RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 C16orf95Q9H693 158 aa4.08□□□□□ -1.76
SRGAP1-201ENST00000355086 AVPP01185 164 aa4.08□□□□□ -1.76
SRGAP1-201ENST00000355086 TYMSOSQ8TAI1 123 aa4.08□□□□□ -1.76
SRGAP1-201ENST00000355086 KIAA0087Q14695 138 aa4.08□□□□□ -1.76
SRGAP1-201ENST00000355086 LINC00313P59037 77 aa4.08□□□□□ -1.76
SRGAP1-201ENST00000355086 VPREB1P12018 145 aa4.07□□□□□ -1.76
SRGAP1-201ENST00000355086 ATP11AUNQ6ZP68 121 aa4.06□□□□□ -1.76
SRGAP1-201ENST00000355086 COL5A1P20908 1838 aaPredicted RBP4.06□□□□□ -1.76
SRGAP1-201ENST00000355086 CENPFP49454 3210 aa4.06□□□□□ -1.76
SRGAP1-201ENST00000355086 Q6ZSN1 163 aa4.06□□□□□ -1.76
SRGAP1-201ENST00000355086 MDFIQ99750 246 aa4.06□□□□□ -1.76
SRGAP1-201ENST00000355086 CDSNQ15517 529 aa4.06□□□□□ -1.76
SRGAP1-201ENST00000355086 LTBP2Q14767 1821 aa4.06□□□□□ -1.76
SRGAP1-201ENST00000355086 C8orf87E5RJ46 101 aa4.06□□□□□ -1.76
SRGAP1-201ENST00000355086 KRTAP10-9P60411 292 aa4.05□□□□□ -1.76
SRGAP1-201ENST00000355086 BPTFQ12830 3046 aa4.05□□□□□ -1.76
SRGAP1-201ENST00000355086 SPATA3Q8NHX4 192 aa4.05□□□□□ -1.76
SRGAP1-201ENST00000355086 ANKRD17O75179 2603 aaKnown RBP4.05□□□□□ -1.76
SRGAP1-201ENST00000355086 CHTF8P0CG12 524 aa4.05□□□□□ -1.76
SRGAP1-201ENST00000355086 C16orf90A8MZG2 172 aa4.05□□□□□ -1.76
SRGAP1-201ENST00000355086 LINC00167Q96N53 147 aa4.04□□□□□ -1.76
SRGAP1-201ENST00000355086 URB1-AS1Q96HZ7 61 aa4.04□□□□□ -1.76
SRGAP1-201ENST00000355086 Q96NJ1 140 aa4.04□□□□□ -1.76
SRGAP1-201ENST00000355086 SSBP3-AS1Q7Z2R9 100 aa4.03□□□□□ -1.76
SRGAP1-201ENST00000355086 TRAV22A0A0B4J277 110 aa4.03□□□□□ -1.76
SRGAP1-201ENST00000355086 KIF25-AS1Q9Y6Z4 181 aa4.03□□□□□ -1.76
SRGAP1-201ENST00000355086 PRO0628Q9UI54 55 aa4.03□□□□□ -1.76
SRGAP1-201ENST00000355086 COX6B2Q6YFQ2 88 aa4.03□□□□□ -1.76
SRGAP1-201ENST00000355086 Q6ZRP5 223 aa4.03□□□□□ -1.76
SRGAP1-201ENST00000355086 J3QL48 77 aa4.03□□□□□ -1.76
SRGAP1-201ENST00000355086 PHF5AQ7RTV0 110 aaKnown RBP4.02□□□□□ -1.77
SRGAP1-201ENST00000355086 H3BPC8 53 aa4.02□□□□□ -1.77
SRGAP1-201ENST00000355086 RTL8CO15255 209 aa4.02□□□□□ -1.77
SRGAP1-201ENST00000355086 COL4A4P53420 1690 aaPredicted RBP4.01□□□□□ -1.77
SRGAP1-201ENST00000355086 C11orf72Q8NBR9 251 aa4.01□□□□□ -1.77
SRGAP1-201ENST00000355086 LINC00476Q8WZB0 136 aa4.01□□□□□ -1.77
SRGAP1-201ENST00000355086 LINC00310P59036 64 aa4.01□□□□□ -1.77
SRGAP1-201ENST00000355086 CRIPTQ9P021 101 aa4.01□□□□□ -1.77
SRGAP1-201ENST00000355086 Q8NBF4 154 aa4.01□□□□□ -1.77
SRGAP1-201ENST00000355086 C4orf26Q17RF5 130 aa4.01□□□□□ -1.77
SRGAP1-201ENST00000355086 COX8CQ7Z4L0 72 aa4□□□□□ -1.77
SRGAP1-201ENST00000355086 A0A1B0GW54 56 aa4□□□□□ -1.77
SRGAP1-201ENST00000355086 BCE1O60756 84 aa4□□□□□ -1.77
SRGAP1-201ENST00000355086 LINC00315P59091 139 aa4□□□□□ -1.77
SRGAP1-201ENST00000355086 APLNQ9ULZ1 77 aa3.99□□□□□ -1.77
SRGAP1-201ENST00000355086 EPM2AB3EWF7 344 aa3.99□□□□□ -1.77
SRGAP1-201ENST00000355086 LINC01600Q96MT4 127 aa3.99□□□□□ -1.77
SRGAP1-201ENST00000355086 RPL37AP61513 92 aaKnown RBP3.99□□□□□ -1.77
SRGAP1-201ENST00000355086 IGHV3OR16-9A0A0B4J2B5 98 aa3.99□□□□□ -1.77
SRGAP1-201ENST00000355086 ELOF1P60002 83 aaKnown RBP3.98□□□□□ -1.77
SRGAP1-201ENST00000355086 Q6ZRX8 168 aa3.98□□□□□ -1.77
SRGAP1-201ENST00000355086 A0A096LNJ9 63 aa3.98□□□□□ -1.77
SRGAP1-201ENST00000355086 IGLV5-39A0A0G2JS06 123 aa3.98□□□□□ -1.77
SRGAP1-201ENST00000355086 CDIP1Q9H305 208 aa3.98□□□□□ -1.77
SRGAP1-201ENST00000355086 NBDYA0A0U1RRE5 68 aa3.97□□□□□ -1.77
SRGAP1-201ENST00000355086 Q6ZQT0 140 aa3.97□□□□□ -1.77
SRGAP1-201ENST00000355086 UQCR11O14957 56 aa3.96□□□□□ -1.77
SRGAP1-201ENST00000355086 ST20-AS1Q8NBB2 130 aa3.96□□□□□ -1.77
SRGAP1-201ENST00000355086 LOC101927531A0A1B0GV80 90 aa3.96□□□□□ -1.78
SRGAP1-201ENST00000355086 EPG5Q9HCE0 2579 aa3.96□□□□□ -1.78
SRGAP1-201ENST00000355086 COL27A1Q8IZC6 1860 aaPredicted RBP3.95□□□□□ -1.78
SRGAP1-201ENST00000355086 TRBV7-4A0A0J9YYF1 115 aa3.95□□□□□ -1.78
SRGAP1-201ENST00000355086 A8MWP4 228 aa3.95□□□□□ -1.78
SRGAP1-201ENST00000355086 A0A1W2PPR1 153 aa3.95□□□□□ -1.78
SRGAP1-201ENST00000355086 CEP295Q9C0D2 2601 aa3.95□□□□□ -1.78
SRGAP1-201ENST00000355086 LOC110117498A0A087WWA1 95 aa3.95□□□□□ -1.78
SRGAP1-201ENST00000355086 TM2D3Q9BRN9 247 aa3.95□□□□□ -1.78
SRGAP1-201ENST00000355086 FAM218AQ96MZ4 157 aa3.95□□□□□ -1.78
SRGAP1-201ENST00000355086 RPS28P62857 69 aaKnown RBP3.95□□□□□ -1.78
SRGAP1-201ENST00000355086 COA5Q86WW8 74 aa3.94□□□□□ -1.78
SRGAP1-201ENST00000355086 PRO3102Q9H379 93 aa3.94□□□□□ -1.78
SRGAP1-201ENST00000355086 H3BNG1 76 aa3.94□□□□□ -1.78
SRGAP1-201ENST00000355086 MRPL34Q9BQ48 92 aaKnown RBP3.94□□□□□ -1.78
SRGAP1-201ENST00000355086 PRRC2CQ9Y520 2896 aaKnown RBP3.93□□□□□ -1.78
SRGAP1-201ENST00000355086 C9orf129Q5T035 196 aaKnown RBP3.93□□□□□ -1.78
SRGAP1-201ENST00000355086 FAM19A4Q96LR4 140 aa3.93□□□□□ -1.78
SRGAP1-201ENST00000355086 LINC01546A6NGU7 62 aa3.93□□□□□ -1.78
SRGAP1-201ENST00000355086 MGAM2Q2M2H8 2515 aa3.93□□□□□ -1.78
SRGAP1-201ENST00000355086 IGLV6-57P01721 117 aa3.93□□□□□ -1.78
SRGAP1-201ENST00000355086 GVQW2A0A096LPI5 108 aaPredicted RBP3.92□□□□□ -1.78
SRGAP1-201ENST00000355086 MIR22HGQ0VDD5 57 aa3.92□□□□□ -1.78
SRGAP1-201ENST00000355086 LINC00588Q9Y4M8 146 aa3.92□□□□□ -1.78
SRGAP1-201ENST00000355086 CYP4F30PQ9H0H9 118 aa3.92□□□□□ -1.78
SRGAP1-201ENST00000355086 IGLV5-45A0A087WSX0 123 aa3.92□□□□□ -1.78
SRGAP1-201ENST00000355086 WWC2-AS2Q96NR7 200 aa3.92□□□□□ -1.78
SRGAP1-201ENST00000355086 LUZP6Q538Z0 58 aa3.91□□□□□ -1.78
SRGAP1-201ENST00000355086 C9orf92A6NGG3 77 aa3.91□□□□□ -1.78
SRGAP1-201ENST00000355086 LINC01554Q52M75 96 aa3.91□□□□□ -1.78
SRGAP1-201ENST00000355086 LINC00304Q8N9R0 145 aa3.91□□□□□ -1.78
SRGAP1-201ENST00000355086 RBM12B-AS1Q9P1G2 102 aa3.91□□□□□ -1.78
SRGAP1-201ENST00000355086 K7EQZ3 153 aa3.91□□□□□ -1.78
SRGAP1-201ENST00000355086 FAM168BA1KXE4 195 aa3.91□□□□□ -1.78
SRGAP1-201ENST00000355086 DSCR10P59022 87 aa3.91□□□□□ -1.78
SRGAP1-201ENST00000355086 ATRQ13535 2644 aa3.91□□□□□ -1.78
SRGAP1-201ENST00000355086 CR1P17927 2039 aa3.91□□□□□ -1.78
SRGAP1-201ENST00000355086 MAST4O15021 2626 aa3.9□□□□□ -1.78
SRGAP1-201ENST00000355086 IGLV5-37A0A075B6J1 123 aa3.9□□□□□ -1.79
SRGAP1-201ENST00000355086 DNAH10OSP0CZ25 163 aa3.9□□□□□ -1.79
SRGAP1-201ENST00000355086 OBSCN-AS1Q96MR7 158 aa3.9□□□□□ -1.79
SRGAP1-201ENST00000355086 A8MUN3 132 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms