RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 C10orf25Q5T742 122 aa13.6□□□□□ -0.23
SPG7-202ENST00000341316 LINC00846Q9NV44 126 aa13.6□□□□□ -0.23
SPG7-202ENST00000341316 ORMDL1Q9P0S3 153 aa13.59□□□□□ -0.23
SPG7-202ENST00000341316 NOTCH1P46531 2555 aa13.59□□□□□ -0.23
SPG7-202ENST00000341316 COX17Q14061 63 aa13.59□□□□□ -0.23
SPG7-202ENST00000341316 C9orf153Q5TBE3 101 aa13.59□□□□□ -0.23
SPG7-202ENST00000341316 Q8NDZ9 215 aa13.59□□□□□ -0.23
SPG7-202ENST00000341316 NANOS2P60321 138 aaKnown RBP13.57□□□□□ -0.24
SPG7-202ENST00000341316 UNQ6190/PRO20217Q6UXQ8 127 aa13.57□□□□□ -0.24
SPG7-202ENST00000341316 TMEM126AQ9H061 195 aa13.57□□□□□ -0.24
SPG7-202ENST00000341316 IGKV3D-7A0A0C4DH55 119 aa13.57□□□□□ -0.24
SPG7-202ENST00000341316 UQCRQO14949 82 aa13.57□□□□□ -0.24
SPG7-202ENST00000341316 EGFEM1PQ0D2K5 195 aa13.57□□□□□ -0.24
SPG7-202ENST00000341316 Q6ZTC4 211 aa13.57□□□□□ -0.24
SPG7-202ENST00000341316 SPAG11BQ08648 103 aa13.56□□□□□ -0.24
SPG7-202ENST00000341316 HIST1H4AP62805 103 aaKnown RBP13.56□□□□□ -0.24
SPG7-202ENST00000341316 KPRPQ5T749 579 aaPredicted RBP13.56□□□□□ -0.24
SPG7-202ENST00000341316 Q6JHZ5 121 aa13.55□□□□□ -0.24
SPG7-202ENST00000341316 WFDC10BQ8IUB3 73 aa13.55□□□□□ -0.24
SPG7-202ENST00000341316 LINC00167Q96N53 147 aa13.53□□□□□ -0.24
SPG7-202ENST00000341316 DNAH3Q8TD57 4116 aa13.53□□□□□ -0.24
SPG7-202ENST00000341316 CYSRT1A8MQ03 144 aa13.53□□□□□ -0.24
SPG7-202ENST00000341316 NDUFC2O95298 119 aa13.53□□□□□ -0.24
SPG7-202ENST00000341316 COL6A5A8TX70 2615 aa13.53□□□□□ -0.24
SPG7-202ENST00000341316 COX7CP15954 63 aa13.51□□□□□ -0.25
SPG7-202ENST00000341316 Q8N814 137 aa13.51□□□□□ -0.25
SPG7-202ENST00000341316 C2orf48Q96LS8 159 aa13.51□□□□□ -0.25
SPG7-202ENST00000341316 ATOX1O00244 68 aa13.51□□□□□ -0.25
SPG7-202ENST00000341316 H3BNG1 76 aa13.5□□□□□ -0.25
SPG7-202ENST00000341316 A0A0J9YWU9 116 aa13.49□□□□□ -0.25
SPG7-202ENST00000341316 A0A1B0GX51 115 aa13.49□□□□□ -0.25
SPG7-202ENST00000341316 CCKP06307 115 aa13.49□□□□□ -0.25
SPG7-202ENST00000341316 A0A087WVE0 104 aa13.48□□□□□ -0.25
SPG7-202ENST00000341316 RPL18AQ02543 176 aaKnown RBP13.48□□□□□ -0.25
SPG7-202ENST00000341316 ESRGQ1W209 222 aa13.47□□□□□ -0.25
SPG7-202ENST00000341316 NBEAL1Q6ZS30 2694 aa13.45□□□□□ -0.26
SPG7-202ENST00000341316 JMJD7-PLA2G4BH0Y9G9 81 aa13.45□□□□□ -0.26
SPG7-202ENST00000341316 KRTAP26-1Q6PEX3 210 aa13.45□□□□□ -0.26
SPG7-202ENST00000341316 TMEM256-PLSCR3K7ERE1 68 aa13.44□□□□□ -0.26
SPG7-202ENST00000341316 C6orf99Q4VX62 202 aa13.44□□□□□ -0.26
SPG7-202ENST00000341316 C6orf48Q9UBA6 75 aa13.44□□□□□ -0.26
SPG7-202ENST00000341316 GVQW2A0A096LPI5 108 aaPredicted RBP13.42□□□□□ -0.26
SPG7-202ENST00000341316 CRYGAP11844 174 aa13.42□□□□□ -0.26
SPG7-202ENST00000341316 BAHCC1Q9P281 2608 aa13.41□□□□□ -0.26
SPG7-202ENST00000341316 HIGD2BQ4VC39 106 aa13.41□□□□□ -0.26
SPG7-202ENST00000341316 S100A7L2Q5SY68 101 aa13.41□□□□□ -0.26
SPG7-202ENST00000341316 DEFB131BA0A096LNP1 70 aa13.4□□□□□ -0.26
SPG7-202ENST00000341316 PRB2P02812 416 aaPredicted RBP13.4□□□□□ -0.26
SPG7-202ENST00000341316 C11orf45Q8TAV5 145 aa13.4□□□□□ -0.26
SPG7-202ENST00000341316 hADV29S1A0JD25 119 aa13.39□□□□□ -0.27
SPG7-202ENST00000341316 MUC7Q8TAX7 377 aa13.39□□□□□ -0.27
SPG7-202ENST00000341316 USP17L23D6RBM5 183 aa13.39□□□□□ -0.27
SPG7-202ENST00000341316 XAGE1AQ9HD64 81 aa13.39□□□□□ -0.27
SPG7-202ENST00000341316 LINC00575Q6W349 94 aa13.38□□□□□ -0.27
SPG7-202ENST00000341316 CYSTM1Q9H1C7 97 aa13.37□□□□□ -0.27
SPG7-202ENST00000341316 SERP2Q8N6R1 65 aa13.37□□□□□ -0.27
SPG7-202ENST00000341316 C15orf56Q8N910 161 aa13.36□□□□□ -0.27
SPG7-202ENST00000341316 ZNF561-AS1K7EIQ3 104 aa13.36□□□□□ -0.27
SPG7-202ENST00000341316 IGLV6-57P01721 117 aa13.36□□□□□ -0.27
SPG7-202ENST00000341316 CAMK2N2Q96S95 79 aa13.34□□□□□ -0.27
SPG7-202ENST00000341316 HUWE1Q7Z6Z7 4374 aaKnown RBP13.33□□□□□ -0.27
SPG7-202ENST00000341316 LINC01556Q5JQF7 62 aa13.33□□□□□ -0.28
SPG7-202ENST00000341316 ATP5EP2Q5VTU8 51 aa13.33□□□□□ -0.28
SPG7-202ENST00000341316 Q6ZRU5 148 aa13.33□□□□□ -0.28
SPG7-202ENST00000341316 UPK3BQ9BT76 320 aa13.32□□□□□ -0.28
SPG7-202ENST00000341316 FAM19A1Q7Z5A9 133 aa13.31□□□□□ -0.28
SPG7-202ENST00000341316 TRBV10-3A0A0K0K1G6 114 aa13.3□□□□□ -0.28
SPG7-202ENST00000341316 C1orf43Q9BWL3 253 aa13.3□□□□□ -0.28
SPG7-202ENST00000341316 UBL5Q9BZL1 73 aa13.3□□□□□ -0.28
SPG7-202ENST00000341316 MGAM2Q2M2H8 2515 aa13.3□□□□□ -0.28
SPG7-202ENST00000341316 LOC107984640A0A0U1RRK4 108 aa13.29□□□□□ -0.28
SPG7-202ENST00000341316 RBM3P98179 157 aaKnown RBP13.29□□□□□ -0.28
SPG7-202ENST00000341316 IGKV2D-24A0A075B6R9 120 aa13.29□□□□□ -0.28
SPG7-202ENST00000341316 Q6ZQT0 140 aa13.29□□□□□ -0.28
SPG7-202ENST00000341316 LAMTOR3Q9UHA4 124 aa13.29□□□□□ -0.28
SPG7-202ENST00000341316 TRAV23DV6A0A075B6W5 121 aa13.27□□□□□ -0.28
SPG7-202ENST00000341316 M0R2N4 97 aa13.26□□□□□ -0.29
SPG7-202ENST00000341316 GHRHP01286 108 aa13.25□□□□□ -0.29
SPG7-202ENST00000341316 VPREB1P12018 145 aa13.25□□□□□ -0.29
SPG7-202ENST00000341316 Q6ZQY7 126 aa13.25□□□□□ -0.29
SPG7-202ENST00000341316 LOC110117498A0A087WWA1 95 aa13.25□□□□□ -0.29
SPG7-202ENST00000341316 J3KT08 172 aa13.24□□□□□ -0.29
SPG7-202ENST00000341316 DNAH10OSP0CZ25 163 aa13.24□□□□□ -0.29
SPG7-202ENST00000341316 MRAPQ8TCY5 172 aa13.24□□□□□ -0.29
SPG7-202ENST00000341316 NDUFC2-KCTD14E9PQ53 114 aa13.23□□□□□ -0.29
SPG7-202ENST00000341316 K7EIL1 84 aa13.23□□□□□ -0.29
SPG7-202ENST00000341316 TM2D3Q9BRN9 247 aa13.23□□□□□ -0.29
SPG7-202ENST00000341316 Q6ZRP5 223 aa13.22□□□□□ -0.29
SPG7-202ENST00000341316 LINC00588Q9Y4M8 146 aa13.22□□□□□ -0.29
SPG7-202ENST00000341316 TRAV10A0A0B4J240 114 aa13.22□□□□□ -0.29
SPG7-202ENST00000341316 TMEM258P61165 79 aa13.22□□□□□ -0.29
SPG7-202ENST00000341316 DIRC1Q969H9 104 aa13.2□□□□□ -0.3
SPG7-202ENST00000341316 ZNF73O43830 326 aaPredicted RBP13.2□□□□□ -0.3
SPG7-202ENST00000341316 DSCR8Q96T75 97 aa13.2□□□□□ -0.3
SPG7-202ENST00000341316 DNAH1Q9P2D7 4330 aa13.19□□□□□ -0.3
SPG7-202ENST00000341316 SYCNQ0VAF6 134 aa13.18□□□□□ -0.3
SPG7-202ENST00000341316 M0R378 163 aa13.16□□□□□ -0.3
SPG7-202ENST00000341316 CASC10Q5T4H9 136 aa13.16□□□□□ -0.3
SPG7-202ENST00000341316 Q6ZVQ6 151 aa13.16□□□□□ -0.3
SPG7-202ENST00000341316 LINC01547P58512 204 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms