RNA–Protein interactions for RNA: ENST00000347545.8

ARHGEF1-202, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-202ENST00000347545 TEP1Q99973 2627 aaKnown RBP9.82□□□□□ -0.84
ARHGEF1-202ENST00000347545 LELP1Q5T871 98 aa9.82□□□□□ -0.84
ARHGEF1-202ENST00000347545 WFDC9Q8NEX5 89 aa9.82□□□□□ -0.84
ARHGEF1-202ENST00000347545 C5orf47Q569G3 176 aa9.81□□□□□ -0.84
ARHGEF1-202ENST00000347545 ATOX1O00244 68 aa9.81□□□□□ -0.84
ARHGEF1-202ENST00000347545 CRYGAP11844 174 aa9.81□□□□□ -0.84
ARHGEF1-202ENST00000347545 PRR34Q9NV39 138 aa9.81□□□□□ -0.84
ARHGEF1-202ENST00000347545 HIST1H4AP62805 103 aaKnown RBP9.81□□□□□ -0.84
ARHGEF1-202ENST00000347545 SPAG11BQ08648 103 aa9.81□□□□□ -0.84
ARHGEF1-202ENST00000347545 ENHOQ6UWT2 76 aa9.81□□□□□ -0.84
ARHGEF1-202ENST00000347545 ATRQ13535 2644 aa9.8□□□□□ -0.84
ARHGEF1-202ENST00000347545 SPART-AS1P0CW21 52 aa9.8□□□□□ -0.84
ARHGEF1-202ENST00000347545 IGHV4-30-4P0DP06 118 aa9.8□□□□□ -0.84
ARHGEF1-202ENST00000347545 RPL18AQ02543 176 aaKnown RBP9.8□□□□□ -0.84
ARHGEF1-202ENST00000347545 C6orf99Q4VX62 202 aa9.8□□□□□ -0.84
ARHGEF1-202ENST00000347545 OXTP01178 125 aa9.79□□□□□ -0.84
ARHGEF1-202ENST00000347545 KLK12Q9UKR0 248 aa9.79□□□□□ -0.84
ARHGEF1-202ENST00000347545 CYSRT1A8MQ03 144 aa9.79□□□□□ -0.84
ARHGEF1-202ENST00000347545 ANK2Q01484 3957 aa9.78□□□□□ -0.84
ARHGEF1-202ENST00000347545 A0A0J9YWU9 116 aa9.78□□□□□ -0.84
ARHGEF1-202ENST00000347545 CCKP06307 115 aa9.78□□□□□ -0.84
ARHGEF1-202ENST00000347545 Q6JHZ5 121 aa9.78□□□□□ -0.84
ARHGEF1-202ENST00000347545 C4orf26Q17RF5 130 aa9.77□□□□□ -0.84
ARHGEF1-202ENST00000347545 DPH3Q96FX2 82 aa9.77□□□□□ -0.84
ARHGEF1-202ENST00000347545 CMYA5Q8N3K9 4069 aa9.76□□□□□ -0.85
ARHGEF1-202ENST00000347545 USP17L23D6RBM5 183 aa9.76□□□□□ -0.85
ARHGEF1-202ENST00000347545 LYPD5Q6UWN5 251 aa9.76□□□□□ -0.85
ARHGEF1-202ENST00000347545 LINC00575Q6W349 94 aa9.76□□□□□ -0.85
ARHGEF1-202ENST00000347545 PKD1L1Q8TDX9 2849 aa9.75□□□□□ -0.85
ARHGEF1-202ENST00000347545 WIPF1O43516 503 aa9.75□□□□□ -0.85
ARHGEF1-202ENST00000347545 IGLV6-57P01721 117 aa9.75□□□□□ -0.85
ARHGEF1-202ENST00000347545 C6orf48Q9UBA6 75 aa9.75□□□□□ -0.85
ARHGEF1-202ENST00000347545 TMEM256-PLSCR3K7ERE1 68 aa9.74□□□□□ -0.85
ARHGEF1-202ENST00000347545 S100A7L2Q5SY68 101 aa9.74□□□□□ -0.85
ARHGEF1-202ENST00000347545 HRCT1Q6UXD1 115 aa9.74□□□□□ -0.85
ARHGEF1-202ENST00000347545 SERP2Q8N6R1 65 aa9.74□□□□□ -0.85
ARHGEF1-202ENST00000347545 TRAV23DV6A0A075B6W5 121 aa9.73□□□□□ -0.85
ARHGEF1-202ENST00000347545 RETNQ9HD89 108 aa9.73□□□□□ -0.85
ARHGEF1-202ENST00000347545 GVQW2A0A096LPI5 108 aaPredicted RBP9.72□□□□□ -0.85
ARHGEF1-202ENST00000347545 JMJD7-PLA2G4BH0Y9G9 81 aa9.72□□□□□ -0.85
ARHGEF1-202ENST00000347545 UPK3BQ9BT76 320 aa9.72□□□□□ -0.85
ARHGEF1-202ENST00000347545 WFDC10BQ8IUB3 73 aa9.71□□□□□ -0.85
ARHGEF1-202ENST00000347545 KRTAP26-1Q6PEX3 210 aa9.71□□□□□ -0.85
ARHGEF1-202ENST00000347545 MUC7Q8TAX7 377 aa9.71□□□□□ -0.85
ARHGEF1-202ENST00000347545 XAGE1AQ9HD64 81 aa9.7□□□□□ -0.86
ARHGEF1-202ENST00000347545 FAM19A1Q7Z5A9 133 aa9.7□□□□□ -0.86
ARHGEF1-202ENST00000347545 TRBV10-3A0A0K0K1G6 114 aa9.69□□□□□ -0.86
ARHGEF1-202ENST00000347545 TMEM258P61165 79 aa9.69□□□□□ -0.86
ARHGEF1-202ENST00000347545 KRTAP10-11P60412 298 aa9.69□□□□□ -0.86
ARHGEF1-202ENST00000347545 RPS28P62857 69 aaKnown RBP9.69□□□□□ -0.86
ARHGEF1-202ENST00000347545 M0R2N4 97 aa9.68□□□□□ -0.86
ARHGEF1-202ENST00000347545 GHRHP01286 108 aa9.67□□□□□ -0.86
ARHGEF1-202ENST00000347545 HIGD2BQ4VC39 106 aa9.67□□□□□ -0.86
ARHGEF1-202ENST00000347545 TENM3Q9P273 2699 aa9.67□□□□□ -0.86
ARHGEF1-202ENST00000347545 KPRPQ5T749 579 aaPredicted RBP9.67□□□□□ -0.86
ARHGEF1-202ENST00000347545 OXLD1Q5BKU9 147 aa9.67□□□□□ -0.86
ARHGEF1-202ENST00000347545 Q6ZQT0 140 aa9.67□□□□□ -0.86
ARHGEF1-202ENST00000347545 C20orf197Q8N268 126 aa9.66□□□□□ -0.86
ARHGEF1-202ENST00000347545 DNAH3Q8TD57 4116 aa9.66□□□□□ -0.86
ARHGEF1-202ENST00000347545 ZNF561-AS1K7EIQ3 104 aa9.66□□□□□ -0.86
ARHGEF1-202ENST00000347545 Q6ZTC4 211 aa9.65□□□□□ -0.86
ARHGEF1-202ENST00000347545 C15orf56Q8N910 161 aa9.65□□□□□ -0.86
ARHGEF1-202ENST00000347545 Q6ZQY7 126 aa9.65□□□□□ -0.86
ARHGEF1-202ENST00000347545 Q5XG85 94 aa9.64□□□□□ -0.87
ARHGEF1-202ENST00000347545 LOC110117498A0A087WWA1 95 aa9.64□□□□□ -0.87
ARHGEF1-202ENST00000347545 VPREB1P12018 145 aa9.63□□□□□ -0.87
ARHGEF1-202ENST00000347545 H3BNG1 76 aa9.63□□□□□ -0.87
ARHGEF1-202ENST00000347545 RBM3P98179 157 aaKnown RBP9.63□□□□□ -0.87
ARHGEF1-202ENST00000347545 Q6ZRU5 148 aa9.62□□□□□ -0.87
ARHGEF1-202ENST00000347545 ESRGQ1W209 222 aa9.62□□□□□ -0.87
ARHGEF1-202ENST00000347545 DIRC1Q969H9 104 aa9.62□□□□□ -0.87
ARHGEF1-202ENST00000347545 CAMK2N2Q96S95 79 aa9.62□□□□□ -0.87
ARHGEF1-202ENST00000347545 ZNF73O43830 326 aaPredicted RBP9.61□□□□□ -0.87
ARHGEF1-202ENST00000347545 LAMTOR3Q9UHA4 124 aa9.61□□□□□ -0.87
ARHGEF1-202ENST00000347545 ATP5EP2Q5VTU8 51 aa9.6□□□□□ -0.87
ARHGEF1-202ENST00000347545 ELOF1P60002 83 aaKnown RBP9.59□□□□□ -0.87
ARHGEF1-202ENST00000347545 EGFEM1PQ0D2K5 195 aa9.59□□□□□ -0.87
ARHGEF1-202ENST00000347545 DNAH1Q9P2D7 4330 aa9.58□□□□□ -0.88
ARHGEF1-202ENST00000347545 COX7BP24311 80 aa9.58□□□□□ -0.88
ARHGEF1-202ENST00000347545 UBL5Q9BZL1 73 aa9.57□□□□□ -0.88
ARHGEF1-202ENST00000347545 SNURFQ9Y675 71 aa9.57□□□□□ -0.88
ARHGEF1-202ENST00000347545 FBN1P35555 2871 aaKnown RBP9.56□□□□□ -0.88
ARHGEF1-202ENST00000347545 NDUFC2-KCTD14E9PQ53 114 aa9.56□□□□□ -0.88
ARHGEF1-202ENST00000347545 Q6ZRP5 223 aa9.56□□□□□ -0.88
ARHGEF1-202ENST00000347545 M0R378 163 aa9.55□□□□□ -0.88
ARHGEF1-202ENST00000347545 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.55□□□□□ -0.88
ARHGEF1-202ENST00000347545 TRBV7-6A0A0J9YX20 115 aa9.54□□□□□ -0.88
ARHGEF1-202ENST00000347545 TRBV7-4A0A0J9YYF1 115 aa9.54□□□□□ -0.88
ARHGEF1-202ENST00000347545 Q6ZVQ6 151 aa9.54□□□□□ -0.88
ARHGEF1-202ENST00000347545 HAMPP81172 84 aa9.54□□□□□ -0.88
ARHGEF1-202ENST00000347545 LINC00528Q8N1L1 170 aa9.54□□□□□ -0.88
ARHGEF1-202ENST00000347545 LINC01547P58512 204 aaPredicted RBP9.53□□□□□ -0.88
ARHGEF1-202ENST00000347545 LINC01556Q5JQF7 62 aa9.53□□□□□ -0.88
ARHGEF1-202ENST00000347545 FAM236DA0A1B0GTK5 79 aa9.53□□□□□ -0.88
ARHGEF1-202ENST00000347545 FAM236CP0DP71 79 aa9.53□□□□□ -0.88
ARHGEF1-202ENST00000347545 C1orf43Q9BWL3 253 aa9.52□□□□□ -0.89
ARHGEF1-202ENST00000347545 TRAV10A0A0B4J240 114 aa9.52□□□□□ -0.89
ARHGEF1-202ENST00000347545 IGKV2D-24A0A075B6R9 120 aa9.51□□□□□ -0.89
ARHGEF1-202ENST00000347545 DEFB131BA0A096LNP1 70 aa9.51□□□□□ -0.89
ARHGEF1-202ENST00000347545 H3BQ85 93 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms