RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 RBM12B-AS1Q9P1G2 102 aa6.85□□□□□ -1.31
CHD3-202ENST00000358181 C4orf26Q17RF5 130 aa6.84□□□□□ -1.31
CHD3-202ENST00000358181 LINC00574Q9H8X3 128 aa6.84□□□□□ -1.31
CHD3-202ENST00000358181 LINC01600Q96MT4 127 aa6.84□□□□□ -1.32
CHD3-202ENST00000358181 DSCR10P59022 87 aa6.83□□□□□ -1.32
CHD3-202ENST00000358181 OBSCN-AS1Q96MR7 158 aa6.83□□□□□ -1.32
CHD3-202ENST00000358181 CCDC168Q8NDH2 2452 aa6.83□□□□□ -1.32
CHD3-202ENST00000358181 SMIM1B2RUZ4 78 aa6.83□□□□□ -1.32
CHD3-202ENST00000358181 LINC00167Q96N53 147 aa6.83□□□□□ -1.32
CHD3-202ENST00000358181 RPS28P62857 69 aaKnown RBP6.83□□□□□ -1.32
CHD3-202ENST00000358181 IGF2RP11717 2491 aa6.83□□□□□ -1.32
CHD3-202ENST00000358181 TRAV22A0A0B4J277 110 aa6.82□□□□□ -1.32
CHD3-202ENST00000358181 WWC2-AS2Q96NR7 200 aa6.82□□□□□ -1.32
CHD3-202ENST00000358181 IGLV5-39A0A0G2JS06 123 aa6.82□□□□□ -1.32
CHD3-202ENST00000358181 IGLV1-51P01701 117 aa6.82□□□□□ -1.32
CHD3-202ENST00000358181 Q6ZSN1 163 aa6.82□□□□□ -1.32
CHD3-202ENST00000358181 CHCHD7Q9BUK0 85 aa6.82□□□□□ -1.32
CHD3-202ENST00000358181 ZNF580Q9UK33 172 aa6.82□□□□□ -1.32
CHD3-202ENST00000358181 Q8NBF4 154 aa6.82□□□□□ -1.32
CHD3-202ENST00000358181 IGLV1-40P01703 118 aa6.81□□□□□ -1.32
CHD3-202ENST00000358181 POLR2KP53803 58 aaKnown RBP6.8□□□□□ -1.32
CHD3-202ENST00000358181 KLLNB2CW77 178 aa6.79□□□□□ -1.32
CHD3-202ENST00000358181 TP53AIP1Q9HCN2 124 aa6.79□□□□□ -1.32
CHD3-202ENST00000358181 K7EQZ3 153 aa6.79□□□□□ -1.32
CHD3-202ENST00000358181 ADAMTSL4-AS1Q5T5F5 129 aa6.78□□□□□ -1.32
CHD3-202ENST00000358181 CXCL6P80162 114 aa6.78□□□□□ -1.32
CHD3-202ENST00000358181 NCOR2Q9Y618 2525 aa6.78□□□□□ -1.32
CHD3-202ENST00000358181 ST20-AS1Q8NBB2 130 aa6.78□□□□□ -1.32
CHD3-202ENST00000358181 NBDYA0A0U1RRE5 68 aa6.78□□□□□ -1.32
CHD3-202ENST00000358181 IGLV5-48A0A075B6I7 105 aa6.78□□□□□ -1.32
CHD3-202ENST00000358181 LINC00304Q8N9R0 145 aa6.78□□□□□ -1.32
CHD3-202ENST00000358181 LUZP6Q538Z0 58 aa6.77□□□□□ -1.33
CHD3-202ENST00000358181 C16orf95Q9H693 158 aa6.77□□□□□ -1.33
CHD3-202ENST00000358181 KIF25-AS1Q9Y6Z4 181 aa6.76□□□□□ -1.33
CHD3-202ENST00000358181 LINC00476Q8WZB0 136 aa6.76□□□□□ -1.33
CHD3-202ENST00000358181 CACNA1AO00555 2505 aa6.76□□□□□ -1.33
CHD3-202ENST00000358181 Q6ZQT0 140 aa6.76□□□□□ -1.33
CHD3-202ENST00000358181 IGLV5-45A0A087WSX0 123 aa6.75□□□□□ -1.33
CHD3-202ENST00000358181 CAMK2N1Q7Z7J9 78 aa6.75□□□□□ -1.33
CHD3-202ENST00000358181 TSPEAR-AS2P59090 65 aa6.74□□□□□ -1.33
CHD3-202ENST00000358181 C5orf42Q9H799 3197 aa6.74□□□□□ -1.33
CHD3-202ENST00000358181 LINC00483Q53H64 154 aa6.73□□□□□ -1.33
CHD3-202ENST00000358181 FAM168BA1KXE4 195 aa6.73□□□□□ -1.33
CHD3-202ENST00000358181 IGLV1-50A0A075B6I6 118 aa6.73□□□□□ -1.33
CHD3-202ENST00000358181 LINC00846Q9NV44 126 aa6.73□□□□□ -1.33
CHD3-202ENST00000358181 PLA2G2DQ9UNK4 145 aa6.71□□□□□ -1.33
CHD3-202ENST00000358181 CD164Q04900 197 aa6.71□□□□□ -1.34
CHD3-202ENST00000358181 MYO18BQ8IUG5 2567 aa6.71□□□□□ -1.34
CHD3-202ENST00000358181 KRTAP24-1Q3LI83 254 aa6.71□□□□□ -1.34
CHD3-202ENST00000358181 NAV2Q8IVL1 2488 aa6.71□□□□□ -1.34
CHD3-202ENST00000358181 DNAH10OSP0CZ25 163 aa6.71□□□□□ -1.34
CHD3-202ENST00000358181 IGIPA6NJ69 53 aa6.7□□□□□ -1.34
CHD3-202ENST00000358181 TM2D3Q9BRN9 247 aa6.7□□□□□ -1.34
CHD3-202ENST00000358181 TLX1NBP0CAT3 122 aa6.69□□□□□ -1.34
CHD3-202ENST00000358181 ANAPC11Q9NYG5 84 aa6.69□□□□□ -1.34
CHD3-202ENST00000358181 CEP350Q5VT06 3117 aa6.69□□□□□ -1.34
CHD3-202ENST00000358181 BCE1O60756 84 aa6.69□□□□□ -1.34
CHD3-202ENST00000358181 LINC00310P59036 64 aa6.69□□□□□ -1.34
CHD3-202ENST00000358181 DOPEY1Q5JWR5 2465 aa6.69□□□□□ -1.34
CHD3-202ENST00000358181 MIR22HGQ0VDD5 57 aa6.68□□□□□ -1.34
CHD3-202ENST00000358181 WIPF1O43516 503 aa6.68□□□□□ -1.34
CHD3-202ENST00000358181 Q8N1X5 172 aa6.68□□□□□ -1.34
CHD3-202ENST00000358181 Q6ZSA8 131 aa6.67□□□□□ -1.34
CHD3-202ENST00000358181 C2CD3Q4AC94 2353 aa6.67□□□□□ -1.34
CHD3-202ENST00000358181 LINC00588Q9Y4M8 146 aa6.67□□□□□ -1.34
CHD3-202ENST00000358181 URB1-AS1Q96HZ7 61 aa6.67□□□□□ -1.34
CHD3-202ENST00000358181 LINC00336Q6ZUF6 198 aa6.67□□□□□ -1.34
CHD3-202ENST00000358181 A0A1B0GUV1 79 aa6.66□□□□□ -1.34
CHD3-202ENST00000358181 CDC42SE1Q9NRR8 79 aa6.66□□□□□ -1.34
CHD3-202ENST00000358181 PSORS1C2Q9UIG4 136 aa6.65□□□□□ -1.34
CHD3-202ENST00000358181 C8orf17Q9NRJ1 99 aa6.65□□□□□ -1.34
CHD3-202ENST00000358181 COA5Q86WW8 74 aa6.65□□□□□ -1.35
CHD3-202ENST00000358181 MRPL34Q9BQ48 92 aaKnown RBP6.64□□□□□ -1.35
CHD3-202ENST00000358181 UQCR11O14957 56 aa6.64□□□□□ -1.35
CHD3-202ENST00000358181 COL27A1Q8IZC6 1860 aaPredicted RBP6.63□□□□□ -1.35
CHD3-202ENST00000358181 JMJD1CQ15652 2540 aa6.63□□□□□ -1.35
CHD3-202ENST00000358181 LRRK2Q5S007 2527 aa6.63□□□□□ -1.35
CHD3-202ENST00000358181 ZFYVE26Q68DK2 2539 aa6.62□□□□□ -1.35
CHD3-202ENST00000358181 IGHV3OR16-9A0A0B4J2B5 98 aa6.62□□□□□ -1.35
CHD3-202ENST00000358181 LOC101927531A0A1B0GV80 90 aa6.61□□□□□ -1.35
CHD3-202ENST00000358181 Q6ZRX8 168 aa6.61□□□□□ -1.35
CHD3-202ENST00000358181 PLAC4Q8WY50 150 aa6.6□□□□□ -1.35
CHD3-202ENST00000358181 Q5VSD8 79 aa6.6□□□□□ -1.35
CHD3-202ENST00000358181 C11orf72Q8NBR9 251 aa6.6□□□□□ -1.35
CHD3-202ENST00000358181 A0A0G2JQZ4 141 aa6.6□□□□□ -1.35
CHD3-202ENST00000358181 A0A1W2PNN7 141 aa6.6□□□□□ -1.35
CHD3-202ENST00000358181 LINC00528Q8N1L1 170 aa6.59□□□□□ -1.35
CHD3-202ENST00000358181 ELOF1P60002 83 aaKnown RBP6.59□□□□□ -1.35
CHD3-202ENST00000358181 AMELXQ99217 191 aa6.59□□□□□ -1.35
CHD3-202ENST00000358181 FN1P02751 2386 aaKnown RBP6.59□□□□□ -1.35
CHD3-202ENST00000358181 LINC01561Q8N1V8 128 aa6.58□□□□□ -1.36
CHD3-202ENST00000358181 A8MWP4 228 aa6.58□□□□□ -1.36
CHD3-202ENST00000358181 TLN2Q9Y4G6 2542 aa6.58□□□□□ -1.36
CHD3-202ENST00000358181 TRBV7-4A0A0J9YYF1 115 aa6.57□□□□□ -1.36
CHD3-202ENST00000358181 A8MUN3 132 aa6.57□□□□□ -1.36
CHD3-202ENST00000358181 ERC2-IT1O76042 136 aa6.56□□□□□ -1.36
CHD3-202ENST00000358181 ABCA12Q86UK0 2595 aa6.55□□□□□ -1.36
CHD3-202ENST00000358181 C10orf142B7Z368 130 aa6.54□□□□□ -1.36
CHD3-202ENST00000358181 PRO0461Q9UI25 63 aa6.54□□□□□ -1.36
CHD3-202ENST00000358181 CNFNQ9BYD5 112 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms