RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 LINC00308Q8TCZ7 52 aa13.28□□□□□ -0.28
SHISA4-201ENST00000362011 SND1-IT1Q9HBX3 110 aa13.28□□□□□ -0.28
SHISA4-201ENST00000362011 GAGE2EQ4V326 116 aa13.27□□□□□ -0.29
SHISA4-201ENST00000362011 MUSTN1Q8IVN3 82 aa13.27□□□□□ -0.29
SHISA4-201ENST00000362011 GAGE2DQ9UEU5 116 aa13.27□□□□□ -0.29
SHISA4-201ENST00000362011 PTTG1IPP53801 180 aa13.26□□□□□ -0.29
SHISA4-201ENST00000362011 SOSTDC1Q6X4U4 206 aa13.26□□□□□ -0.29
SHISA4-201ENST00000362011 CEND1Q8N111 149 aa13.26□□□□□ -0.29
SHISA4-201ENST00000362011 PGPEP1Q9NXJ5 209 aa13.26□□□□□ -0.29
SHISA4-201ENST00000362011 KRTAP10-2P60368 255 aa13.25□□□□□ -0.29
SHISA4-201ENST00000362011 GAGE2BQ13066 116 aa13.25□□□□□ -0.29
SHISA4-201ENST00000362011 PPDPFQ9H3Y8 114 aa13.25□□□□□ -0.29
SHISA4-201ENST00000362011 LINC01620Q4KN68 170 aa13.24□□□□□ -0.29
SHISA4-201ENST00000362011 XAGE1AQ9HD64 81 aa13.24□□□□□ -0.29
SHISA4-201ENST00000362011 APOBP04114 4563 aaKnown RBP13.23□□□□□ -0.29
SHISA4-201ENST00000362011 LOC107984156A0A0G2JMH3 177 aa13.23□□□□□ -0.29
SHISA4-201ENST00000362011 RPL24P83731 157 aaKnown RBP13.23□□□□□ -0.29
SHISA4-201ENST00000362011 ARL17AQ8IVW1 177 aa13.23□□□□□ -0.29
SHISA4-201ENST00000362011 A0A096LNI7 61 aa13.22□□□□□ -0.29
SHISA4-201ENST00000362011 C16orf90A8MZG2 172 aa13.22□□□□□ -0.29
SHISA4-201ENST00000362011 EIF4EBP3O60516 100 aaPredicted RBP13.22□□□□□ -0.29
SHISA4-201ENST00000362011 SDIM1Q6ZPB5 146 aa13.22□□□□□ -0.29
SHISA4-201ENST00000362011 M0R143 59 aa13.21□□□□□ -0.29
SHISA4-201ENST00000362011 HINT1P49773 126 aaPredicted RBP13.2□□□□□ -0.3
SHISA4-201ENST00000362011 C9orf129Q5T035 196 aaKnown RBP13.2□□□□□ -0.3
SHISA4-201ENST00000362011 IGKV2-24A0A0C4DH68 120 aa13.19□□□□□ -0.3
SHISA4-201ENST00000362011 FXYD2P54710 66 aa13.19□□□□□ -0.3
SHISA4-201ENST00000362011 DNAH5Q8TE73 4624 aa13.19□□□□□ -0.3
SHISA4-201ENST00000362011 TMEM238LA0A1B0GVL6 79 aa13.18□□□□□ -0.3
SHISA4-201ENST00000362011 A6NJY4 79 aa13.18□□□□□ -0.3
SHISA4-201ENST00000362011 BVES-AS1Q5T3Y7 98 aa13.18□□□□□ -0.3
SHISA4-201ENST00000362011 A4D1N5 150 aa13.17□□□□□ -0.3
SHISA4-201ENST00000362011 NDUFC2O95298 119 aa13.16□□□□□ -0.3
SHISA4-201ENST00000362011 CHTF8P0CG12 524 aa13.16□□□□□ -0.3
SHISA4-201ENST00000362011 Q8N1X5 172 aa13.16□□□□□ -0.3
SHISA4-201ENST00000362011 LINC00474Q9P2X8 69 aa13.16□□□□□ -0.3
SHISA4-201ENST00000362011 PLA2G2DQ9UNK4 145 aa13.15□□□□□ -0.3
SHISA4-201ENST00000362011 VPREB1P12018 145 aa13.13□□□□□ -0.31
SHISA4-201ENST00000362011 BATFQ16520 125 aa13.13□□□□□ -0.31
SHISA4-201ENST00000362011 Q8NDZ9 215 aa13.13□□□□□ -0.31
SHISA4-201ENST00000362011 SPACA4Q8TDM5 124 aa13.12□□□□□ -0.31
SHISA4-201ENST00000362011 NHP2Q9NX24 153 aaKnown RBP13.12□□□□□ -0.31
SHISA4-201ENST00000362011 HERC1Q15751 4861 aa13.11□□□□□ -0.31
SHISA4-201ENST00000362011 FAM168BA1KXE4 195 aa13.11□□□□□ -0.31
SHISA4-201ENST00000362011 NCR3O14931 201 aa13.11□□□□□ -0.31
SHISA4-201ENST00000362011 SERTAD4-AS1Q5TG53 156 aa13.11□□□□□ -0.31
SHISA4-201ENST00000362011 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.11□□□□□ -0.31
SHISA4-201ENST00000362011 A6NDN8 102 aa13.1□□□□□ -0.31
SHISA4-201ENST00000362011 PANO1I0J062 215 aa13.1□□□□□ -0.31
SHISA4-201ENST00000362011 FAM19A5Q7Z5A7 132 aaPredicted RBP13.1□□□□□ -0.31
SHISA4-201ENST00000362011 IGLV5-37A0A075B6J1 123 aa13.09□□□□□ -0.31
SHISA4-201ENST00000362011 IGKV2-28A0A075B6P5 120 aa13.09□□□□□ -0.31
SHISA4-201ENST00000362011 A0A0B4J2C4 111 aa13.09□□□□□ -0.31
SHISA4-201ENST00000362011 IGKV2D-28P01615 120 aa13.09□□□□□ -0.31
SHISA4-201ENST00000362011 CFC1BP0CG36 223 aa13.09□□□□□ -0.31
SHISA4-201ENST00000362011 CFC1P0CG37 223 aa13.09□□□□□ -0.31
SHISA4-201ENST00000362011 NKAPP1Q8N9T2 125 aa13.09□□□□□ -0.31
SHISA4-201ENST00000362011 DPH3Q96FX2 82 aa13.09□□□□□ -0.31
SHISA4-201ENST00000362011 SNHG12Q9BXW3 62 aa13.09□□□□□ -0.31
SHISA4-201ENST00000362011 KRTAP10-1P60331 282 aa13.08□□□□□ -0.32
SHISA4-201ENST00000362011 PRR3P79522 188 aaKnown RBP13.08□□□□□ -0.32
SHISA4-201ENST00000362011 RAB37Q96AX2 223 aa13.08□□□□□ -0.32
SHISA4-201ENST00000362011 TRBV10-2A0A0K0K1G8 114 aa13.07□□□□□ -0.32
SHISA4-201ENST00000362011 A0A1W2PNN7 141 aa13.07□□□□□ -0.32
SHISA4-201ENST00000362011 TRAV13-2A0A0B4J235 113 aa13.06□□□□□ -0.32
SHISA4-201ENST00000362011 A0A1B0GWB2 263 aa13.06□□□□□ -0.32
SHISA4-201ENST00000362011 M0R378 163 aa13.06□□□□□ -0.32
SHISA4-201ENST00000362011 KRTAP7-1Q8IUC3 87 aa13.06□□□□□ -0.32
SHISA4-201ENST00000362011 LINC00337Q8N6G1 96 aa13.04□□□□□ -0.32
SHISA4-201ENST00000362011 OR13C6PQ8NH95 151 aa13.04□□□□□ -0.32
SHISA4-201ENST00000362011 C22orf24Q9Y442 160 aa13.04□□□□□ -0.32
SHISA4-201ENST00000362011 A0A087WYN8 130 aa13.03□□□□□ -0.32
SHISA4-201ENST00000362011 K7ERJ3 54 aa13.03□□□□□ -0.32
SHISA4-201ENST00000362011 M0QXV9 152 aa13.03□□□□□ -0.32
SHISA4-201ENST00000362011 PRO1854Q9UHT4 67 aa13.03□□□□□ -0.32
SHISA4-201ENST00000362011 S100A7L2Q5SY68 101 aa13.02□□□□□ -0.33
SHISA4-201ENST00000362011 Q6ZSA8 131 aa13.02□□□□□ -0.33
SHISA4-201ENST00000362011 FAM30AQ9NZY2 134 aa13.02□□□□□ -0.33
SHISA4-201ENST00000362011 RPL13AP40429 203 aaKnown RBP13.01□□□□□ -0.33
SHISA4-201ENST00000362011 MRPL55Q7Z7F7 128 aaKnown RBP13.01□□□□□ -0.33
SHISA4-201ENST00000362011 C7orf33Q8WU49 177 aa13.01□□□□□ -0.33
SHISA4-201ENST00000362011 EPM2AB3EWF7 344 aa13□□□□□ -0.33
SHISA4-201ENST00000362011 TMEM126AQ9H061 195 aa13□□□□□ -0.33
SHISA4-201ENST00000362011 PLAC8Q9NZF1 115 aa13□□□□□ -0.33
SHISA4-201ENST00000362011 LBHQ53QV2 105 aaPredicted RBP12.99□□□□□ -0.33
SHISA4-201ENST00000362011 GAGE10A6NGK3 116 aa12.98□□□□□ -0.33
SHISA4-201ENST00000362011 LINC00167Q96N53 147 aa12.98□□□□□ -0.33
SHISA4-201ENST00000362011 TRBV10-3A0A0K0K1G6 114 aa12.97□□□□□ -0.33
SHISA4-201ENST00000362011 IGLV6-57P01721 117 aa12.97□□□□□ -0.33
SHISA4-201ENST00000362011 PHF5AQ7RTV0 110 aaKnown RBP12.97□□□□□ -0.33
SHISA4-201ENST00000362011 DNAH8Q96JB1 4490 aa12.97□□□□□ -0.33
SHISA4-201ENST00000362011 COL5A1-AS1Q5SY13 56 aa12.96□□□□□ -0.33
SHISA4-201ENST00000362011 H7C2G1 150 aa12.95□□□□□ -0.34
SHISA4-201ENST00000362011 Q1RN00 199 aa12.95□□□□□ -0.34
SHISA4-201ENST00000362011 FAT1Q14517 4588 aa12.95□□□□□ -0.34
SHISA4-201ENST00000362011 CBY1Q9Y3M2 126 aa12.94□□□□□ -0.34
SHISA4-201ENST00000362011 RPL37AP8A6NKH3 93 aa12.93□□□□□ -0.34
SHISA4-201ENST00000362011 SCXQ7RTU7 201 aa12.93□□□□□ -0.34
SHISA4-201ENST00000362011 CIRBP-AS1Q8TBR5 109 aa12.93□□□□□ -0.34
SHISA4-201ENST00000362011 IGLV1-50A0A075B6I6 118 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms