RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 TRAV12-1A0A0B4J245 112 aa3.64□□□□□ -1.83
CD47-201ENST00000355354 COTL1Q14019 142 aa3.64□□□□□ -1.83
CD47-201ENST00000355354 C4orf26Q17RF5 130 aa3.64□□□□□ -1.83
CD47-201ENST00000355354 K7ERU9 68 aa3.64□□□□□ -1.83
CD47-201ENST00000355354 TRAV21A0A0B4J279 112 aa3.64□□□□□ -1.83
CD47-201ENST00000355354 J3QR89 54 aa3.63□□□□□ -1.83
CD47-201ENST00000355354 MRPL53Q96EL3 112 aaKnown RBP3.63□□□□□ -1.83
CD47-201ENST00000355354 CBY1Q9Y3M2 126 aa3.63□□□□□ -1.83
CD47-201ENST00000355354 hADV29S1A0JD25 119 aa3.63□□□□□ -1.83
CD47-201ENST00000355354 GHRHP01286 108 aa3.63□□□□□ -1.83
CD47-201ENST00000355354 TRBV6-5A0A0K0K1A5 114 aa3.63□□□□□ -1.83
CD47-201ENST00000355354 A6NDN8 102 aa3.63□□□□□ -1.83
CD47-201ENST00000355354 NDUFV3P56181 108 aaKnown RBP3.63□□□□□ -1.83
CD47-201ENST00000355354 A0A087X002 238 aa3.63□□□□□ -1.83
CD47-201ENST00000355354 RPL13AP40429 203 aaKnown RBP3.63□□□□□ -1.83
CD47-201ENST00000355354 ENHOQ6UWT2 76 aa3.63□□□□□ -1.83
CD47-201ENST00000355354 NOTCH2NLQ7Z3S9 236 aa3.63□□□□□ -1.83
CD47-201ENST00000355354 DGAT2L7PQ6IED9 249 aa3.62□□□□□ -1.83
CD47-201ENST00000355354 MRAPQ8TCY5 172 aa3.62□□□□□ -1.83
CD47-201ENST00000355354 PKIGQ9Y2B9 76 aa3.62□□□□□ -1.83
CD47-201ENST00000355354 MUC17Q685J3 4493 aa3.62□□□□□ -1.83
CD47-201ENST00000355354 IGHV1-58A0A0C4DH39 117 aa3.62□□□□□ -1.83
CD47-201ENST00000355354 LST1O00453 97 aa3.62□□□□□ -1.83
CD47-201ENST00000355354 TIMM21Q9BVV7 248 aa3.62□□□□□ -1.83
CD47-201ENST00000355354 TMEM238LA0A1B0GVL6 79 aa3.62□□□□□ -1.83
CD47-201ENST00000355354 A6NJY4 79 aa3.62□□□□□ -1.83
CD47-201ENST00000355354 ST20-AS1Q8NBB2 130 aa3.62□□□□□ -1.83
CD47-201ENST00000355354 UPK3BQ9BT76 320 aa3.62□□□□□ -1.83
CD47-201ENST00000355354 FAM236AA0A1B0GUQ0 79 aa3.61□□□□□ -1.83
CD47-201ENST00000355354 FAM236BA0A1B0GV22 79 aa3.61□□□□□ -1.83
CD47-201ENST00000355354 CHTF8P0CG12 524 aa3.61□□□□□ -1.83
CD47-201ENST00000355354 HIGD2BQ4VC39 106 aa3.61□□□□□ -1.83
CD47-201ENST00000355354 UBE2L6O14933 153 aa3.61□□□□□ -1.83
CD47-201ENST00000355354 SERTAD4-AS1Q5TG53 156 aa3.61□□□□□ -1.83
CD47-201ENST00000355354 MUC7Q8TAX7 377 aa3.61□□□□□ -1.83
CD47-201ENST00000355354 ATP5LO75964 103 aa3.61□□□□□ -1.83
CD47-201ENST00000355354 OBSCN-AS1Q96MR7 158 aa3.61□□□□□ -1.83
CD47-201ENST00000355354 KLK12Q9UKR0 248 aa3.61□□□□□ -1.83
CD47-201ENST00000355354 LINC01619G3V211 115 aa3.61□□□□□ -1.83
CD47-201ENST00000355354 ICOSQ9Y6W8 199 aa3.61□□□□□ -1.83
CD47-201ENST00000355354 IGLV5-45A0A087WSX0 123 aa3.6□□□□□ -1.83
CD47-201ENST00000355354 TMEM126AQ9H061 195 aa3.6□□□□□ -1.83
CD47-201ENST00000355354 FP248Q71RG6 208 aaPredicted RBP3.6□□□□□ -1.83
CD47-201ENST00000355354 TIMM17AQ99595 171 aa3.6□□□□□ -1.83
CD47-201ENST00000355354 F8W1H4 67 aa3.59□□□□□ -1.83
CD47-201ENST00000355354 HTN3P15516 51 aa3.59□□□□□ -1.83
CD47-201ENST00000355354 TMEM141Q96I45 108 aa3.59□□□□□ -1.83
CD47-201ENST00000355354 LENEPQ9Y5L5 61 aa3.59□□□□□ -1.83
CD47-201ENST00000355354 CCL24O00175 119 aa3.59□□□□□ -1.84
CD47-201ENST00000355354 Q6ZTC4 211 aa3.59□□□□□ -1.84
CD47-201ENST00000355354 BPY2O14599 106 aa3.59□□□□□ -1.84
CD47-201ENST00000355354 C6orf99Q4VX62 202 aa3.59□□□□□ -1.84
CD47-201ENST00000355354 Q6ZRP5 223 aa3.59□□□□□ -1.84
CD47-201ENST00000355354 STHQ8IWL8 128 aa3.59□□□□□ -1.84
CD47-201ENST00000355354 LINC00476Q8WZB0 136 aa3.59□□□□□ -1.84
CD47-201ENST00000355354 PLNP26678 52 aa3.58□□□□□ -1.84
CD47-201ENST00000355354 KRTAP10-4P60372 401 aaPredicted RBP3.58□□□□□ -1.84
CD47-201ENST00000355354 ZNF415Q09FC8 603 aa3.58□□□□□ -1.84
CD47-201ENST00000355354 VCYO14598 125 aa3.58□□□□□ -1.84
CD47-201ENST00000355354 ORMDL2Q53FV1 153 aa3.58□□□□□ -1.84
CD47-201ENST00000355354 PRR4Q16378 134 aa3.58□□□□□ -1.84
CD47-201ENST00000355354 MIAQ16674 131 aa3.58□□□□□ -1.84
CD47-201ENST00000355354 Q5XG85 94 aa3.58□□□□□ -1.84
CD47-201ENST00000355354 TRAV23DV6A0A075B6W5 121 aa3.58□□□□□ -1.84
CD47-201ENST00000355354 TRAV25A0A0B4J276 109 aa3.58□□□□□ -1.84
CD47-201ENST00000355354 ERG28Q9UKR5 140 aa3.58□□□□□ -1.84
CD47-201ENST00000355354 INSP01308 110 aa3.57□□□□□ -1.84
CD47-201ENST00000355354 M0QXV9 152 aa3.57□□□□□ -1.84
CD47-201ENST00000355354 Q6ZR54 194 aa3.57□□□□□ -1.84
CD47-201ENST00000355354 MRAP2Q96G30 205 aa3.57□□□□□ -1.84
CD47-201ENST00000355354 OVOL2Q9BRP0 275 aa3.57□□□□□ -1.84
CD47-201ENST00000355354 LINC00959A0A1B0GUT2 108 aa3.56□□□□□ -1.84
CD47-201ENST00000355354 APOC4P55056 127 aa3.56□□□□□ -1.84
CD47-201ENST00000355354 C6orf48Q9UBA6 75 aa3.56□□□□□ -1.84
CD47-201ENST00000355354 SNURFQ9Y675 71 aa3.56□□□□□ -1.84
CD47-201ENST00000355354 IGHV4-30-4P0DP06 118 aa3.56□□□□□ -1.84
CD47-201ENST00000355354 Q8NAQ8 132 aa3.56□□□□□ -1.84
CD47-201ENST00000355354 K7EQD1 137 aa3.56□□□□□ -1.84
CD47-201ENST00000355354 C9orf66Q5T8R8 295 aa3.56□□□□□ -1.84
CD47-201ENST00000355354 GTF2H5Q6ZYL4 71 aa3.56□□□□□ -1.84
CD47-201ENST00000355354 MRPL52Q86TS9 123 aaKnown RBP3.56□□□□□ -1.84
CD47-201ENST00000355354 COX6CP09669 75 aa3.56□□□□□ -1.84
CD47-201ENST00000355354 RPL18AQ02543 176 aaKnown RBP3.56□□□□□ -1.84
CD47-201ENST00000355354 LINC01547P58512 204 aaPredicted RBP3.55□□□□□ -1.84
CD47-201ENST00000355354 RPL37AP8A6NKH3 93 aa3.55□□□□□ -1.84
CD47-201ENST00000355354 Q9BRP9 147 aa3.55□□□□□ -1.84
CD47-201ENST00000355354 DNAH10OSP0CZ25 163 aa3.55□□□□□ -1.84
CD47-201ENST00000355354 SCGB1C2P0DMR2 95 aa3.54□□□□□ -1.84
CD47-201ENST00000355354 GYPEP15421 78 aa3.54□□□□□ -1.84
CD47-201ENST00000355354 LGALS3P17931 250 aaKnown RBP3.54□□□□□ -1.84
CD47-201ENST00000355354 ESRGQ1W209 222 aa3.54□□□□□ -1.84
CD47-201ENST00000355354 SND1-IT1Q9HBX3 110 aa3.54□□□□□ -1.84
CD47-201ENST00000355354 TMEM262E9PQX1 116 aa3.54□□□□□ -1.84
CD47-201ENST00000355354 RMI2Q96E14 147 aa3.54□□□□□ -1.84
CD47-201ENST00000355354 A0A096LNI7 61 aa3.54□□□□□ -1.84
CD47-201ENST00000355354 TRBV6-8A0A0A6YYG3 113 aa3.54□□□□□ -1.84
CD47-201ENST00000355354 Q1RN00 199 aa3.54□□□□□ -1.84
CD47-201ENST00000355354 C15orf56Q8N910 161 aa3.54□□□□□ -1.84
CD47-201ENST00000355354 TRBV30A0A0K0K1B3 111 aa3.53□□□□□ -1.84
CD47-201ENST00000355354 RTL8CO15255 209 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms