RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 MUC2Q02817 5179 aa8.05□□□□□ -1.12
TNFRSF1A-202ENST00000366159 TRAV12-1A0A0B4J245 112 aa8.04□□□□□ -1.12
TNFRSF1A-202ENST00000366159 TMEM170BQ5T4T1 132 aa8.04□□□□□ -1.12
TNFRSF1A-202ENST00000366159 SFTA2Q6UW10 78 aa8.04□□□□□ -1.12
TNFRSF1A-202ENST00000366159 CHTOPQ9Y3Y2 248 aaKnown RBP8.04□□□□□ -1.12
TNFRSF1A-202ENST00000366159 IGKV2-28A0A075B6P5 120 aa8.03□□□□□ -1.12
TNFRSF1A-202ENST00000366159 TMEM223A0PJW6 202 aa8.03□□□□□ -1.12
TNFRSF1A-202ENST00000366159 IGKV2D-28P01615 120 aa8.03□□□□□ -1.12
TNFRSF1A-202ENST00000366159 KRTAP13-2Q52LG2 175 aa8.03□□□□□ -1.12
TNFRSF1A-202ENST00000366159 CRYGAP11844 174 aa8.03□□□□□ -1.12
TNFRSF1A-202ENST00000366159 IFI27L1Q96BM0 104 aa8.03□□□□□ -1.12
TNFRSF1A-202ENST00000366159 ANAPC11Q9NYG5 84 aa8.03□□□□□ -1.12
TNFRSF1A-202ENST00000366159 M0R378 163 aa8.02□□□□□ -1.13
TNFRSF1A-202ENST00000366159 UBE2AP49459 152 aa8.02□□□□□ -1.13
TNFRSF1A-202ENST00000366159 RPL24P83731 157 aaKnown RBP8.02□□□□□ -1.13
TNFRSF1A-202ENST00000366159 TMEM126AQ9H061 195 aa8.02□□□□□ -1.13
TNFRSF1A-202ENST00000366159 TMEM238C9JI98 176 aa8.01□□□□□ -1.13
TNFRSF1A-202ENST00000366159 FAM229BQ4G0N7 80 aa8.01□□□□□ -1.13
TNFRSF1A-202ENST00000366159 TYMSOSQ8TAI1 123 aa8□□□□□ -1.13
TNFRSF1A-202ENST00000366159 PRLHP81277 87 aa7.99□□□□□ -1.13
TNFRSF1A-202ENST00000366159 PRR4Q16378 134 aa7.99□□□□□ -1.13
TNFRSF1A-202ENST00000366159 CBLN2Q8IUK8 224 aa7.99□□□□□ -1.13
TNFRSF1A-202ENST00000366159 TSPAN13O95857 204 aa7.98□□□□□ -1.13
TNFRSF1A-202ENST00000366159 LINC00158P58513 81 aa7.98□□□□□ -1.13
TNFRSF1A-202ENST00000366159 FAM19A1Q7Z5A9 133 aa7.98□□□□□ -1.13
TNFRSF1A-202ENST00000366159 FAM19A2Q8N3H0 131 aa7.98□□□□□ -1.13
TNFRSF1A-202ENST00000366159 LINC00310P59036 64 aa7.97□□□□□ -1.13
TNFRSF1A-202ENST00000366159 PLEKHB2Q96CS7 222 aa7.97□□□□□ -1.13
TNFRSF1A-202ENST00000366159 TRGC2P03986 189 aa7.96□□□□□ -1.14
TNFRSF1A-202ENST00000366159 A0A0U1RRA0 63 aa7.95□□□□□ -1.14
TNFRSF1A-202ENST00000366159 HSBP1O75506 76 aa7.95□□□□□ -1.14
TNFRSF1A-202ENST00000366159 SMIM13P0DJ93 91 aa7.95□□□□□ -1.14
TNFRSF1A-202ENST00000366159 HERV-K104P63124 156 aa7.94□□□□□ -1.14
TNFRSF1A-202ENST00000366159 C21orf62-AS1Q17RA5 79 aa7.93□□□□□ -1.14
TNFRSF1A-202ENST00000366159 SPRR1AP35321 89 aa7.92□□□□□ -1.14
TNFRSF1A-202ENST00000366159 TSPEAR-AS2P59090 65 aa7.92□□□□□ -1.14
TNFRSF1A-202ENST00000366159 CTAG1AP78358 180 aa7.92□□□□□ -1.14
TNFRSF1A-202ENST00000366159 MIR7-3HGQ8N6C7 128 aa7.92□□□□□ -1.14
TNFRSF1A-202ENST00000366159 LINC00304Q8N9R0 145 aa7.92□□□□□ -1.14
TNFRSF1A-202ENST00000366159 NDUFA12Q9UI09 145 aa7.92□□□□□ -1.14
TNFRSF1A-202ENST00000366159 LOC107984156A0A0G2JMH3 177 aa7.91□□□□□ -1.14
TNFRSF1A-202ENST00000366159 KRTAP4-16G5E9R7 235 aaPredicted RBP7.91□□□□□ -1.14
TNFRSF1A-202ENST00000366159 SERF1AO75920 110 aa7.91□□□□□ -1.14
TNFRSF1A-202ENST00000366159 LEPROTL1O95214 131 aa7.91□□□□□ -1.14
TNFRSF1A-202ENST00000366159 ARL17AQ8IVW1 177 aa7.91□□□□□ -1.14
TNFRSF1A-202ENST00000366159 KCNQ1DNQ9H478 68 aa7.91□□□□□ -1.14
TNFRSF1A-202ENST00000366159 IGKV2D-26A0A0A0MRZ7 120 aa7.9□□□□□ -1.14
TNFRSF1A-202ENST00000366159 MYMXA0A1B0GTQ4 84 aa7.9□□□□□ -1.14
TNFRSF1A-202ENST00000366159 LINC00587B1AMM8 73 aa7.9□□□□□ -1.14
TNFRSF1A-202ENST00000366159 MEIG1Q5JSS6 88 aa7.9□□□□□ -1.14
TNFRSF1A-202ENST00000366159 BOD1L2Q8IYS8 172 aa7.9□□□□□ -1.14
TNFRSF1A-202ENST00000366159 COLCA2A8K830 154 aa7.89□□□□□ -1.15
TNFRSF1A-202ENST00000366159 PRYO14603 147 aa7.89□□□□□ -1.15
TNFRSF1A-202ENST00000366159 LEPROTO15243 131 aa7.89□□□□□ -1.15
TNFRSF1A-202ENST00000366159 C3orf22Q8N5N4 141 aa7.89□□□□□ -1.15
TNFRSF1A-202ENST00000366159 LINC00337Q8N6G1 96 aa7.89□□□□□ -1.15
TNFRSF1A-202ENST00000366159 SPRR4Q96PI1 79 aa7.89□□□□□ -1.15
TNFRSF1A-202ENST00000366159 H0Y8G0 127 aa7.88□□□□□ -1.15
TNFRSF1A-202ENST00000366159 ATP6V1G1O75348 118 aa7.88□□□□□ -1.15
TNFRSF1A-202ENST00000366159 PLNP26678 52 aa7.88□□□□□ -1.15
TNFRSF1A-202ENST00000366159 SLC7A5P1Q8MH63 180 aa7.88□□□□□ -1.15
TNFRSF1A-202ENST00000366159 HIGD2AQ9BW72 106 aa7.88□□□□□ -1.15
TNFRSF1A-202ENST00000366159 MUC17Q685J3 4493 aa7.88□□□□□ -1.15
TNFRSF1A-202ENST00000366159 H3BS24 57 aa7.87□□□□□ -1.15
TNFRSF1A-202ENST00000366159 NCR3O14931 201 aa7.87□□□□□ -1.15
TNFRSF1A-202ENST00000366159 RETNLBQ9BQ08 111 aa7.86□□□□□ -1.15
TNFRSF1A-202ENST00000366159 MAP1LC3CQ9BXW4 147 aa7.86□□□□□ -1.15
TNFRSF1A-202ENST00000366159 HSPB8Q9UJY1 196 aa7.86□□□□□ -1.15
TNFRSF1A-202ENST00000366159 TRBV10-3A0A0K0K1G6 114 aa7.85□□□□□ -1.15
TNFRSF1A-202ENST00000366159 J3QQQ9 107 aa7.85□□□□□ -1.15
TNFRSF1A-202ENST00000366159 FABP4P15090 132 aa7.85□□□□□ -1.15
TNFRSF1A-202ENST00000366159 SMCR5Q8TEV8 140 aa7.85□□□□□ -1.15
TNFRSF1A-202ENST00000366159 TRBV10-2A0A0K0K1G8 114 aa7.84□□□□□ -1.15
TNFRSF1A-202ENST00000366159 DPM2O94777 84 aa7.84□□□□□ -1.15
TNFRSF1A-202ENST00000366159 DAND5Q8N907 189 aa7.84□□□□□ -1.15
TNFRSF1A-202ENST00000366159 PMCHL2Q9BQD1 86 aa7.84□□□□□ -1.15
TNFRSF1A-202ENST00000366159 IGKCP01834 107 aa7.83□□□□□ -1.16
TNFRSF1A-202ENST00000366159 NMUP48645 174 aa7.83□□□□□ -1.16
TNFRSF1A-202ENST00000366159 ZNF706Q9Y5V0 76 aaPredicted RBP7.83□□□□□ -1.16
TNFRSF1A-202ENST00000366159 TPRXLQ17RH7 258 aa7.82□□□□□ -1.16
TNFRSF1A-202ENST00000366159 LINC00483Q53H64 154 aa7.82□□□□□ -1.16
TNFRSF1A-202ENST00000366159 SPAG11AQ6PDA7 123 aa7.82□□□□□ -1.16
TNFRSF1A-202ENST00000366159 ETDCA0A1B0GVM5 59 aa7.81□□□□□ -1.16
TNFRSF1A-202ENST00000366159 B5MCH6 92 aa7.81□□□□□ -1.16
TNFRSF1A-202ENST00000366159 FAT4Q6V0I7 4981 aa7.81□□□□□ -1.16
TNFRSF1A-202ENST00000366159 NDUFC2O95298 119 aa7.8□□□□□ -1.16
TNFRSF1A-202ENST00000366159 HERVK_113P61574 105 aa7.8□□□□□ -1.16
TNFRSF1A-202ENST00000366159 IGLV7-46A0A075B6I9 117 aa7.79□□□□□ -1.16
TNFRSF1A-202ENST00000366159 ERC2-IT1O76042 136 aa7.79□□□□□ -1.16
TNFRSF1A-202ENST00000366159 IGLV6-57P01721 117 aa7.79□□□□□ -1.16
TNFRSF1A-202ENST00000366159 DDTP30046 118 aa7.79□□□□□ -1.16
TNFRSF1A-202ENST00000366159 ADAMTSL4-AS1Q5T5F5 129 aa7.79□□□□□ -1.16
TNFRSF1A-202ENST00000366159 SOSTDC1Q6X4U4 206 aa7.79□□□□□ -1.16
TNFRSF1A-202ENST00000366159 SPANXB1Q9NS25 103 aaPredicted RBP7.79□□□□□ -1.16
TNFRSF1A-202ENST00000366159 A0A0J9YXY3 114 aa7.78□□□□□ -1.16
TNFRSF1A-202ENST00000366159 E9PLD3 99 aa7.78□□□□□ -1.16
TNFRSF1A-202ENST00000366159 LGALS3P17931 250 aaKnown RBP7.78□□□□□ -1.16
TNFRSF1A-202ENST00000366159 Q9BRP9 147 aa7.78□□□□□ -1.16
TNFRSF1A-202ENST00000366159 Q8NBF4 154 aa7.78□□□□□ -1.16
TNFRSF1A-202ENST00000366159 PPDPFQ9H3Y8 114 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms