RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 ASB16-AS1Q495Z4 193 aa11.94□□□□□ -0.5
CD47-202ENST00000361309 DAND5Q8N907 189 aa11.93□□□□□ -0.5
CD47-202ENST00000361309 LINC01547P58512 204 aaPredicted RBP11.92□□□□□ -0.5
CD47-202ENST00000361309 Q8NBF4 154 aa11.92□□□□□ -0.5
CD47-202ENST00000361309 ZNF706Q9Y5V0 76 aaPredicted RBP11.92□□□□□ -0.5
CD47-202ENST00000361309 KRTAP4-1Q9BYQ7 146 aa11.91□□□□□ -0.5
CD47-202ENST00000361309 A0A096LNJ9 63 aa11.9□□□□□ -0.5
CD47-202ENST00000361309 LINC00158P58513 81 aa11.89□□□□□ -0.51
CD47-202ENST00000361309 S100PP25815 95 aa11.88□□□□□ -0.51
CD47-202ENST00000361309 FABP9Q0Z7S8 132 aa11.88□□□□□ -0.51
CD47-202ENST00000361309 SFTA2Q6UW10 78 aa11.88□□□□□ -0.51
CD47-202ENST00000361309 C11orf86A6NJI1 115 aa11.87□□□□□ -0.51
CD47-202ENST00000361309 A0A0U1RRA0 63 aa11.86□□□□□ -0.51
CD47-202ENST00000361309 TMEM170BQ5T4T1 132 aa11.86□□□□□ -0.51
CD47-202ENST00000361309 SPINK1P00995 79 aa11.85□□□□□ -0.51
CD47-202ENST00000361309 SEC61BP60468 96 aaKnown RBP11.85□□□□□ -0.51
CD47-202ENST00000361309 COX19Q49B96 90 aa11.85□□□□□ -0.51
CD47-202ENST00000361309 SMCR5Q8TEV8 140 aa11.85□□□□□ -0.51
CD47-202ENST00000361309 PRYO14603 147 aa11.84□□□□□ -0.51
CD47-202ENST00000361309 URB1-AS1Q96HZ7 61 aa11.84□□□□□ -0.51
CD47-202ENST00000361309 KRTAP3-3Q9BYR6 98 aa11.84□□□□□ -0.51
CD47-202ENST00000361309 KRTAP3-2Q9BYR7 98 aa11.84□□□□□ -0.51
CD47-202ENST00000361309 BAGE3Q86Y29 109 aa11.83□□□□□ -0.52
CD47-202ENST00000361309 TMEM218A2RU14 115 aa11.82□□□□□ -0.52
CD47-202ENST00000361309 HBDP02042 147 aa11.82□□□□□ -0.52
CD47-202ENST00000361309 PMCHL1Q16048 86 aa11.82□□□□□ -0.52
CD47-202ENST00000361309 SPRR1AP35321 89 aa11.81□□□□□ -0.52
CD47-202ENST00000361309 NCR3O14931 201 aa11.8□□□□□ -0.52
CD47-202ENST00000361309 LINC00614P0C842 121 aa11.8□□□□□ -0.52
CD47-202ENST00000361309 CLLU1Q5K131 121 aa11.8□□□□□ -0.52
CD47-202ENST00000361309 FSIP2Q5CZC0 6907 aa11.79□□□□□ -0.52
CD47-202ENST00000361309 ETDCA0A1B0GVM5 59 aa11.79□□□□□ -0.52
CD47-202ENST00000361309 LINC00483Q53H64 154 aa11.79□□□□□ -0.52
CD47-202ENST00000361309 BOD1L2Q8IYS8 172 aa11.79□□□□□ -0.52
CD47-202ENST00000361309 KCNQ1DNQ9H478 68 aa11.79□□□□□ -0.52
CD47-202ENST00000361309 KRTAP4-16G5E9R7 235 aaPredicted RBP11.78□□□□□ -0.52
CD47-202ENST00000361309 SMIM13P0DJ93 91 aa11.78□□□□□ -0.52
CD47-202ENST00000361309 UQCC3Q6UW78 93 aa11.78□□□□□ -0.52
CD47-202ENST00000361309 C18orf32Q8TCD1 76 aa11.78□□□□□ -0.52
CD47-202ENST00000361309 NDUFA12Q9UI09 145 aa11.78□□□□□ -0.52
CD47-202ENST00000361309 ATP6V1G1O75348 118 aa11.77□□□□□ -0.53
CD47-202ENST00000361309 GAGE2AQ6NT46 116 aa11.77□□□□□ -0.53
CD47-202ENST00000361309 SEC11CQ9BY50 192 aa11.77□□□□□ -0.53
CD47-202ENST00000361309 MOBPQ13875 183 aa11.76□□□□□ -0.53
CD47-202ENST00000361309 Q8N377 158 aa11.76□□□□□ -0.53
CD47-202ENST00000361309 CRCT1Q9UGL9 99 aa11.76□□□□□ -0.53
CD47-202ENST00000361309 CHTOPQ9Y3Y2 248 aaKnown RBP11.76□□□□□ -0.53
CD47-202ENST00000361309 IGLV9-49A0A0B4J1Y8 123 aa11.75□□□□□ -0.53
CD47-202ENST00000361309 TMEM223A0PJW6 202 aa11.75□□□□□ -0.53
CD47-202ENST00000361309 TRBV10-3A0A0K0K1G6 114 aa11.74□□□□□ -0.53
CD47-202ENST00000361309 MEIG1Q5JSS6 88 aa11.74□□□□□ -0.53
CD47-202ENST00000361309 FAM19A2Q8N3H0 131 aa11.74□□□□□ -0.53
CD47-202ENST00000361309 MIR7-3HGQ8N6C7 128 aa11.74□□□□□ -0.53
CD47-202ENST00000361309 RPS29P62273 56 aaKnown RBP11.73□□□□□ -0.53
CD47-202ENST00000361309 SSBP3-AS1Q7Z2R9 100 aa11.72□□□□□ -0.53
CD47-202ENST00000361309 TRAPPC1Q9Y5R8 145 aa11.72□□□□□ -0.53
CD47-202ENST00000361309 ERC2-IT1O76042 136 aa11.71□□□□□ -0.53
CD47-202ENST00000361309 XP32Q5T750 250 aa11.71□□□□□ -0.53
CD47-202ENST00000361309 B5MCH6 92 aa11.7□□□□□ -0.54
CD47-202ENST00000361309 SLC25A20O43772 301 aa11.7□□□□□ -0.54
CD47-202ENST00000361309 RPS10P5Q9NQ39 176 aa11.69□□□□□ -0.54
CD47-202ENST00000361309 HERV-K104P63124 156 aa11.68□□□□□ -0.54
CD47-202ENST00000361309 S100A12P80511 92 aa11.68□□□□□ -0.54
CD47-202ENST00000361309 LCE2CQ5TA81 110 aa11.68□□□□□ -0.54
CD47-202ENST00000361309 TRAV12-1A0A0B4J245 112 aa11.66□□□□□ -0.54
CD47-202ENST00000361309 Q9BRP9 147 aa11.66□□□□□ -0.54
CD47-202ENST00000361309 RHEBQ15382 184 aa11.65□□□□□ -0.54
CD47-202ENST00000361309 LINC00587B1AMM8 73 aa11.64□□□□□ -0.55
CD47-202ENST00000361309 IFI27L1Q96BM0 104 aa11.64□□□□□ -0.55
CD47-202ENST00000361309 DDTP30046 118 aa11.63□□□□□ -0.55
CD47-202ENST00000361309 MAP1LC3CQ9BXW4 147 aa11.63□□□□□ -0.55
CD47-202ENST00000361309 C10orf91Q5T1B1 145 aa11.62□□□□□ -0.55
CD47-202ENST00000361309 Q6ZRX8 168 aa11.62□□□□□ -0.55
CD47-202ENST00000361309 MYMXA0A1B0GTQ4 84 aa11.61□□□□□ -0.55
CD47-202ENST00000361309 KRTAP19-2Q3LHN2 52 aa11.6□□□□□ -0.55
CD47-202ENST00000361309 C9orf153Q5TBE3 101 aa11.6□□□□□ -0.55
CD47-202ENST00000361309 TRBV10-2A0A0K0K1G8 114 aa11.59□□□□□ -0.55
CD47-202ENST00000361309 IFITM2Q01629 132 aa11.59□□□□□ -0.55
CD47-202ENST00000361309 COMMD7Q86VX2 200 aa11.59□□□□□ -0.55
CD47-202ENST00000361309 LOC107984156A0A0G2JMH3 177 aa11.58□□□□□ -0.56
CD47-202ENST00000361309 ARL17AQ8IVW1 177 aa11.58□□□□□ -0.56
CD47-202ENST00000361309 MT1HP80294 61 aa11.56□□□□□ -0.56
CD47-202ENST00000361309 CHCHD1Q96BP2 118 aaKnown RBP11.56□□□□□ -0.56
CD47-202ENST00000361309 TSPEAR-AS2P59090 65 aa11.55□□□□□ -0.56
CD47-202ENST00000361309 SPANXB1Q9NS25 103 aaPredicted RBP11.54□□□□□ -0.56
CD47-202ENST00000361309 PCOTHQ58A44 107 aa11.53□□□□□ -0.56
CD47-202ENST00000361309 S100A7L2Q5SY68 101 aa11.53□□□□□ -0.56
CD47-202ENST00000361309 IGLV6-57P01721 117 aa11.52□□□□□ -0.57
CD47-202ENST00000361309 JOSD1Q15040 202 aaPredicted RBP11.52□□□□□ -0.57
CD47-202ENST00000361309 ST20-AS1Q8NBB2 130 aa11.52□□□□□ -0.57
CD47-202ENST00000361309 IGLV8-61A0A075B6I0 122 aa11.51□□□□□ -0.57
CD47-202ENST00000361309 H0Y8G0 127 aa11.51□□□□□ -0.57
CD47-202ENST00000361309 LEPROTO15243 131 aa11.51□□□□□ -0.57
CD47-202ENST00000361309 MIEN1Q9BRT3 115 aa11.51□□□□□ -0.57
CD47-202ENST00000361309 TRAV23DV6A0A075B6W5 121 aa11.5□□□□□ -0.57
CD47-202ENST00000361309 CFC1BP0CG36 223 aa11.49□□□□□ -0.57
CD47-202ENST00000361309 C9orf92A6NGG3 77 aa11.48□□□□□ -0.57
CD47-202ENST00000361309 NDUFC2O95298 119 aa11.48□□□□□ -0.57
CD47-202ENST00000361309 ZNF73O43830 326 aaPredicted RBP11.47□□□□□ -0.57
CD47-202ENST00000361309 HRCT1Q6UXD1 115 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 168 ms