RNA–Protein interactions for RNA: ENST00000358994.8

PTPA-206, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPA, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-206ENST00000358994 UNC79Q9P2D8 2635 aa12.36□□□□□ -0.43
PTPA-206ENST00000358994 C9orf66Q5T8R8 295 aa12.36□□□□□ -0.43
PTPA-206ENST00000358994 NDUFC1O43677 76 aa12.35□□□□□ -0.43
PTPA-206ENST00000358994 Q6ZQY7 126 aa12.35□□□□□ -0.43
PTPA-206ENST00000358994 APCP25054 2843 aa12.35□□□□□ -0.43
PTPA-206ENST00000358994 A0A1B0GUV1 79 aa12.34□□□□□ -0.43
PTPA-206ENST00000358994 FSHBP01225 129 aa12.34□□□□□ -0.43
PTPA-206ENST00000358994 LINC00269Q8N2A0 174 aa12.34□□□□□ -0.43
PTPA-206ENST00000358994 MIFP14174 115 aa12.34□□□□□ -0.43
PTPA-206ENST00000358994 MUC7Q8TAX7 377 aa12.34□□□□□ -0.43
PTPA-206ENST00000358994 IGHV4-28A0A0C4DH34 117 aa12.33□□□□□ -0.44
PTPA-206ENST00000358994 NIPBLQ6KC79 2804 aaeCLIP12.32□□□□□ -0.44
PTPA-206ENST00000358994 PDE6GP18545 87 aa12.32□□□□□ -0.44
PTPA-206ENST00000358994 CSNK1G2-AS1Q8NCQ2 148 aa12.32□□□□□ -0.44
PTPA-206ENST00000358994 NAV2Q8IVL1 2488 aa12.32□□□□□ -0.44
PTPA-206ENST00000358994 TEX15Q9BXT5 2789 aa12.32□□□□□ -0.44
PTPA-206ENST00000358994 NREPQ16612 68 aa12.31□□□□□ -0.44
PTPA-206ENST00000358994 ATP5EP56381 51 aaPredicted RBP12.3□□□□□ -0.44
PTPA-206ENST00000358994 DSCR9P59020 149 aa12.3□□□□□ -0.44
PTPA-206ENST00000358994 ZNF469Q96JG9 3925 aaPredicted RBP12.3□□□□□ -0.44
PTPA-206ENST00000358994 GYPEP15421 78 aa12.3□□□□□ -0.44
PTPA-206ENST00000358994 ANKRD17O75179 2603 aaKnown RBP12.3□□□□□ -0.44
PTPA-206ENST00000358994 FAM229BQ4G0N7 80 aa12.29□□□□□ -0.44
PTPA-206ENST00000358994 CD164L2Q6UWJ8 174 aa12.29□□□□□ -0.44
PTPA-206ENST00000358994 BRK1Q8WUW1 75 aa12.29□□□□□ -0.44
PTPA-206ENST00000358994 IGLV10-54A0A075B6I4 117 aa12.29□□□□□ -0.44
PTPA-206ENST00000358994 DEFB130BP0DP73 79 aa12.29□□□□□ -0.44
PTPA-206ENST00000358994 DEFB130AP0DP74 79 aa12.29□□□□□ -0.44
PTPA-206ENST00000358994 TMEM254Q8TBM7 123 aa12.29□□□□□ -0.44
PTPA-206ENST00000358994 A0A096LPF7 62 aa12.28□□□□□ -0.44
PTPA-206ENST00000358994 IGLV6-57P01721 117 aa12.28□□□□□ -0.44
PTPA-206ENST00000358994 CHCHD10Q8WYQ3 142 aaPredicted RBP12.28□□□□□ -0.44
PTPA-206ENST00000358994 FN1P02751 2386 aaKnown RBP12.27□□□□□ -0.45
PTPA-206ENST00000358994 C10orf25Q5T742 122 aa12.27□□□□□ -0.45
PTPA-206ENST00000358994 BPY2O14599 106 aa12.26□□□□□ -0.45
PTPA-206ENST00000358994 LINC01006Q8NI28 216 aa12.26□□□□□ -0.45
PTPA-206ENST00000358994 CCL24O00175 119 aa12.25□□□□□ -0.45
PTPA-206ENST00000358994 UNQ6190/PRO20217Q6UXQ8 127 aa12.24□□□□□ -0.45
PTPA-206ENST00000358994 C19orf73Q9NVV2 129 aa12.24□□□□□ -0.45
PTPA-206ENST00000358994 A0A0U1RQV1 116 aa12.24□□□□□ -0.45
PTPA-206ENST00000358994 MPLKIPQ8TAP9 179 aa12.24□□□□□ -0.45
PTPA-206ENST00000358994 F8WDY8 70 aa12.23□□□□□ -0.45
PTPA-206ENST00000358994 H3BQ85 93 aa12.22□□□□□ -0.45
PTPA-206ENST00000358994 Q8N9L7 120 aa12.22□□□□□ -0.45
PTPA-206ENST00000358994 ERC2-IT1O76042 136 aa12.22□□□□□ -0.45
PTPA-206ENST00000358994 IGHV4-31P0DP07 118 aa12.22□□□□□ -0.45
PTPA-206ENST00000358994 MAST4O15021 2626 aa12.21□□□□□ -0.45
PTPA-206ENST00000358994 NF1P21359 2839 aa12.2□□□□□ -0.46
PTPA-206ENST00000358994 REG3AQ06141 175 aa12.2□□□□□ -0.46
PTPA-206ENST00000358994 ANGP03950 147 aaKnown RBP12.19□□□□□ -0.46
PTPA-206ENST00000358994 KRTAP10-9P60411 292 aa12.19□□□□□ -0.46
PTPA-206ENST00000358994 CMC4P56277 68 aaPredicted RBP12.19□□□□□ -0.46
PTPA-206ENST00000358994 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.19□□□□□ -0.46
PTPA-206ENST00000358994 DIRC1Q969H9 104 aa12.18□□□□□ -0.46
PTPA-206ENST00000358994 SETD2Q9BYW2 2564 aaPredicted RBP12.18□□□□□ -0.46
PTPA-206ENST00000358994 ACANP16112 2415 aa12.18□□□□□ -0.46
PTPA-206ENST00000358994 PRYO14603 147 aa12.17□□□□□ -0.46
PTPA-206ENST00000358994 C1orf195Q5TG92 126 aa12.17□□□□□ -0.46
PTPA-206ENST00000358994 OCR1Q9BZK8 76 aa12.17□□□□□ -0.46
PTPA-206ENST00000358994 CYSRT1A8MQ03 144 aa12.17□□□□□ -0.46
PTPA-206ENST00000358994 IGKV4-1P06312 121 aa12.17□□□□□ -0.46
PTPA-206ENST00000358994 SPAG11BQ08648 103 aa12.17□□□□□ -0.46
PTPA-206ENST00000358994 LINC00612Q8N6U2 182 aa12.17□□□□□ -0.46
PTPA-206ENST00000358994 A0A0J9YWU9 116 aa12.15□□□□□ -0.46
PTPA-206ENST00000358994 IGHV4-30-4P0DP06 118 aa12.15□□□□□ -0.46
PTPA-206ENST00000358994 Q6ZTC4 211 aa12.15□□□□□ -0.46
PTPA-206ENST00000358994 PRO0255Q9UI72 69 aa12.15□□□□□ -0.46
PTPA-206ENST00000358994 COX7BP24311 80 aa12.15□□□□□ -0.46
PTPA-206ENST00000358994 ESRGQ1W209 222 aa12.14□□□□□ -0.47
PTPA-206ENST00000358994 NBEAL2Q6ZNJ1 2754 aa12.14□□□□□ -0.47
PTPA-206ENST00000358994 TEP1Q99973 2627 aaKnown RBP12.14□□□□□ -0.47
PTPA-206ENST00000358994 ZNF73O43830 326 aaPredicted RBP12.14□□□□□ -0.47
PTPA-206ENST00000358994 FUSP35637 526 aaKnown RBP eCLIP12.14□□□□□ -0.47
PTPA-206ENST00000358994 XAGE1AQ9HD64 81 aa12.13□□□□□ -0.47
PTPA-206ENST00000358994 PDZD2O15018 2839 aa12.13□□□□□ -0.47
PTPA-206ENST00000358994 SONP18583 2426 aaKnown RBP12.13□□□□□ -0.47
PTPA-206ENST00000358994 ELOF1P60002 83 aaKnown RBP12.13□□□□□ -0.47
PTPA-206ENST00000358994 IGLV1-51P01701 117 aa12.12□□□□□ -0.47
PTPA-206ENST00000358994 HIGD2AQ9BW72 106 aa12.12□□□□□ -0.47
PTPA-206ENST00000358994 OTOGQ6ZRI0 2925 aa12.11□□□□□ -0.47
PTPA-206ENST00000358994 ITPR3Q14573 2671 aa12.11□□□□□ -0.47
PTPA-206ENST00000358994 MTORP42345 2549 aa12.11□□□□□ -0.47
PTPA-206ENST00000358994 V9GYY9 64 aa12.1□□□□□ -0.47
PTPA-206ENST00000358994 DAD1P61803 113 aa12.08□□□□□ -0.48
PTPA-206ENST00000358994 ESM1Q9NQ30 184 aa12.07□□□□□ -0.48
PTPA-206ENST00000358994 C6orf48Q9UBA6 75 aa12.07□□□□□ -0.48
PTPA-206ENST00000358994 X6R8D5 127 aa12.05□□□□□ -0.48
PTPA-206ENST00000358994 FLNAP21333 2647 aaKnown RBP12.05□□□□□ -0.48
PTPA-206ENST00000358994 GVQW2A0A096LPI5 108 aaPredicted RBP12.04□□□□□ -0.48
PTPA-206ENST00000358994 SEC61GP60059 68 aa12.04□□□□□ -0.48
PTPA-206ENST00000358994 CELA1Q9UNI1 258 aa12.04□□□□□ -0.48
PTPA-206ENST00000358994 DNAJC9-AS1A6NH13 148 aa12.04□□□□□ -0.48
PTPA-206ENST00000358994 KLK12Q9UKR0 248 aa12.04□□□□□ -0.48
PTPA-206ENST00000358994 C3orf84H3BNL1 204 aa12.03□□□□□ -0.48
PTPA-206ENST00000358994 LINC00528Q8N1L1 170 aa12.02□□□□□ -0.49
PTPA-206ENST00000358994 VPREB1P12018 145 aa12.01□□□□□ -0.49
PTPA-206ENST00000358994 hDV103S1A0JD37 113 aa12□□□□□ -0.49
PTPA-206ENST00000358994 HIGD2BQ4VC39 106 aa12□□□□□ -0.49
PTPA-206ENST00000358994 FAM30AQ9NZY2 134 aa12□□□□□ -0.49
PTPA-206ENST00000358994 LRCOL1A6NCL2 159 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 252 ms