RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 NPC2P61916 151 aa6.29□□□□□ -1.4
ATG4A-202ENST00000345734 ATXN8Q156A1 80 aa6.29□□□□□ -1.4
ATG4A-202ENST00000345734 C11orf45Q8TAV5 145 aa6.29□□□□□ -1.4
ATG4A-202ENST00000345734 A0A087WZ39 114 aa6.29□□□□□ -1.4
ATG4A-202ENST00000345734 PRSS2P07478 247 aa6.29□□□□□ -1.4
ATG4A-202ENST00000345734 SS18Q15532 418 aa6.29□□□□□ -1.4
ATG4A-202ENST00000345734 KRTAP19-1Q8IUB9 90 aa6.29□□□□□ -1.4
ATG4A-202ENST00000345734 TOMM7Q9P0U1 55 aa6.29□□□□□ -1.4
ATG4A-202ENST00000345734 DNHD1Q96M86 4753 aa6.28□□□□□ -1.4
ATG4A-202ENST00000345734 A0A0U1RRA0 63 aa6.28□□□□□ -1.4
ATG4A-202ENST00000345734 MIAQ16674 131 aa6.28□□□□□ -1.4
ATG4A-202ENST00000345734 LINC00643Q86TS7 51 aa6.28□□□□□ -1.4
ATG4A-202ENST00000345734 COX7B2Q8TF08 81 aa6.28□□□□□ -1.4
ATG4A-202ENST00000345734 TM2D3Q9BRN9 247 aa6.28□□□□□ -1.4
ATG4A-202ENST00000345734 IGLV10-54A0A075B6I4 117 aa6.28□□□□□ -1.4
ATG4A-202ENST00000345734 DEFB131BA0A096LNP1 70 aa6.28□□□□□ -1.4
ATG4A-202ENST00000345734 PFN2P35080 140 aa6.28□□□□□ -1.4
ATG4A-202ENST00000345734 REG3AQ06141 175 aa6.28□□□□□ -1.4
ATG4A-202ENST00000345734 C2orf48Q96LS8 159 aa6.28□□□□□ -1.4
ATG4A-202ENST00000345734 DYNC2H1Q8NCM8 4307 aaKnown RBP6.27□□□□□ -1.41
ATG4A-202ENST00000345734 DNAH1Q9P2D7 4330 aa6.27□□□□□ -1.41
ATG4A-202ENST00000345734 H3BNG1 76 aa6.27□□□□□ -1.41
ATG4A-202ENST00000345734 TIMM17BO60830 172 aa6.27□□□□□ -1.41
ATG4A-202ENST00000345734 HIST1H4AP62805 103 aaKnown RBP6.27□□□□□ -1.41
ATG4A-202ENST00000345734 LINC01620Q4KN68 170 aa6.27□□□□□ -1.41
ATG4A-202ENST00000345734 C1orf195Q5TG92 126 aa6.27□□□□□ -1.41
ATG4A-202ENST00000345734 PRO1854Q9UHT4 67 aa6.27□□□□□ -1.41
ATG4A-202ENST00000345734 KRTAP10-2P60368 255 aa6.26□□□□□ -1.41
ATG4A-202ENST00000345734 SFTA2Q6UW10 78 aa6.26□□□□□ -1.41
ATG4A-202ENST00000345734 Q8N1X5 172 aa6.26□□□□□ -1.41
ATG4A-202ENST00000345734 CHCHD10Q8WYQ3 142 aaPredicted RBP6.26□□□□□ -1.41
ATG4A-202ENST00000345734 LYSTQ99698 3801 aa6.26□□□□□ -1.41
ATG4A-202ENST00000345734 USP17L23D6RBM5 183 aa6.26□□□□□ -1.41
ATG4A-202ENST00000345734 IGHV3-33P01772 117 aa6.26□□□□□ -1.41
ATG4A-202ENST00000345734 CIRBPQ14011 172 aaKnown RBP6.26□□□□□ -1.41
ATG4A-202ENST00000345734 WFDC10BQ8IUB3 73 aa6.26□□□□□ -1.41
ATG4A-202ENST00000345734 KLK12Q9UKR0 248 aa6.26□□□□□ -1.41
ATG4A-202ENST00000345734 STAB2Q8WWQ8 2551 aa6.25□□□□□ -1.41
ATG4A-202ENST00000345734 ESRGQ1W209 222 aa6.25□□□□□ -1.41
ATG4A-202ENST00000345734 PRKDCP78527 4128 aaKnown RBP6.25□□□□□ -1.41
ATG4A-202ENST00000345734 TEX49A0A1B0GTD5 131 aa6.25□□□□□ -1.41
ATG4A-202ENST00000345734 OXTP01178 125 aa6.25□□□□□ -1.41
ATG4A-202ENST00000345734 CD164L2Q6UWJ8 174 aa6.25□□□□□ -1.41
ATG4A-202ENST00000345734 LINC00336Q6ZUF6 198 aa6.25□□□□□ -1.41
ATG4A-202ENST00000345734 A0A0B4J2C4 111 aa6.24□□□□□ -1.41
ATG4A-202ENST00000345734 EPM2AB3EWF7 344 aa6.24□□□□□ -1.41
ATG4A-202ENST00000345734 SOSTDC1Q6X4U4 206 aa6.24□□□□□ -1.41
ATG4A-202ENST00000345734 LINC00308Q8TCZ7 52 aa6.24□□□□□ -1.41
ATG4A-202ENST00000345734 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.23□□□□□ -1.41
ATG4A-202ENST00000345734 hADV29S1A0JD25 119 aa6.23□□□□□ -1.41
ATG4A-202ENST00000345734 H7C2G1 150 aa6.23□□□□□ -1.41
ATG4A-202ENST00000345734 ENHOQ6UWT2 76 aa6.23□□□□□ -1.41
ATG4A-202ENST00000345734 SDIM1Q6ZPB5 146 aa6.23□□□□□ -1.41
ATG4A-202ENST00000345734 PLECQ15149 4684 aaKnown RBP6.23□□□□□ -1.41
ATG4A-202ENST00000345734 COX7A2LO14548 114 aa6.23□□□□□ -1.41
ATG4A-202ENST00000345734 PRR34Q9NV39 138 aa6.23□□□□□ -1.41
ATG4A-202ENST00000345734 PKIGQ9Y2B9 76 aa6.23□□□□□ -1.41
ATG4A-202ENST00000345734 NDUFC2O95298 119 aa6.22□□□□□ -1.41
ATG4A-202ENST00000345734 C2orf82Q6UX34 121 aa6.22□□□□□ -1.41
ATG4A-202ENST00000345734 LINC01561Q8N1V8 128 aa6.22□□□□□ -1.41
ATG4A-202ENST00000345734 TRAV10A0A0B4J240 114 aa6.22□□□□□ -1.41
ATG4A-202ENST00000345734 TRBV30A0A0K0K1B3 111 aa6.22□□□□□ -1.41
ATG4A-202ENST00000345734 Q8IZM0 81 aa6.22□□□□□ -1.41
ATG4A-202ENST00000345734 SERP2Q8N6R1 65 aa6.22□□□□□ -1.41
ATG4A-202ENST00000345734 DSCR8Q96T75 97 aa6.22□□□□□ -1.41
ATG4A-202ENST00000345734 DNAH7Q8WXX0 4024 aa6.22□□□□□ -1.41
ATG4A-202ENST00000345734 CSMD3Q7Z407 3707 aa6.21□□□□□ -1.42
ATG4A-202ENST00000345734 LINC00158P58513 81 aa6.21□□□□□ -1.42
ATG4A-202ENST00000345734 KIAA0087Q14695 138 aa6.21□□□□□ -1.42
ATG4A-202ENST00000345734 MIR7-3HGQ8N6C7 128 aa6.21□□□□□ -1.42
ATG4A-202ENST00000345734 UPK3BQ9BT76 320 aa6.21□□□□□ -1.42
ATG4A-202ENST00000345734 FAM236DA0A1B0GTK5 79 aa6.2□□□□□ -1.42
ATG4A-202ENST00000345734 FAM236CP0DP71 79 aa6.2□□□□□ -1.42
ATG4A-202ENST00000345734 COPS9Q8WXC6 57 aa6.2□□□□□ -1.42
ATG4A-202ENST00000345734 DNAH10Q8IVF4 4471 aa6.2□□□□□ -1.42
ATG4A-202ENST00000345734 CRPP02741 224 aa6.2□□□□□ -1.42
ATG4A-202ENST00000345734 RPL18AQ02543 176 aaKnown RBP6.2□□□□□ -1.42
ATG4A-202ENST00000345734 Q1RN00 199 aa6.2□□□□□ -1.42
ATG4A-202ENST00000345734 SERP1Q9Y6X1 66 aa6.2□□□□□ -1.42
ATG4A-202ENST00000345734 IBA57-AS1B1ANH7 110 aa6.19□□□□□ -1.42
ATG4A-202ENST00000345734 LCE4AQ5TA78 99 aa6.19□□□□□ -1.42
ATG4A-202ENST00000345734 C6orf223Q8N319 242 aa6.19□□□□□ -1.42
ATG4A-202ENST00000345734 LINC01556Q5JQF7 62 aa6.17□□□□□ -1.42
ATG4A-202ENST00000345734 SMIM26A0A096LP01 95 aa6.17□□□□□ -1.42
ATG4A-202ENST00000345734 COX6CP09669 75 aa6.17□□□□□ -1.42
ATG4A-202ENST00000345734 CCL18P55774 89 aa6.17□□□□□ -1.42
ATG4A-202ENST00000345734 SPAG11BQ08648 103 aa6.17□□□□□ -1.42
ATG4A-202ENST00000345734 C9orf116Q5BN46 136 aaPredicted RBP6.17□□□□□ -1.42
ATG4A-202ENST00000345734 KRTAP26-1Q6PEX3 210 aa6.17□□□□□ -1.42
ATG4A-202ENST00000345734 LINC00588Q9Y4M8 146 aa6.17□□□□□ -1.42
ATG4A-202ENST00000345734 TENM2Q9NT68 2774 aa6.16□□□□□ -1.42
ATG4A-202ENST00000345734 C10orf25Q5T742 122 aa6.16□□□□□ -1.42
ATG4A-202ENST00000345734 UNQ6190/PRO20217Q6UXQ8 127 aa6.16□□□□□ -1.42
ATG4A-202ENST00000345734 B9D2Q9BPU9 175 aa6.16□□□□□ -1.42
ATG4A-202ENST00000345734 SND1-IT1Q9HBX3 110 aa6.16□□□□□ -1.42
ATG4A-202ENST00000345734 STARD9Q9P2P6 4700 aa6.15□□□□□ -1.42
ATG4A-202ENST00000345734 IGKV2-28A0A075B6P5 120 aa6.15□□□□□ -1.42
ATG4A-202ENST00000345734 IGKV2D-28P01615 120 aa6.15□□□□□ -1.42
ATG4A-202ENST00000345734 DNAH10OSP0CZ25 163 aa6.15□□□□□ -1.42
ATG4A-202ENST00000345734 FAM19A1Q7Z5A9 133 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 366.7 ms