RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 C9orf129Q5T035 196 aaKnown RBP7.04□□□□□ -1.28
SLC28A1-202ENST00000338602 XAGE1AQ9HD64 81 aa7.04□□□□□ -1.28
SLC28A1-202ENST00000338602 PCP4L1A6NKN8 68 aa7.03□□□□□ -1.28
SLC28A1-202ENST00000338602 HSBP1L1C9JCN9 74 aa7.03□□□□□ -1.28
SLC28A1-202ENST00000338602 HNRNPA3P51991 378 aaKnown RBP7.03□□□□□ -1.28
SLC28A1-202ENST00000338602 COX17Q14061 63 aa7.03□□□□□ -1.28
SLC28A1-202ENST00000338602 ANKRD39Q53RE8 183 aa7.03□□□□□ -1.28
SLC28A1-202ENST00000338602 TMEM223A0PJW6 202 aa7.02□□□□□ -1.29
SLC28A1-202ENST00000338602 PFN2P35080 140 aa7.02□□□□□ -1.29
SLC28A1-202ENST00000338602 C1orf137Q5JT78 98 aa7.02□□□□□ -1.29
SLC28A1-202ENST00000338602 SPINK6Q6UWN8 80 aa7.02□□□□□ -1.29
SLC28A1-202ENST00000338602 PSORS1C2Q9UIG4 136 aa7.02□□□□□ -1.29
SLC28A1-202ENST00000338602 ERG28Q9UKR5 140 aa7.02□□□□□ -1.29
SLC28A1-202ENST00000338602 SERTAD4-AS1Q5TG53 156 aa7.01□□□□□ -1.29
SLC28A1-202ENST00000338602 C14orf144Q96I85 54 aa7.01□□□□□ -1.29
SLC28A1-202ENST00000338602 HERVK_113P61574 105 aa7□□□□□ -1.29
SLC28A1-202ENST00000338602 REG3GQ6UW15 175 aa7□□□□□ -1.29
SLC28A1-202ENST00000338602 TP73-AS1Q9UF72 201 aa7□□□□□ -1.29
SLC28A1-202ENST00000338602 PLA2G2DQ9UNK4 145 aa7□□□□□ -1.29
SLC28A1-202ENST00000338602 C22orf24Q9Y442 160 aa7□□□□□ -1.29
SLC28A1-202ENST00000338602 RNF213Q63HN8 5207 aa7□□□□□ -1.29
SLC28A1-202ENST00000338602 IGKV2D-26A0A0A0MRZ7 120 aa6.99□□□□□ -1.29
SLC28A1-202ENST00000338602 LINC00587B1AMM8 73 aa6.99□□□□□ -1.29
SLC28A1-202ENST00000338602 TSTD3H0UI37 97 aa6.99□□□□□ -1.29
SLC28A1-202ENST00000338602 HERV-K104P63124 156 aa6.99□□□□□ -1.29
SLC28A1-202ENST00000338602 NKAPP1Q8N9T2 125 aa6.99□□□□□ -1.29
SLC28A1-202ENST00000338602 ZNF625Q96I27 306 aaPredicted RBP6.99□□□□□ -1.29
SLC28A1-202ENST00000338602 NMUP48645 174 aa6.98□□□□□ -1.29
SLC28A1-202ENST00000338602 LINC00158P58513 81 aa6.98□□□□□ -1.29
SLC28A1-202ENST00000338602 RPL24P83731 157 aaKnown RBP6.98□□□□□ -1.29
SLC28A1-202ENST00000338602 SRSF9Q13242 221 aaKnown RBP eCLIP6.98□□□□□ -1.29
SLC28A1-202ENST00000338602 MRPL55Q7Z7F7 128 aaKnown RBP6.98□□□□□ -1.29
SLC28A1-202ENST00000338602 KRTAP7-1Q8IUC3 87 aa6.98□□□□□ -1.29
SLC28A1-202ENST00000338602 MIEN1Q9BRT3 115 aa6.98□□□□□ -1.29
SLC28A1-202ENST00000338602 MYMXA0A1B0GTQ4 84 aa6.97□□□□□ -1.29
SLC28A1-202ENST00000338602 IGLV7-43P04211 117 aa6.97□□□□□ -1.29
SLC28A1-202ENST00000338602 PLEKHB2Q96CS7 222 aa6.97□□□□□ -1.29
SLC28A1-202ENST00000338602 FAT3Q8TDW7 4589 aa6.97□□□□□ -1.29
SLC28A1-202ENST00000338602 COX8AP10176 69 aa6.96□□□□□ -1.29
SLC28A1-202ENST00000338602 MEIG1Q5JSS6 88 aa6.96□□□□□ -1.29
SLC28A1-202ENST00000338602 PCP2Q8IVA1 136 aa6.96□□□□□ -1.29
SLC28A1-202ENST00000338602 DIRC1Q969H9 104 aa6.96□□□□□ -1.29
SLC28A1-202ENST00000338602 TTTY13Q9BZ97 58 aa6.96□□□□□ -1.29
SLC28A1-202ENST00000338602 SND1-IT1Q9HBX3 110 aa6.96□□□□□ -1.29
SLC28A1-202ENST00000338602 UQCR10Q9UDW1 63 aa6.96□□□□□ -1.29
SLC28A1-202ENST00000338602 NDUFA12Q9UI09 145 aa6.96□□□□□ -1.29
SLC28A1-202ENST00000338602 IGLV5-37A0A075B6J1 123 aa6.95□□□□□ -1.3
SLC28A1-202ENST00000338602 E9PLD3 99 aa6.95□□□□□ -1.3
SLC28A1-202ENST00000338602 LEPROTO15243 131 aa6.95□□□□□ -1.3
SLC28A1-202ENST00000338602 DDTP30046 118 aa6.95□□□□□ -1.3
SLC28A1-202ENST00000338602 SLC25A34Q6PIV7 304 aa6.95□□□□□ -1.3
SLC28A1-202ENST00000338602 LRP1Q07954 4544 aaKnown RBP6.95□□□□□ -1.3
SLC28A1-202ENST00000338602 BOD1L2Q8IYS8 172 aa6.95□□□□□ -1.3
SLC28A1-202ENST00000338602 A0A0U1RRA0 63 aa6.94□□□□□ -1.3
SLC28A1-202ENST00000338602 LGALS3P17931 250 aaKnown RBP6.94□□□□□ -1.3
SLC28A1-202ENST00000338602 TSPEAR-AS2P59090 65 aa6.94□□□□□ -1.3
SLC28A1-202ENST00000338602 KRTAP11-1Q8IUC1 163 aa6.94□□□□□ -1.3
SLC28A1-202ENST00000338602 LINC00167Q96N53 147 aa6.94□□□□□ -1.3
SLC28A1-202ENST00000338602 GAGE10A6NGK3 116 aa6.93□□□□□ -1.3
SLC28A1-202ENST00000338602 J3QQQ9 107 aa6.93□□□□□ -1.3
SLC28A1-202ENST00000338602 DLEU1O43261 78 aa6.93□□□□□ -1.3
SLC28A1-202ENST00000338602 SMIM13P0DJ93 91 aa6.93□□□□□ -1.3
SLC28A1-202ENST00000338602 LINC01600Q96MT4 127 aa6.93□□□□□ -1.3
SLC28A1-202ENST00000338602 RPL37AP8A6NKH3 93 aa6.92□□□□□ -1.3
SLC28A1-202ENST00000338602 H0Y9J4 135 aa6.91□□□□□ -1.3
SLC28A1-202ENST00000338602 ZNF861PO60384 105 aa6.91□□□□□ -1.3
SLC28A1-202ENST00000338602 BCE1O60756 84 aa6.91□□□□□ -1.3
SLC28A1-202ENST00000338602 VPREB1P12018 145 aa6.91□□□□□ -1.3
SLC28A1-202ENST00000338602 RPL28P46779 137 aaKnown RBP6.91□□□□□ -1.3
SLC28A1-202ENST00000338602 CTAG1AP78358 180 aa6.91□□□□□ -1.3
SLC28A1-202ENST00000338602 C2orf91Q6ZV80 131 aa6.91□□□□□ -1.3
SLC28A1-202ENST00000338602 MIR7-3HGQ8N6C7 128 aa6.91□□□□□ -1.3
SLC28A1-202ENST00000338602 ZNF815PA8K554 130 aa6.9□□□□□ -1.31
SLC28A1-202ENST00000338602 IGKV2-28A0A075B6P5 120 aa6.88□□□□□ -1.31
SLC28A1-202ENST00000338602 M0R378 163 aa6.88□□□□□ -1.31
SLC28A1-202ENST00000338602 IGKV2D-28P01615 120 aa6.88□□□□□ -1.31
SLC28A1-202ENST00000338602 MT1HL1P0DM35 61 aa6.88□□□□□ -1.31
SLC28A1-202ENST00000338602 UBE2AP49459 152 aa6.88□□□□□ -1.31
SLC28A1-202ENST00000338602 IGLV1-50A0A075B6I6 118 aa6.87□□□□□ -1.31
SLC28A1-202ENST00000338602 HIGD1BQ9P298 99 aa6.86□□□□□ -1.31
SLC28A1-202ENST00000338602 KRTAP10-8P60410 259 aa6.85□□□□□ -1.31
SLC28A1-202ENST00000338602 SCGB1D4Q6XE38 83 aa6.85□□□□□ -1.31
SLC28A1-202ENST00000338602 TNXBP22105 4242 aa6.85□□□□□ -1.31
SLC28A1-202ENST00000338602 A0A0J9YXY3 114 aa6.84□□□□□ -1.31
SLC28A1-202ENST00000338602 HINT1P49773 126 aaPredicted RBP6.84□□□□□ -1.31
SLC28A1-202ENST00000338602 TMEM126AQ9H061 195 aa6.84□□□□□ -1.31
SLC28A1-202ENST00000338602 LOC107984156A0A0G2JMH3 177 aa6.83□□□□□ -1.32
SLC28A1-202ENST00000338602 FAM19A1Q7Z5A9 133 aa6.83□□□□□ -1.32
SLC28A1-202ENST00000338602 ARL17AQ8IVW1 177 aa6.83□□□□□ -1.32
SLC28A1-202ENST00000338602 DAND5Q8N907 189 aa6.83□□□□□ -1.32
SLC28A1-202ENST00000338602 Q8NDZ9 215 aa6.83□□□□□ -1.32
SLC28A1-202ENST00000338602 SNHG12Q9BXW3 62 aa6.83□□□□□ -1.32
SLC28A1-202ENST00000338602 TMEM238C9JI98 176 aa6.82□□□□□ -1.32
SLC28A1-202ENST00000338602 M0R143 59 aa6.82□□□□□ -1.32
SLC28A1-202ENST00000338602 NCR3O14931 201 aa6.82□□□□□ -1.32
SLC28A1-202ENST00000338602 RPL13AP40429 203 aaKnown RBP6.82□□□□□ -1.32
SLC28A1-202ENST00000338602 HSD52Q0P140 79 aa6.82□□□□□ -1.32
SLC28A1-202ENST00000338602 BATFQ16520 125 aa6.82□□□□□ -1.32
SLC28A1-202ENST00000338602 TRBV10-2A0A0K0K1G8 114 aa6.82□□□□□ -1.32
SLC28A1-202ENST00000338602 PRYO14603 147 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms