RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 SDIM1Q6ZPB5 146 aa9.5□□□□□ -0.89
CSNK1E-201ENST00000359867 COX7A2LO14548 114 aa9.49□□□□□ -0.89
CSNK1E-201ENST00000359867 MALP21145 153 aa9.49□□□□□ -0.89
CSNK1E-201ENST00000359867 H3BNG1 76 aa9.49□□□□□ -0.89
CSNK1E-201ENST00000359867 CXCL5P42830 114 aa9.49□□□□□ -0.89
CSNK1E-201ENST00000359867 SS18Q15532 418 aa9.49□□□□□ -0.89
CSNK1E-201ENST00000359867 FAM218AQ96MZ4 157 aa9.49□□□□□ -0.89
CSNK1E-201ENST00000359867 PRO0628Q9UI54 55 aa9.48□□□□□ -0.89
CSNK1E-201ENST00000359867 A0A087WZ39 114 aa9.48□□□□□ -0.89
CSNK1E-201ENST00000359867 LELP1Q5T871 98 aa9.48□□□□□ -0.89
CSNK1E-201ENST00000359867 TOMM7Q9P0U1 55 aa9.47□□□□□ -0.89
CSNK1E-201ENST00000359867 DEFB131BA0A096LNP1 70 aa9.47□□□□□ -0.89
CSNK1E-201ENST00000359867 Q9HAA7 133 aa9.47□□□□□ -0.89
CSNK1E-201ENST00000359867 PFN2P35080 140 aa9.46□□□□□ -0.89
CSNK1E-201ENST00000359867 LINC01561Q8N1V8 128 aa9.46□□□□□ -0.89
CSNK1E-201ENST00000359867 COX7B2Q8TF08 81 aa9.46□□□□□ -0.89
CSNK1E-201ENST00000359867 A0A087WVE0 104 aa9.46□□□□□ -0.9
CSNK1E-201ENST00000359867 RPL18AQ02543 176 aaKnown RBP9.46□□□□□ -0.9
CSNK1E-201ENST00000359867 COPS9Q8WXC6 57 aa9.45□□□□□ -0.9
CSNK1E-201ENST00000359867 BAALC-AS2P0C853 105 aa9.45□□□□□ -0.9
CSNK1E-201ENST00000359867 SERP2Q8N6R1 65 aa9.44□□□□□ -0.9
CSNK1E-201ENST00000359867 CSMD3Q7Z407 3707 aa9.44□□□□□ -0.9
CSNK1E-201ENST00000359867 IGKV3D-7A0A0C4DH55 119 aa9.43□□□□□ -0.9
CSNK1E-201ENST00000359867 SEC61GP60059 68 aa9.43□□□□□ -0.9
CSNK1E-201ENST00000359867 TRAV10A0A0B4J240 114 aa9.43□□□□□ -0.9
CSNK1E-201ENST00000359867 LINC00269Q8N2A0 174 aa9.43□□□□□ -0.9
CSNK1E-201ENST00000359867 C22orf24Q9Y442 160 aa9.43□□□□□ -0.9
CSNK1E-201ENST00000359867 ANGP03950 147 aaKnown RBP9.42□□□□□ -0.9
CSNK1E-201ENST00000359867 LYPD5Q6UWN5 251 aa9.42□□□□□ -0.9
CSNK1E-201ENST00000359867 MIR7-3HGQ8N6C7 128 aa9.42□□□□□ -0.9
CSNK1E-201ENST00000359867 LINC00337Q8N6G1 96 aa9.42□□□□□ -0.9
CSNK1E-201ENST00000359867 XCL1P47992 114 aa9.41□□□□□ -0.9
CSNK1E-201ENST00000359867 REG3AQ06141 175 aa9.41□□□□□ -0.9
CSNK1E-201ENST00000359867 CD164L2Q6UWJ8 174 aa9.41□□□□□ -0.9
CSNK1E-201ENST00000359867 DNAH7Q8WXX0 4024 aa9.41□□□□□ -0.9
CSNK1E-201ENST00000359867 CLPSL2Q6UWE3 100 aa9.4□□□□□ -0.9
CSNK1E-201ENST00000359867 CRPP02741 224 aa9.39□□□□□ -0.91
CSNK1E-201ENST00000359867 LINC00158P58513 81 aa9.39□□□□□ -0.91
CSNK1E-201ENST00000359867 IGKV2-28A0A075B6P5 120 aa9.39□□□□□ -0.91
CSNK1E-201ENST00000359867 IGKV2D-28P01615 120 aa9.39□□□□□ -0.91
CSNK1E-201ENST00000359867 Q8IZM0 81 aa9.39□□□□□ -0.91
CSNK1E-201ENST00000359867 SND1-IT1Q9HBX3 110 aa9.39□□□□□ -0.91
CSNK1E-201ENST00000359867 FAM236DA0A1B0GTK5 79 aa9.38□□□□□ -0.91
CSNK1E-201ENST00000359867 FAM236CP0DP71 79 aa9.38□□□□□ -0.91
CSNK1E-201ENST00000359867 C9orf129Q5T035 196 aaKnown RBP9.38□□□□□ -0.91
CSNK1E-201ENST00000359867 CHCHD10Q8WYQ3 142 aaPredicted RBP9.38□□□□□ -0.91
CSNK1E-201ENST00000359867 A0A087WYN8 130 aa9.38□□□□□ -0.91
CSNK1E-201ENST00000359867 PRR34Q9NV39 138 aa9.38□□□□□ -0.91
CSNK1E-201ENST00000359867 IBA57-AS1B1ANH7 110 aa9.37□□□□□ -0.91
CSNK1E-201ENST00000359867 C6orf226Q5I0X4 101 aa9.37□□□□□ -0.91
CSNK1E-201ENST00000359867 Q8N3U1 123 aa9.37□□□□□ -0.91
CSNK1E-201ENST00000359867 TENM2Q9NT68 2774 aa9.37□□□□□ -0.91
CSNK1E-201ENST00000359867 USP17L23D6RBM5 183 aa9.37□□□□□ -0.91
CSNK1E-201ENST00000359867 SMIM11BQ8TCY0 68 aa9.36□□□□□ -0.91
CSNK1E-201ENST00000359867 TRAV13-2A0A0B4J235 113 aa9.35□□□□□ -0.91
CSNK1E-201ENST00000359867 CCL18P55774 89 aa9.35□□□□□ -0.91
CSNK1E-201ENST00000359867 LYSTQ99698 3801 aa9.35□□□□□ -0.91
CSNK1E-201ENST00000359867 STARD9Q9P2P6 4700 aa9.35□□□□□ -0.91
CSNK1E-201ENST00000359867 A0A0U1RQV1 116 aa9.35□□□□□ -0.91
CSNK1E-201ENST00000359867 RPL28P46779 137 aaKnown RBP9.35□□□□□ -0.91
CSNK1E-201ENST00000359867 C14orf132Q9NPU4 83 aa9.35□□□□□ -0.91
CSNK1E-201ENST00000359867 KLK12Q9UKR0 248 aa9.34□□□□□ -0.91
CSNK1E-201ENST00000359867 IGLV10-54A0A075B6I4 117 aa9.34□□□□□ -0.91
CSNK1E-201ENST00000359867 SLPIP03973 132 aa9.34□□□□□ -0.91
CSNK1E-201ENST00000359867 DNAL4O96015 105 aa9.33□□□□□ -0.92
CSNK1E-201ENST00000359867 DYNC2H1Q8NCM8 4307 aaKnown RBP9.33□□□□□ -0.92
CSNK1E-201ENST00000359867 KIAA0087Q14695 138 aa9.33□□□□□ -0.92
CSNK1E-201ENST00000359867 ENHOQ6UWT2 76 aa9.33□□□□□ -0.92
CSNK1E-201ENST00000359867 V9GYY9 64 aa9.32□□□□□ -0.92
CSNK1E-201ENST00000359867 LECT2O14960 151 aa9.32□□□□□ -0.92
CSNK1E-201ENST00000359867 ESRGQ1W209 222 aa9.32□□□□□ -0.92
CSNK1E-201ENST00000359867 LINC00846Q9NV44 126 aa9.32□□□□□ -0.92
CSNK1E-201ENST00000359867 NUPR2A6NF83 97 aa9.31□□□□□ -0.92
CSNK1E-201ENST00000359867 PLECQ15149 4684 aaKnown RBP9.31□□□□□ -0.92
CSNK1E-201ENST00000359867 EPM2AB3EWF7 344 aa9.31□□□□□ -0.92
CSNK1E-201ENST00000359867 MUC7Q8TAX7 377 aa9.31□□□□□ -0.92
CSNK1E-201ENST00000359867 INAFM2P0DMQ5 153 aa9.3□□□□□ -0.92
CSNK1E-201ENST00000359867 FP248Q71RG6 208 aaPredicted RBP9.3□□□□□ -0.92
CSNK1E-201ENST00000359867 WFDC10BQ8IUB3 73 aa9.3□□□□□ -0.92
CSNK1E-201ENST00000359867 WWC2-AS2Q96NR7 200 aa9.3□□□□□ -0.92
CSNK1E-201ENST00000359867 NCR3O14931 201 aa9.3□□□□□ -0.92
CSNK1E-201ENST00000359867 COX17Q14061 63 aa9.29□□□□□ -0.92
CSNK1E-201ENST00000359867 Q6JHZ5 121 aa9.29□□□□□ -0.92
CSNK1E-201ENST00000359867 C20orf197Q8N268 126 aa9.29□□□□□ -0.92
CSNK1E-201ENST00000359867 APLNQ9ULZ1 77 aa9.29□□□□□ -0.92
CSNK1E-201ENST00000359867 C1orf195Q5TG92 126 aa9.28□□□□□ -0.92
CSNK1E-201ENST00000359867 PRR3P79522 188 aaKnown RBP9.27□□□□□ -0.93
CSNK1E-201ENST00000359867 NDUFC2O95298 119 aa9.27□□□□□ -0.93
CSNK1E-201ENST00000359867 GHRHP01286 108 aa9.27□□□□□ -0.93
CSNK1E-201ENST00000359867 LINC01556Q5JQF7 62 aa9.27□□□□□ -0.93
CSNK1E-201ENST00000359867 BRK1Q8WUW1 75 aa9.26□□□□□ -0.93
CSNK1E-201ENST00000359867 LINC00588Q9Y4M8 146 aa9.26□□□□□ -0.93
CSNK1E-201ENST00000359867 SERP1Q9Y6X1 66 aa9.26□□□□□ -0.93
CSNK1E-201ENST00000359867 TRAV23DV6A0A075B6W5 121 aa9.25□□□□□ -0.93
CSNK1E-201ENST00000359867 NDUFC2-KCTD14E9PQ53 114 aa9.25□□□□□ -0.93
CSNK1E-201ENST00000359867 SPAG11BQ08648 103 aa9.25□□□□□ -0.93
CSNK1E-201ENST00000359867 LINC00474Q9P2X8 69 aa9.25□□□□□ -0.93
CSNK1E-201ENST00000359867 H0YGX0 51 aa9.24□□□□□ -0.93
CSNK1E-201ENST00000359867 H7BZZ5 65 aa9.23□□□□□ -0.93
CSNK1E-201ENST00000359867 KRTAP26-1Q6PEX3 210 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms