RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 C11orf72Q8NBR9 251 aa6.45□□□□□ -1.38
TOP1-201ENST00000361337 VWFP04275 2813 aa6.44□□□□□ -1.38
TOP1-201ENST00000361337 SMIM26A0A096LP01 95 aa6.44□□□□□ -1.38
TOP1-201ENST00000361337 ZNF469Q96JG9 3925 aaPredicted RBP6.44□□□□□ -1.38
TOP1-201ENST00000361337 BEAN1Q3B7T3 259 aa6.44□□□□□ -1.38
TOP1-201ENST00000361337 MRPL55Q7Z7F7 128 aaKnown RBP6.44□□□□□ -1.38
TOP1-201ENST00000361337 IGLV5-45A0A087WSX0 123 aa6.43□□□□□ -1.38
TOP1-201ENST00000361337 SMIM1B2RUZ4 78 aa6.43□□□□□ -1.38
TOP1-201ENST00000361337 H0YGX0 51 aa6.43□□□□□ -1.38
TOP1-201ENST00000361337 KRTAP10-3P60369 221 aa6.43□□□□□ -1.38
TOP1-201ENST00000361337 C9orf129Q5T035 196 aaKnown RBP6.43□□□□□ -1.38
TOP1-201ENST00000361337 DNAH1Q9P2D7 4330 aa6.43□□□□□ -1.38
TOP1-201ENST00000361337 IGLV5-39A0A0G2JS06 123 aa6.43□□□□□ -1.38
TOP1-201ENST00000361337 NTM-AS1Q6ZSK4 140 aa6.42□□□□□ -1.38
TOP1-201ENST00000361337 CELA1Q9UNI1 258 aa6.42□□□□□ -1.38
TOP1-201ENST00000361337 RPL28P46779 137 aaKnown RBP6.42□□□□□ -1.38
TOP1-201ENST00000361337 APOC4P55056 127 aa6.42□□□□□ -1.38
TOP1-201ENST00000361337 CMC4P56277 68 aaPredicted RBP6.42□□□□□ -1.38
TOP1-201ENST00000361337 FAM222AQ5U5X8 452 aa6.42□□□□□ -1.38
TOP1-201ENST00000361337 LOC100131303A0A0U1RQF7 123 aa6.41□□□□□ -1.38
TOP1-201ENST00000361337 FUSP35637 526 aaKnown RBP eCLIP6.41□□□□□ -1.38
TOP1-201ENST00000361337 A8MTW9 85 aa6.41□□□□□ -1.38
TOP1-201ENST00000361337 IGHV4-30-4P0DP06 118 aa6.41□□□□□ -1.38
TOP1-201ENST00000361337 SERP1Q9Y6X1 66 aa6.41□□□□□ -1.38
TOP1-201ENST00000361337 IGLV1-51P01701 117 aa6.4□□□□□ -1.38
TOP1-201ENST00000361337 LINC01561Q8N1V8 128 aa6.4□□□□□ -1.38
TOP1-201ENST00000361337 Q8N9L7 120 aa6.4□□□□□ -1.38
TOP1-201ENST00000361337 TRBV7-6A0A0J9YX20 115 aa6.4□□□□□ -1.38
TOP1-201ENST00000361337 GYPEP15421 78 aa6.4□□□□□ -1.38
TOP1-201ENST00000361337 PMAIP1Q13794 54 aa6.4□□□□□ -1.38
TOP1-201ENST00000361337 Q6JHZ5 121 aa6.4□□□□□ -1.38
TOP1-201ENST00000361337 RPS28P62857 69 aaKnown RBP6.39□□□□□ -1.39
TOP1-201ENST00000361337 C6orf99Q4VX62 202 aa6.39□□□□□ -1.39
TOP1-201ENST00000361337 LINC00337Q8N6G1 96 aa6.39□□□□□ -1.39
TOP1-201ENST00000361337 JMJD7-PLA2G4BH0Y9G9 81 aa6.39□□□□□ -1.39
TOP1-201ENST00000361337 IGKV2-28A0A075B6P5 120 aa6.38□□□□□ -1.39
TOP1-201ENST00000361337 TRBV10-1A0A0K0K1A3 114 aa6.38□□□□□ -1.39
TOP1-201ENST00000361337 C3orf84H3BNL1 204 aa6.38□□□□□ -1.39
TOP1-201ENST00000361337 IGKV2D-28P01615 120 aa6.38□□□□□ -1.39
TOP1-201ENST00000361337 C1orf158Q8N1D5 194 aa6.38□□□□□ -1.39
TOP1-201ENST00000361337 C16orf95Q9H693 158 aa6.38□□□□□ -1.39
TOP1-201ENST00000361337 Q8N3U1 123 aa6.38□□□□□ -1.39
TOP1-201ENST00000361337 MIFP14174 115 aa6.37□□□□□ -1.39
TOP1-201ENST00000361337 NREPQ16612 68 aa6.37□□□□□ -1.39
TOP1-201ENST00000361337 CDC42SE2Q9NRR3 84 aa6.37□□□□□ -1.39
TOP1-201ENST00000361337 STAB2Q8WWQ8 2551 aa6.37□□□□□ -1.39
TOP1-201ENST00000361337 TMEM256-PLSCR3K7ERE1 68 aa6.36□□□□□ -1.39
TOP1-201ENST00000361337 CCL18P55774 89 aa6.36□□□□□ -1.39
TOP1-201ENST00000361337 ANGP03950 147 aaKnown RBP6.35□□□□□ -1.39
TOP1-201ENST00000361337 Q6ZQY7 126 aa6.35□□□□□ -1.39
TOP1-201ENST00000361337 OXTP01178 125 aa6.35□□□□□ -1.39
TOP1-201ENST00000361337 SPART-AS1P0CW21 52 aa6.35□□□□□ -1.39
TOP1-201ENST00000361337 C16orf74Q96GX8 76 aa6.35□□□□□ -1.39
TOP1-201ENST00000361337 TRAV10A0A0B4J240 114 aa6.34□□□□□ -1.39
TOP1-201ENST00000361337 FAM30AQ9NZY2 134 aa6.34□□□□□ -1.39
TOP1-201ENST00000361337 K7EQD1 137 aa6.34□□□□□ -1.39
TOP1-201ENST00000361337 DYNC2H1Q8NCM8 4307 aaKnown RBP6.34□□□□□ -1.39
TOP1-201ENST00000361337 A0A0J9YWU9 116 aa6.34□□□□□ -1.4
TOP1-201ENST00000361337 UBE2DNLQ8IWF7 75 aa6.34□□□□□ -1.4
TOP1-201ENST00000361337 LINC00269Q8N2A0 174 aa6.34□□□□□ -1.4
TOP1-201ENST00000361337 XAGE1AQ9HD64 81 aa6.34□□□□□ -1.4
TOP1-201ENST00000361337 TRAV7A0A075B6U4 112 aa6.33□□□□□ -1.4
TOP1-201ENST00000361337 FAM19A3Q7Z5A8 133 aa6.33□□□□□ -1.4
TOP1-201ENST00000361337 MDFIQ99750 246 aa6.33□□□□□ -1.4
TOP1-201ENST00000361337 CCKP06307 115 aa6.33□□□□□ -1.4
TOP1-201ENST00000361337 IGLV4-60A0A075B6I1 120 aa6.33□□□□□ -1.4
TOP1-201ENST00000361337 C9orf116Q5BN46 136 aaPredicted RBP6.33□□□□□ -1.4
TOP1-201ENST00000361337 CHKB-CPT1BH3BT56 60 aa6.32□□□□□ -1.4
TOP1-201ENST00000361337 TM2D3Q9BRN9 247 aa6.31□□□□□ -1.4
TOP1-201ENST00000361337 TRRAPQ9Y4A5 3859 aa6.31□□□□□ -1.4
TOP1-201ENST00000361337 BPY2O14599 106 aa6.3□□□□□ -1.4
TOP1-201ENST00000361337 KLK12Q9UKR0 248 aa6.3□□□□□ -1.4
TOP1-201ENST00000361337 C11orf45Q8TAV5 145 aa6.3□□□□□ -1.4
TOP1-201ENST00000361337 TMEM254Q8TBM7 123 aa6.29□□□□□ -1.4
TOP1-201ENST00000361337 GIG44P09565 113 aaPredicted RBP6.29□□□□□ -1.4
TOP1-201ENST00000361337 Q5XG85 94 aa6.29□□□□□ -1.4
TOP1-201ENST00000361337 PLAC8L1A1L4L8 177 aa6.28□□□□□ -1.4
TOP1-201ENST00000361337 A6NED7 52 aa6.28□□□□□ -1.4
TOP1-201ENST00000361337 HIGD2BQ4VC39 106 aa6.28□□□□□ -1.4
TOP1-201ENST00000361337 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.28□□□□□ -1.4
TOP1-201ENST00000361337 Q6ZTC4 211 aa6.28□□□□□ -1.4
TOP1-201ENST00000361337 HIGD2AQ9BW72 106 aa6.28□□□□□ -1.4
TOP1-201ENST00000361337 PRO0255Q9UI72 69 aa6.28□□□□□ -1.4
TOP1-201ENST00000361337 DEFB131BA0A096LNP1 70 aa6.28□□□□□ -1.4
TOP1-201ENST00000361337 IGHV3OR16-9A0A0B4J2B5 98 aa6.28□□□□□ -1.4
TOP1-201ENST00000361337 LINC01547P58512 204 aaPredicted RBP6.28□□□□□ -1.4
TOP1-201ENST00000361337 ATP5EP2Q5VTU8 51 aa6.28□□□□□ -1.4
TOP1-201ENST00000361337 PKD1L1Q8TDX9 2849 aa6.28□□□□□ -1.4
TOP1-201ENST00000361337 DEFB116Q30KQ4 102 aa6.27□□□□□ -1.41
TOP1-201ENST00000361337 Q6ZVQ6 151 aa6.27□□□□□ -1.41
TOP1-201ENST00000361337 IGKV2D-24A0A075B6R9 120 aa6.27□□□□□ -1.41
TOP1-201ENST00000361337 OBSCN-AS1Q96MR7 158 aa6.27□□□□□ -1.41
TOP1-201ENST00000361337 F8WDY8 70 aa6.26□□□□□ -1.41
TOP1-201ENST00000361337 ESRGQ1W209 222 aa6.26□□□□□ -1.41
TOP1-201ENST00000361337 WIPF1O43516 503 aa6.26□□□□□ -1.41
TOP1-201ENST00000361337 KRTAP10-11P60412 298 aa6.25□□□□□ -1.41
TOP1-201ENST00000361337 WFDC13Q8IUB5 93 aa6.25□□□□□ -1.41
TOP1-201ENST00000361337 Q8N814 137 aa6.25□□□□□ -1.41
TOP1-201ENST00000361337 PSCAO43653 123 aa6.25□□□□□ -1.41
TOP1-201ENST00000361337 PRYO14603 147 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms