RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 TSPEAR-AS2P59090 65 aa12.36□□□□□ -0.43
CACNA1A-201ENST00000360228 CHCHD7Q9BUK0 85 aa12.35□□□□□ -0.43
CACNA1A-201ENST00000360228 Q6ZPA2 131 aa12.34□□□□□ -0.43
CACNA1A-201ENST00000360228 MOBPQ13875 183 aa12.34□□□□□ -0.43
CACNA1A-201ENST00000360228 A0A1W2PNU3 283 aaPredicted RBP12.32□□□□□ -0.44
CACNA1A-201ENST00000360228 TRAV22A0A0B4J277 110 aa12.31□□□□□ -0.44
CACNA1A-201ENST00000360228 LINC01554Q52M75 96 aa12.31□□□□□ -0.44
CACNA1A-201ENST00000360228 LINC01561Q8N1V8 128 aa12.31□□□□□ -0.44
CACNA1A-201ENST00000360228 MUC22E2RYF6 1773 aaPredicted RBP12.3□□□□□ -0.44
CACNA1A-201ENST00000360228 UQCR11O14957 56 aa12.3□□□□□ -0.44
CACNA1A-201ENST00000360228 ZNF580Q9UK33 172 aa12.3□□□□□ -0.44
CACNA1A-201ENST00000360228 KTN1-AS1Q86SY8 53 aa12.29□□□□□ -0.44
CACNA1A-201ENST00000360228 CDIP1Q9H305 208 aa12.29□□□□□ -0.44
CACNA1A-201ENST00000360228 IGLV1-40P01703 118 aa12.29□□□□□ -0.44
CACNA1A-201ENST00000360228 EDN2P20800 178 aa12.28□□□□□ -0.44
CACNA1A-201ENST00000360228 FHL2Q14192 279 aa12.28□□□□□ -0.44
CACNA1A-201ENST00000360228 KIAA0087Q14695 138 aa12.28□□□□□ -0.44
CACNA1A-201ENST00000360228 C11orf71Q6IPW1 123 aa12.27□□□□□ -0.44
CACNA1A-201ENST00000360228 CEP295Q9C0D2 2601 aa12.27□□□□□ -0.45
CACNA1A-201ENST00000360228 LINC00313P59037 77 aa12.27□□□□□ -0.45
CACNA1A-201ENST00000360228 SMCR5Q8TEV8 140 aa12.26□□□□□ -0.45
CACNA1A-201ENST00000360228 LINC01600Q96MT4 127 aa12.25□□□□□ -0.45
CACNA1A-201ENST00000360228 ERC2-IT1O76042 136 aa12.25□□□□□ -0.45
CACNA1A-201ENST00000360228 Q8N2B8 174 aa12.25□□□□□ -0.45
CACNA1A-201ENST00000360228 AMELXQ99217 191 aa12.23□□□□□ -0.45
CACNA1A-201ENST00000360228 A0A1B0GUV1 79 aa12.23□□□□□ -0.45
CACNA1A-201ENST00000360228 Q6ZRU5 148 aa12.23□□□□□ -0.45
CACNA1A-201ENST00000360228 C22orf24Q9Y442 160 aa12.23□□□□□ -0.45
CACNA1A-201ENST00000360228 SMR3AQ99954 134 aa12.22□□□□□ -0.45
CACNA1A-201ENST00000360228 COX8CQ7Z4L0 72 aa12.22□□□□□ -0.45
CACNA1A-201ENST00000360228 LCA10Q71F78 164 aa12.21□□□□□ -0.46
CACNA1A-201ENST00000360228 LYPD5Q6UWN5 251 aa12.2□□□□□ -0.46
CACNA1A-201ENST00000360228 SPATA3Q8NHX4 192 aa12.19□□□□□ -0.46
CACNA1A-201ENST00000360228 APLNQ9ULZ1 77 aa12.19□□□□□ -0.46
CACNA1A-201ENST00000360228 ODF3L2Q3SX64 289 aa12.19□□□□□ -0.46
CACNA1A-201ENST00000360228 AKAP13Q12802 2813 aa12.18□□□□□ -0.46
CACNA1A-201ENST00000360228 Q6ZSN1 163 aa12.17□□□□□ -0.46
CACNA1A-201ENST00000360228 NHLRC4P0CG21 123 aaPredicted RBP12.16□□□□□ -0.46
CACNA1A-201ENST00000360228 MIR22HGQ0VDD5 57 aa12.16□□□□□ -0.46
CACNA1A-201ENST00000360228 CHTF8P0CG12 524 aa12.15□□□□□ -0.46
CACNA1A-201ENST00000360228 ELOF1P60002 83 aaKnown RBP12.14□□□□□ -0.47
CACNA1A-201ENST00000360228 IGLV1-51P01701 117 aa12.14□□□□□ -0.47
CACNA1A-201ENST00000360228 Q96NJ1 140 aa12.13□□□□□ -0.47
CACNA1A-201ENST00000360228 CRIP3Q6Q6R5 217 aa12.13□□□□□ -0.47
CACNA1A-201ENST00000360228 LINC01546A6NGU7 62 aa12.13□□□□□ -0.47
CACNA1A-201ENST00000360228 TYMSOSQ8TAI1 123 aa12.12□□□□□ -0.47
CACNA1A-201ENST00000360228 URB1-AS1Q96HZ7 61 aa12.1□□□□□ -0.47
CACNA1A-201ENST00000360228 C11orf72Q8NBR9 251 aa12.1□□□□□ -0.47
CACNA1A-201ENST00000360228 LOC101927531A0A1B0GV80 90 aa12.09□□□□□ -0.47
CACNA1A-201ENST00000360228 CENPFP49454 3210 aa12.09□□□□□ -0.47
CACNA1A-201ENST00000360228 LINC00310P59036 64 aa12.08□□□□□ -0.47
CACNA1A-201ENST00000360228 COA5Q86WW8 74 aa12.08□□□□□ -0.47
CACNA1A-201ENST00000360228 TM2D3Q9BRN9 247 aa12.08□□□□□ -0.47
CACNA1A-201ENST00000360228 RPL37AP61513 92 aaKnown RBP12.08□□□□□ -0.48
CACNA1A-201ENST00000360228 FAM229AH3BQW9 127 aa12.07□□□□□ -0.48
CACNA1A-201ENST00000360228 EPM2AB3EWF7 344 aa12.06□□□□□ -0.48
CACNA1A-201ENST00000360228 LOC110117498A0A087WWA1 95 aa12.06□□□□□ -0.48
CACNA1A-201ENST00000360228 LINC00476Q8WZB0 136 aa12.05□□□□□ -0.48
CACNA1A-201ENST00000360228 FAM19A4Q96LR4 140 aa12.05□□□□□ -0.48
CACNA1A-201ENST00000360228 LINC00167Q96N53 147 aa12.05□□□□□ -0.48
CACNA1A-201ENST00000360228 A8MUN3 132 aa12.04□□□□□ -0.48
CACNA1A-201ENST00000360228 CDC42SE1Q9NRR8 79 aa12.03□□□□□ -0.48
CACNA1A-201ENST00000360228 C9orf129Q5T035 196 aaKnown RBP12.02□□□□□ -0.48
CACNA1A-201ENST00000360228 COX6B2Q6YFQ2 88 aa12.02□□□□□ -0.49
CACNA1A-201ENST00000360228 CSNK1G2-AS1Q8NCQ2 148 aa12.02□□□□□ -0.49
CACNA1A-201ENST00000360228 Q6ZQT0 140 aa12.01□□□□□ -0.49
CACNA1A-201ENST00000360228 FHL3Q13643 280 aa12□□□□□ -0.49
CACNA1A-201ENST00000360228 AVPP01185 164 aa12□□□□□ -0.49
CACNA1A-201ENST00000360228 Q8NBF4 154 aa12□□□□□ -0.49
CACNA1A-201ENST00000360228 PHF5AQ7RTV0 110 aaKnown RBP11.99□□□□□ -0.49
CACNA1A-201ENST00000360228 PRR15Q8IV56 129 aa11.99□□□□□ -0.49
CACNA1A-201ENST00000360228 HECTD1Q9ULT8 2610 aa11.96□□□□□ -0.49
CACNA1A-201ENST00000360228 Q6ZRX8 168 aa11.95□□□□□ -0.5
CACNA1A-201ENST00000360228 A0A096LNJ9 63 aa11.95□□□□□ -0.5
CACNA1A-201ENST00000360228 KIF25-AS1Q9Y6Z4 181 aa11.94□□□□□ -0.5
CACNA1A-201ENST00000360228 KLKP1Q107X0 134 aa11.94□□□□□ -0.5
CACNA1A-201ENST00000360228 LINC00336Q6ZUF6 198 aa11.94□□□□□ -0.5
CACNA1A-201ENST00000360228 FAM218AQ96MZ4 157 aa11.94□□□□□ -0.5
CACNA1A-201ENST00000360228 C16orf90A8MZG2 172 aa11.93□□□□□ -0.5
CACNA1A-201ENST00000360228 Q6ZRP5 223 aa11.93□□□□□ -0.5
CACNA1A-201ENST00000360228 IGLV6-57P01721 117 aa11.92□□□□□ -0.5
CACNA1A-201ENST00000360228 C16orf95Q9H693 158 aa11.92□□□□□ -0.5
CACNA1A-201ENST00000360228 PRO0461Q9UI25 63 aa11.91□□□□□ -0.5
CACNA1A-201ENST00000360228 A0A0A0MQY5 61 aa11.91□□□□□ -0.5
CACNA1A-201ENST00000360228 RTL8CO15255 209 aa11.91□□□□□ -0.5
CACNA1A-201ENST00000360228 A8MWP4 228 aa11.9□□□□□ -0.5
CACNA1A-201ENST00000360228 WIPF1O43516 503 aa11.9□□□□□ -0.5
CACNA1A-201ENST00000360228 J3QL48 77 aa11.9□□□□□ -0.5
CACNA1A-201ENST00000360228 CDSNQ15517 529 aa11.9□□□□□ -0.5
CACNA1A-201ENST00000360228 TRBV7-4A0A0J9YYF1 115 aa11.9□□□□□ -0.51
CACNA1A-201ENST00000360228 IGLV5-39A0A0G2JS06 123 aa11.89□□□□□ -0.51
CACNA1A-201ENST00000360228 H3BS24 57 aa11.89□□□□□ -0.51
CACNA1A-201ENST00000360228 ST20-AS1Q8NBB2 130 aa11.88□□□□□ -0.51
CACNA1A-201ENST00000360228 IGHV3OR16-9A0A0B4J2B5 98 aa11.87□□□□□ -0.51
CACNA1A-201ENST00000360228 PRO3102Q9H379 93 aa11.87□□□□□ -0.51
CACNA1A-201ENST00000360228 K7EQZ3 153 aa11.86□□□□□ -0.51
CACNA1A-201ENST00000360228 CENPEQ02224 2701 aa11.86□□□□□ -0.51
CACNA1A-201ENST00000360228 LINC00483Q53H64 154 aa11.84□□□□□ -0.51
CACNA1A-201ENST00000360228 MAST4O15021 2626 aa11.84□□□□□ -0.51
CACNA1A-201ENST00000360228 SMCPP49901 116 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms