUF6 198 aa11.3□□□□□ -0.6
NID1-202ENST00000366595 NBDYA0A0U1RRE5 68 aa11.29□□□□□ -0.6
NID1-202ENST00000366595 KCNQ1DNQ9H478 68 aa11.29□□□□□ -0.6
NID1-202ENST00000366595 CDC42SE1Q9NRR8 79 aa11.27□□□□□ -0.6
NID1-202ENST00000366595 LINC00528Q8N1L1 170 aa11.26□□□□□ -0.61
NID1-202ENST00000366595 IGLV1-50A0A075B6I6 118 aa11.25□□□□□ -0.61
NID1-202ENST00000366595 PRO3102Q9H379 93 aa11.24□□□□□ -0.61
NID1-202ENST00000366595 A0A1B0GVX0 72 aa11.24□□□□□ -0.61
NID1-202ENST00000366595 H7BZZ5 65 aa11.24□□□□□ -0.61
NID1-202ENST00000366595 CHTF8P0CG12 524 aa11.24□□□□□ -0.61
NID1-202ENST00000366595 SPANXA2-OT1Q8N9U9 137 aa11.24□□□□□ -0.61
NID1-202ENST00000366595 LUZP6Q538Z0 58 aa11.23□□□□□ -0.61
NID1-202ENST00000366595 ADAMTS20P59510 1910 aa11.23□□□□□ -0.61
NID1-202ENST00000366595 RAI1Q7Z5J4 1906 aaPredicted RBP11.22□□□□□ -0.61
NID1-202ENST00000366595 IGFL1Q6UW32 110 aa11.22□□□□□ -0.61
NID1-202ENST00000366595 PTPRSQ13332 1948 aa11.22□□□□□ -0.61
NID1-202ENST00000366595 ZNF462Q96JM2 2506 aa11.22□□□□□ -0.61
NID1-202ENST00000366595 COL5A1P20908 1838 aaPredicted RBP11.22□□□□□ -0.61
NID1-202ENST00000366595 DNAH10OSP0CZ25 163 aa11.22□□□□□ -0.61
NID1-202ENST00000366595 C9orf129Q5T035 196 aaKnown RBP11.21□□□□□ -0.62
NID1-202ENST00000366595 SRCAPQ6ZRS2 3230 aa11.2□□□□□ -0.62
NID1-202ENST00000366595 LINC00588Q9Y4M8 146 aa11.2□□□□□ -0.62
NID1-202ENST00000366595 MUC22E2RYF6 1773 aaPredicted RBP11.19□□□□□ -0.62
NID1-202ENST00000366595 Q8NAQ8 132 aa11.18□□□□□ -0.62
NID1-202ENST00000366595 LRP4O75096 1905 aa11.17□□□□□ -0.62
NID1-202ENST00000366595 DSCR10P59022 87 aa11.16□□□□□ -0.62
NID1-202ENST00000366595 LINC01554Q52M75 96 aa11.16□□□□□ -0.62
NID1-202ENST00000366595 COX6B2Q6YFQ2 88 aa11.15□□□□□ -0.62
NID1-202ENST00000366595 CEP192Q8TEP8 1941 aa11.15□□□□□ -0.62
NID1-202ENST00000366595 KLK9Q2XQG4 91 aa11.14□□□□□ -0.63
NID1-202ENST00000366595 FAM104AQ969W3 186 aa11.13□□□□□ -0.63
NID1-202ENST00000366595 FAM168BA1KXE4 195 aa11.1□□□□□ -0.63
NID1-202ENST00000366595 LINC00304Q8N9R0 145 aa11.1□□□□□ -0.63
NID1-202ENST00000366595 PLA2G2DQ9UNK4 145 aa11.09□□□□□ -0.63
NID1-202ENST00000366595 CPAMD8Q8IZJ3 1885 aa11.09□□□□□ -0.63
NID1-202ENST00000366595 Q8N377 158 aa11.09□□□□□ -0.63
NID1-202ENST00000366595 ZNF861PO60384 105 aa11.08□□□□□ -0.64
NID1-202ENST00000366595 C15orf56Q8N910 161 aa11.07□□□□□ -0.64
NID1-202ENST00000366595 OBSCN-AS1Q96MR7 158 aa11.06□□□□□ -0.64
NID1-202ENST00000366595 Q1T7F1 81 aa11.05□□□□□ -0.64
NID1-202ENST00000366595 WIPF1O43516 503 aa11.04□□□□□ -0.64
NID1-202ENST00000366595 RBM12B-AS1Q9P1G2 102 aa11.04□□□□□ -0.64
NID1-202ENST00000366595 TLX1NBP0CAT3 122 aa11.04□□□□□ -0.64
NID1-202ENST00000366595 PRR34Q9NV39 138 aa11.04□□□□□ -0.64
NID1-202ENST00000366595 IGLV5-37A0A075B6J1 123 aa11.03□□□□□ -0.64
NID1-202ENST00000366595 F8P00451 2351 aa11.02□□□□□ -0.65
NID1-202ENST00000366595 J3QL48 77 aa11.01□□□□□ -0.65
NID1-202ENST00000366595 TET2Q6N021 2002 aaPredicted RBP11.01□□□□□ -0.65
NID1-202ENST00000366595 FN1P02751 2386 aaKnown RBP11□□□□□ -0.65
NID1-202ENST00000366595 JMJD1CQ15652 2540 aa10.98□□□□□ -0.65
NID1-202ENST00000366595 WWC2-AS2Q96NR7 200 aa10.97□□□□□ -0.65
NID1-202ENST00000366595 ABCA12Q86UK0 2595 aa10.96□□□□□ -0.65
NID1-202ENST00000366595 A0A0D9SG42 100 aa10.95□□□□□ -0.66
NID1-202ENST00000366595 EIF4EBP3O60516 100 aaPredicted RBP10.94□□□□□ -0.66
NID1-202ENST00000366595 LINC00483Q53H64 154 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms