RNA–Protein interactions for RNA: ENST00000355451.7

NUDCD3-202, Transcript of NudC domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD3, Length 8,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-202ENST00000355451 IGLV1-51P01701 117 aa8.17□□□□□ -1.1
NUDCD3-202ENST00000355451 WWC2-AS2Q96NR7 200 aa8.16□□□□□ -1.1
NUDCD3-202ENST00000355451 IGLV6-57P01721 117 aa8.16□□□□□ -1.1
NUDCD3-202ENST00000355451 SMIM29Q86T20 159 aa8.16□□□□□ -1.1
NUDCD3-202ENST00000355451 LINC01600Q96MT4 127 aa8.15□□□□□ -1.1
NUDCD3-202ENST00000355451 Q8NBF4 154 aa8.15□□□□□ -1.1
NUDCD3-202ENST00000355451 C9orf92A6NGG3 77 aa8.15□□□□□ -1.11
NUDCD3-202ENST00000355451 KLLNB2CW77 178 aa8.15□□□□□ -1.11
NUDCD3-202ENST00000355451 KIF25-AS1Q9Y6Z4 181 aa8.14□□□□□ -1.11
NUDCD3-202ENST00000355451 CRIP1P50238 77 aa8.14□□□□□ -1.11
NUDCD3-202ENST00000355451 SETD2Q9BYW2 2564 aaPredicted RBP8.13□□□□□ -1.11
NUDCD3-202ENST00000355451 PHF5AQ7RTV0 110 aaKnown RBP8.13□□□□□ -1.11
NUDCD3-202ENST00000355451 TP73-AS1Q9UF72 201 aa8.13□□□□□ -1.11
NUDCD3-202ENST00000355451 IGLV1-40P01703 118 aa8.12□□□□□ -1.11
NUDCD3-202ENST00000355451 SMIM1B2RUZ4 78 aa8.11□□□□□ -1.11
NUDCD3-202ENST00000355451 ODF3L2Q3SX64 289 aa8.11□□□□□ -1.11
NUDCD3-202ENST00000355451 A0A1W2PNU3 283 aaPredicted RBP8.1□□□□□ -1.11
NUDCD3-202ENST00000355451 LINC00483Q53H64 154 aa8.1□□□□□ -1.11
NUDCD3-202ENST00000355451 PRR9Q5T870 116 aa8.1□□□□□ -1.11
NUDCD3-202ENST00000355451 XIRP2A4UGR9 3374 aa8.1□□□□□ -1.11
NUDCD3-202ENST00000355451 WISP2O76076 250 aa8.1□□□□□ -1.11
NUDCD3-202ENST00000355451 SPTBN4Q9H254 2564 aa8.09□□□□□ -1.11
NUDCD3-202ENST00000355451 A0A1B0GUV1 79 aa8.09□□□□□ -1.11
NUDCD3-202ENST00000355451 ANKRD17O75179 2603 aaKnown RBP8.09□□□□□ -1.11
NUDCD3-202ENST00000355451 C16orf95Q9H693 158 aa8.09□□□□□ -1.11
NUDCD3-202ENST00000355451 COL27A1Q8IZC6 1860 aaPredicted RBP8.09□□□□□ -1.11
NUDCD3-202ENST00000355451 COL4A4P53420 1690 aaPredicted RBP8.08□□□□□ -1.12
NUDCD3-202ENST00000355451 LINC00315P59091 139 aa8.08□□□□□ -1.12
NUDCD3-202ENST00000355451 A0A0D9SG42 100 aa8.08□□□□□ -1.12
NUDCD3-202ENST00000355451 LINC00304Q8N9R0 145 aa8.08□□□□□ -1.12
NUDCD3-202ENST00000355451 LINC00167Q96N53 147 aa8.07□□□□□ -1.12
NUDCD3-202ENST00000355451 ZNF575Q86XF7 245 aa8.07□□□□□ -1.12
NUDCD3-202ENST00000355451 KRTAP10-9P60411 292 aa8.07□□□□□ -1.12
NUDCD3-202ENST00000355451 POLR2KP53803 58 aaKnown RBP8.06□□□□□ -1.12
NUDCD3-202ENST00000355451 NBDYA0A0U1RRE5 68 aa8.06□□□□□ -1.12
NUDCD3-202ENST00000355451 LINC00574Q9H8X3 128 aa8.05□□□□□ -1.12
NUDCD3-202ENST00000355451 CR1P17927 2039 aa8.05□□□□□ -1.12
NUDCD3-202ENST00000355451 USP24Q9UPU5 2620 aa8.05□□□□□ -1.12
NUDCD3-202ENST00000355451 IGLV5-39A0A0G2JS06 123 aa8.04□□□□□ -1.12
NUDCD3-202ENST00000355451 CAMK2N1Q7Z7J9 78 aa8.04□□□□□ -1.12
NUDCD3-202ENST00000355451 OBSCN-AS1Q96MR7 158 aa8.03□□□□□ -1.12
NUDCD3-202ENST00000355451 LTBP2Q14767 1821 aa8.03□□□□□ -1.12
NUDCD3-202ENST00000355451 Q6ZQT0 140 aa8.03□□□□□ -1.12
NUDCD3-202ENST00000355451 UQCR11O14957 56 aa8.03□□□□□ -1.12
NUDCD3-202ENST00000355451 SMR3BP02814 79 aaPredicted RBP8.02□□□□□ -1.13
NUDCD3-202ENST00000355451 IGF2RP11717 2491 aa8.02□□□□□ -1.13
NUDCD3-202ENST00000355451 LINC00476Q8WZB0 136 aa8.01□□□□□ -1.13
NUDCD3-202ENST00000355451 AVPP01185 164 aa8.01□□□□□ -1.13
NUDCD3-202ENST00000355451 Q6ZSN1 163 aa8.01□□□□□ -1.13
NUDCD3-202ENST00000355451 COL4A3Q01955 1670 aa8□□□□□ -1.13
NUDCD3-202ENST00000355451 C8orf17Q9NRJ1 99 aa8□□□□□ -1.13
NUDCD3-202ENST00000355451 POLQO75417 2590 aa8□□□□□ -1.13
NUDCD3-202ENST00000355451 LINC01561Q8N1V8 128 aa8□□□□□ -1.13
NUDCD3-202ENST00000355451 LOC101927531A0A1B0GV80 90 aa8□□□□□ -1.13
NUDCD3-202ENST00000355451 BCE1O60756 84 aa8□□□□□ -1.13
NUDCD3-202ENST00000355451 IGIPA6NJ69 53 aa7.99□□□□□ -1.13
NUDCD3-202ENST00000355451 C11orf1Q9H5F2 150 aa7.99□□□□□ -1.13
NUDCD3-202ENST00000355451 IGLV5-48A0A075B6I7 105 aa7.99□□□□□ -1.13
NUDCD3-202ENST00000355451 ST20-AS1Q8NBB2 130 aa7.99□□□□□ -1.13
NUDCD3-202ENST00000355451 EPG5Q9HCE0 2579 aa7.99□□□□□ -1.13
NUDCD3-202ENST00000355451 C11orf21Q9P2W6 132 aa7.98□□□□□ -1.13
NUDCD3-202ENST00000355451 H3BPC8 53 aa7.98□□□□□ -1.13
NUDCD3-202ENST00000355451 K7EQZ3 153 aa7.98□□□□□ -1.13
NUDCD3-202ENST00000355451 CDC42SE1Q9NRR8 79 aa7.98□□□□□ -1.13
NUDCD3-202ENST00000355451 ADAMTSL4-AS1Q5T5F5 129 aa7.97□□□□□ -1.13
NUDCD3-202ENST00000355451 MIR22HGQ0VDD5 57 aa7.96□□□□□ -1.13
NUDCD3-202ENST00000355451 LINC00846Q9NV44 126 aa7.96□□□□□ -1.14
NUDCD3-202ENST00000355451 DSCR10P59022 87 aa7.95□□□□□ -1.14
NUDCD3-202ENST00000355451 LAMA2P24043 3122 aaKnown RBP7.95□□□□□ -1.14
NUDCD3-202ENST00000355451 GAS8-AS1O95177 125 aa7.95□□□□□ -1.14
NUDCD3-202ENST00000355451 Q6ZSA8 131 aa7.94□□□□□ -1.14
NUDCD3-202ENST00000355451 MKI67P46013 3256 aaKnown RBP7.94□□□□□ -1.14
NUDCD3-202ENST00000355451 IGHV3OR16-9A0A0B4J2B5 98 aa7.94□□□□□ -1.14
NUDCD3-202ENST00000355451 PCSK5Q92824 1860 aa7.93□□□□□ -1.14
NUDCD3-202ENST00000355451 C2orf91Q6ZV80 131 aa7.93□□□□□ -1.14
NUDCD3-202ENST00000355451 MRPL34Q9BQ48 92 aaKnown RBP7.93□□□□□ -1.14
NUDCD3-202ENST00000355451 PRO3102Q9H379 93 aa7.92□□□□□ -1.14
NUDCD3-202ENST00000355451 PSORS1C2Q9UIG4 136 aa7.92□□□□□ -1.14
NUDCD3-202ENST00000355451 C11orf72Q8NBR9 251 aa7.91□□□□□ -1.14
NUDCD3-202ENST00000355451 IGLV5-45A0A087WSX0 123 aa7.91□□□□□ -1.14
NUDCD3-202ENST00000355451 Q6ZRX8 168 aa7.91□□□□□ -1.14
NUDCD3-202ENST00000355451 PRO0628Q9UI54 55 aa7.91□□□□□ -1.14
NUDCD3-202ENST00000355451 ERC2-IT1O76042 136 aa7.89□□□□□ -1.15
NUDCD3-202ENST00000355451 AMELXQ99217 191 aa7.89□□□□□ -1.15
NUDCD3-202ENST00000355451 CDSNQ15517 529 aa7.89□□□□□ -1.15
NUDCD3-202ENST00000355451 BRCA2P51587 3418 aa7.89□□□□□ -1.15
NUDCD3-202ENST00000355451 ZNF580Q9UK33 172 aa7.89□□□□□ -1.15
NUDCD3-202ENST00000355451 LAMA3Q16787 3333 aa7.89□□□□□ -1.15
NUDCD3-202ENST00000355451 LINC00336Q6ZUF6 198 aa7.89□□□□□ -1.15
NUDCD3-202ENST00000355451 A0A1B0GW54 56 aa7.89□□□□□ -1.15
NUDCD3-202ENST00000355451 A8MWP4 228 aa7.88□□□□□ -1.15
NUDCD3-202ENST00000355451 BPTFQ12830 3046 aa7.88□□□□□ -1.15
NUDCD3-202ENST00000355451 TM2D3Q9BRN9 247 aa7.88□□□□□ -1.15
NUDCD3-202ENST00000355451 FASNP49327 2511 aaKnown RBP7.88□□□□□ -1.15
NUDCD3-202ENST00000355451 TSPEAR-AS2P59090 65 aa7.87□□□□□ -1.15
NUDCD3-202ENST00000355451 USP9YO00507 2555 aaPredicted RBP7.87□□□□□ -1.15
NUDCD3-202ENST00000355451 COA5Q86WW8 74 aa7.87□□□□□ -1.15
NUDCD3-202ENST00000355451 LINC00588Q9Y4M8 146 aa7.87□□□□□ -1.15
NUDCD3-202ENST00000355451 RPS28P62857 69 aaKnown RBP7.86□□□□□ -1.15
NUDCD3-202ENST00000355451 CNFNQ9BYD5 112 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms