RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 F8WDY8 70 aa13.19□□□□□ -0.3
RTN1-202ENST00000342503 K7ERU9 68 aa13.19□□□□□ -0.3
RTN1-202ENST00000342503 NCR3O14931 201 aa13.18□□□□□ -0.3
RTN1-202ENST00000342503 TRBV10-2A0A0K0K1G8 114 aa13.17□□□□□ -0.3
RTN1-202ENST00000342503 NUPR2A6NF83 97 aa13.16□□□□□ -0.3
RTN1-202ENST00000342503 PRKDCP78527 4128 aaKnown RBP13.16□□□□□ -0.3
RTN1-202ENST00000342503 USP17L23D6RBM5 183 aa13.16□□□□□ -0.3
RTN1-202ENST00000342503 SYCNQ0VAF6 134 aa13.16□□□□□ -0.3
RTN1-202ENST00000342503 M0QXV9 152 aa13.15□□□□□ -0.3
RTN1-202ENST00000342503 KRTAP1-5Q9BYS1 174 aa13.15□□□□□ -0.3
RTN1-202ENST00000342503 XAGE1AQ9HD64 81 aa13.15□□□□□ -0.3
RTN1-202ENST00000342503 ANKRD29Q8N6D5 301 aa13.14□□□□□ -0.31
RTN1-202ENST00000342503 FAM218AQ96MZ4 157 aa13.14□□□□□ -0.31
RTN1-202ENST00000342503 LYSTQ99698 3801 aa13.14□□□□□ -0.31
RTN1-202ENST00000342503 CSMD3Q7Z407 3707 aa13.14□□□□□ -0.31
RTN1-202ENST00000342503 DNAH7Q8WXX0 4024 aa13.13□□□□□ -0.31
RTN1-202ENST00000342503 NDUFC2-KCTD14E9PQ53 114 aa13.13□□□□□ -0.31
RTN1-202ENST00000342503 RNF151Q2KHN1 245 aa13.13□□□□□ -0.31
RTN1-202ENST00000342503 TEN1Q86WV5 123 aa13.13□□□□□ -0.31
RTN1-202ENST00000342503 LINC01600Q96MT4 127 aa13.13□□□□□ -0.31
RTN1-202ENST00000342503 TMEM126AQ9H061 195 aa13.13□□□□□ -0.31
RTN1-202ENST00000342503 KRTAP21-3Q3LHN1 58 aa13.12□□□□□ -0.31
RTN1-202ENST00000342503 PLECQ15149 4684 aaKnown RBP13.11□□□□□ -0.31
RTN1-202ENST00000342503 TRACP01848 142 aa13.1□□□□□ -0.31
RTN1-202ENST00000342503 CARD19Q96LW7 228 aa13.1□□□□□ -0.31
RTN1-202ENST00000342503 H0YGX0 51 aa13.1□□□□□ -0.31
RTN1-202ENST00000342503 S100A7L2Q5SY68 101 aa13.1□□□□□ -0.31
RTN1-202ENST00000342503 H3BT86 120 aa13.09□□□□□ -0.31
RTN1-202ENST00000342503 LECT2O14960 151 aa13.09□□□□□ -0.31
RTN1-202ENST00000342503 SLPIP03973 132 aa13.09□□□□□ -0.31
RTN1-202ENST00000342503 RPL18AQ02543 176 aaKnown RBP13.09□□□□□ -0.31
RTN1-202ENST00000342503 GAGE2EQ4V326 116 aa13.09□□□□□ -0.31
RTN1-202ENST00000342503 Q6ZRP5 223 aa13.09□□□□□ -0.31
RTN1-202ENST00000342503 GAGE2DQ9UEU5 116 aa13.09□□□□□ -0.31
RTN1-202ENST00000342503 MEGF8Q7Z7M0 2845 aa13.08□□□□□ -0.32
RTN1-202ENST00000342503 PPDPFLQ8WWR9 84 aa13.08□□□□□ -0.32
RTN1-202ENST00000342503 A0A087WYN8 130 aa13.07□□□□□ -0.32
RTN1-202ENST00000342503 J3QR89 54 aa13.05□□□□□ -0.32
RTN1-202ENST00000342503 IGLV6-57P01721 117 aa13.05□□□□□ -0.32
RTN1-202ENST00000342503 VPREB1P12018 145 aa13.05□□□□□ -0.32
RTN1-202ENST00000342503 STARD9Q9P2P6 4700 aa13.04□□□□□ -0.32
RTN1-202ENST00000342503 TLX1NBP0CAT3 122 aa13.03□□□□□ -0.32
RTN1-202ENST00000342503 C9orf129Q5T035 196 aaKnown RBP13.02□□□□□ -0.32
RTN1-202ENST00000342503 VPS25Q9BRG1 176 aa13.02□□□□□ -0.32
RTN1-202ENST00000342503 C6orf99Q4VX62 202 aa13.02□□□□□ -0.33
RTN1-202ENST00000342503 TRBV10-3A0A0K0K1G6 114 aa13.01□□□□□ -0.33
RTN1-202ENST00000342503 PSCAO43653 123 aa13.01□□□□□ -0.33
RTN1-202ENST00000342503 DNAH10Q8IVF4 4471 aa13□□□□□ -0.33
RTN1-202ENST00000342503 BAALC-AS2P0C853 105 aa13□□□□□ -0.33
RTN1-202ENST00000342503 NBDYA0A0U1RRE5 68 aa12.99□□□□□ -0.33
RTN1-202ENST00000342503 TEX49A0A1B0GTD5 131 aa12.99□□□□□ -0.33
RTN1-202ENST00000342503 M0R378 163 aa12.99□□□□□ -0.33
RTN1-202ENST00000342503 DNAL4O96015 105 aa12.99□□□□□ -0.33
RTN1-202ENST00000342503 TTC32Q5I0X7 151 aa12.98□□□□□ -0.33
RTN1-202ENST00000342503 TRAV23DV6A0A075B6W5 121 aa12.96□□□□□ -0.33
RTN1-202ENST00000342503 C22orf24Q9Y442 160 aa12.95□□□□□ -0.34
RTN1-202ENST00000342503 VPS13DQ5THJ4 4388 aa12.95□□□□□ -0.34
RTN1-202ENST00000342503 A0A1B0GX51 115 aa12.94□□□□□ -0.34
RTN1-202ENST00000342503 SERTAD4-AS1Q5TG53 156 aa12.94□□□□□ -0.34
RTN1-202ENST00000342503 GAGE2BQ13066 116 aa12.93□□□□□ -0.34
RTN1-202ENST00000342503 Q8N814 137 aa12.93□□□□□ -0.34
RTN1-202ENST00000342503 LOC107984640A0A0U1RRK4 108 aa12.93□□□□□ -0.34
RTN1-202ENST00000342503 LINC00167Q96N53 147 aa12.93□□□□□ -0.34
RTN1-202ENST00000342503 PLA2G2DQ9UNK4 145 aa12.93□□□□□ -0.34
RTN1-202ENST00000342503 TENM2Q9NT68 2774 aa12.92□□□□□ -0.34
RTN1-202ENST00000342503 LINC00575Q6W349 94 aa12.91□□□□□ -0.34
RTN1-202ENST00000342503 DIRC1Q969H9 104 aa12.91□□□□□ -0.34
RTN1-202ENST00000342503 CNBPP62633 177 aaKnown RBP12.91□□□□□ -0.34
RTN1-202ENST00000342503 NKAPP1Q8N9T2 125 aa12.91□□□□□ -0.34
RTN1-202ENST00000342503 ZNF73O43830 326 aaPredicted RBP12.9□□□□□ -0.34
RTN1-202ENST00000342503 C14orf177Q52M58 125 aa12.9□□□□□ -0.34
RTN1-202ENST00000342503 FAM168BA1KXE4 195 aa12.89□□□□□ -0.35
RTN1-202ENST00000342503 ORMDL1Q9P0S3 153 aa12.89□□□□□ -0.35
RTN1-202ENST00000342503 M0R2N4 97 aa12.88□□□□□ -0.35
RTN1-202ENST00000342503 Q6ZRN7 208 aaPredicted RBP12.88□□□□□ -0.35
RTN1-202ENST00000342503 C7orf33Q8WU49 177 aa12.88□□□□□ -0.35
RTN1-202ENST00000342503 IGLV5-37A0A075B6J1 123 aa12.87□□□□□ -0.35
RTN1-202ENST00000342503 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.87□□□□□ -0.35
RTN1-202ENST00000342503 LRCOL1A6NCL2 159 aa12.87□□□□□ -0.35
RTN1-202ENST00000342503 SNCGO76070 127 aa12.87□□□□□ -0.35
RTN1-202ENST00000342503 CBY1Q9Y3M2 126 aa12.87□□□□□ -0.35
RTN1-202ENST00000342503 hADV29S1A0JD25 119 aa12.86□□□□□ -0.35
RTN1-202ENST00000342503 COX7BP24311 80 aa12.86□□□□□ -0.35
RTN1-202ENST00000342503 KRTAP7-1Q8IUC3 87 aa12.85□□□□□ -0.35
RTN1-202ENST00000342503 TRBV7-6A0A0J9YX20 115 aa12.85□□□□□ -0.35
RTN1-202ENST00000342503 ELOF1P60002 83 aaKnown RBP12.84□□□□□ -0.35
RTN1-202ENST00000342503 CDIP1Q9H305 208 aa12.83□□□□□ -0.36
RTN1-202ENST00000342503 FAM19A5Q7Z5A7 132 aaPredicted RBP12.82□□□□□ -0.36
RTN1-202ENST00000342503 KCNQ1DNQ9H478 68 aa12.82□□□□□ -0.36
RTN1-202ENST00000342503 A0A096LNI7 61 aa12.82□□□□□ -0.36
RTN1-202ENST00000342503 FBN3Q75N90 2809 aa12.8□□□□□ -0.36
RTN1-202ENST00000342503 C16orf90A8MZG2 172 aa12.79□□□□□ -0.36
RTN1-202ENST00000342503 RPL37AP8A6NKH3 93 aa12.79□□□□□ -0.36
RTN1-202ENST00000342503 TMEM256-PLSCR3K7ERE1 68 aa12.79□□□□□ -0.36
RTN1-202ENST00000342503 IGKV2-24A0A0C4DH68 120 aa12.78□□□□□ -0.36
RTN1-202ENST00000342503 INAFM2P0DMQ5 153 aa12.78□□□□□ -0.36
RTN1-202ENST00000342503 Q6ZR54 194 aa12.78□□□□□ -0.36
RTN1-202ENST00000342503 OBSCN-AS1Q96MR7 158 aa12.78□□□□□ -0.36
RTN1-202ENST00000342503 IGLV1-50A0A075B6I6 118 aa12.77□□□□□ -0.36
RTN1-202ENST00000342503 LINC00528Q8N1L1 170 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms