RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 C16orf74Q96GX8 76 aa9.55□□□□□ -0.88
SYNE3-201ENST00000334258 C16orf95Q9H693 158 aa9.55□□□□□ -0.88
SYNE3-201ENST00000334258 BAHCC1Q9P281 2608 aa9.54□□□□□ -0.88
SYNE3-201ENST00000334258 FBN1P35555 2871 aaKnown RBP9.53□□□□□ -0.88
SYNE3-201ENST00000334258 A0A096LPF7 62 aa9.53□□□□□ -0.88
SYNE3-201ENST00000334258 CCL24O00175 119 aa9.53□□□□□ -0.88
SYNE3-201ENST00000334258 ATP5EP2Q5VTU8 51 aa9.53□□□□□ -0.88
SYNE3-201ENST00000334258 LY6G6DO95868 133 aa9.52□□□□□ -0.89
SYNE3-201ENST00000334258 LAMTOR3Q9UHA4 124 aa9.52□□□□□ -0.89
SYNE3-201ENST00000334258 HAMPP81172 84 aa9.52□□□□□ -0.89
SYNE3-201ENST00000334258 C6orf99Q4VX62 202 aa9.52□□□□□ -0.89
SYNE3-201ENST00000334258 INAFM1C9JVW0 142 aa9.51□□□□□ -0.89
SYNE3-201ENST00000334258 RETNQ9HD89 108 aa9.51□□□□□ -0.89
SYNE3-201ENST00000334258 SERP1Q9Y6X1 66 aa9.51□□□□□ -0.89
SYNE3-201ENST00000334258 COL6A5A8TX70 2615 aa9.51□□□□□ -0.89
SYNE3-201ENST00000334258 PKD1L1Q8TDX9 2849 aa9.51□□□□□ -0.89
SYNE3-201ENST00000334258 NDUFC2O95298 119 aa9.51□□□□□ -0.89
SYNE3-201ENST00000334258 PLAC8L1A1L4L8 177 aa9.5□□□□□ -0.89
SYNE3-201ENST00000334258 NOTCH1P46531 2555 aa9.5□□□□□ -0.89
SYNE3-201ENST00000334258 GIG44P09565 113 aaPredicted RBP9.5□□□□□ -0.89
SYNE3-201ENST00000334258 IGLV10-54A0A075B6I4 117 aa9.49□□□□□ -0.89
SYNE3-201ENST00000334258 GYPEP15421 78 aa9.49□□□□□ -0.89
SYNE3-201ENST00000334258 C9orf116Q5BN46 136 aaPredicted RBP9.49□□□□□ -0.89
SYNE3-201ENST00000334258 NANOS2P60321 138 aaKnown RBP9.49□□□□□ -0.89
SYNE3-201ENST00000334258 RBM3P98179 157 aaKnown RBP9.49□□□□□ -0.89
SYNE3-201ENST00000334258 Q8IZM0 81 aa9.49□□□□□ -0.89
SYNE3-201ENST00000334258 LINC01006Q8NI28 216 aa9.49□□□□□ -0.89
SYNE3-201ENST00000334258 MPLKIPQ8TAP9 179 aa9.48□□□□□ -0.89
SYNE3-201ENST00000334258 LINC00269Q8N2A0 174 aa9.47□□□□□ -0.89
SYNE3-201ENST00000334258 SNURFQ9Y675 71 aa9.47□□□□□ -0.89
SYNE3-201ENST00000334258 SMIM26A0A096LP01 95 aa9.46□□□□□ -0.89
SYNE3-201ENST00000334258 LINC00167Q96N53 147 aa9.46□□□□□ -0.89
SYNE3-201ENST00000334258 LYPD5Q6UWN5 251 aa9.46□□□□□ -0.9
SYNE3-201ENST00000334258 NDUFC2-KCTD14E9PQ53 114 aa9.44□□□□□ -0.9
SYNE3-201ENST00000334258 H7BZZ5 65 aa9.44□□□□□ -0.9
SYNE3-201ENST00000334258 TRBV10-3A0A0K0K1G6 114 aa9.43□□□□□ -0.9
SYNE3-201ENST00000334258 CMC4P56277 68 aaPredicted RBP9.43□□□□□ -0.9
SYNE3-201ENST00000334258 NBEAL1Q6ZS30 2694 aa9.43□□□□□ -0.9
SYNE3-201ENST00000334258 ANGP03950 147 aaKnown RBP9.43□□□□□ -0.9
SYNE3-201ENST00000334258 SPATA3Q8NHX4 192 aa9.43□□□□□ -0.9
SYNE3-201ENST00000334258 EPM2AB3EWF7 344 aa9.42□□□□□ -0.9
SYNE3-201ENST00000334258 LINC00575Q6W349 94 aa9.42□□□□□ -0.9
SYNE3-201ENST00000334258 LINC01547P58512 204 aaPredicted RBP9.42□□□□□ -0.9
SYNE3-201ENST00000334258 TRAV7A0A075B6U4 112 aa9.41□□□□□ -0.9
SYNE3-201ENST00000334258 M0R2N4 97 aa9.41□□□□□ -0.9
SYNE3-201ENST00000334258 Q6ZQT0 140 aa9.41□□□□□ -0.9
SYNE3-201ENST00000334258 CHCHD10Q8WYQ3 142 aaPredicted RBP9.41□□□□□ -0.9
SYNE3-201ENST00000334258 RMI2Q96E14 147 aa9.41□□□□□ -0.9
SYNE3-201ENST00000334258 ZNF561-AS1K7EIQ3 104 aa9.41□□□□□ -0.9
SYNE3-201ENST00000334258 Q6ZQY7 126 aa9.4□□□□□ -0.9
SYNE3-201ENST00000334258 TRAV10A0A0B4J240 114 aa9.4□□□□□ -0.9
SYNE3-201ENST00000334258 TRBV7-6A0A0J9YX20 115 aa9.4□□□□□ -0.9
SYNE3-201ENST00000334258 A0A1B0GUV1 79 aa9.4□□□□□ -0.9
SYNE3-201ENST00000334258 Q6ZVQ6 151 aa9.4□□□□□ -0.9
SYNE3-201ENST00000334258 SCXQ7RTU7 201 aa9.4□□□□□ -0.9
SYNE3-201ENST00000334258 CSNK1G2-AS1Q8NCQ2 148 aa9.4□□□□□ -0.9
SYNE3-201ENST00000334258 F8WEM9 126 aa9.39□□□□□ -0.91
SYNE3-201ENST00000334258 COX17Q14061 63 aa9.39□□□□□ -0.91
SYNE3-201ENST00000334258 CD164L2Q6UWJ8 174 aa9.39□□□□□ -0.91
SYNE3-201ENST00000334258 Q8NDZ9 215 aa9.39□□□□□ -0.91
SYNE3-201ENST00000334258 PMAIP1Q13794 54 aa9.39□□□□□ -0.91
SYNE3-201ENST00000334258 KIAA0087Q14695 138 aa9.39□□□□□ -0.91
SYNE3-201ENST00000334258 Q8N3U1 123 aa9.39□□□□□ -0.91
SYNE3-201ENST00000334258 KRTAP10-3P60369 221 aa9.38□□□□□ -0.91
SYNE3-201ENST00000334258 REG3AQ06141 175 aa9.37□□□□□ -0.91
SYNE3-201ENST00000334258 UNQ6190/PRO20217Q6UXQ8 127 aa9.37□□□□□ -0.91
SYNE3-201ENST00000334258 PRO0255Q9UI72 69 aa9.37□□□□□ -0.91
SYNE3-201ENST00000334258 C6orf223Q8N319 242 aa9.36□□□□□ -0.91
SYNE3-201ENST00000334258 C19orf73Q9NVV2 129 aa9.36□□□□□ -0.91
SYNE3-201ENST00000334258 FAM229BQ4G0N7 80 aa9.35□□□□□ -0.91
SYNE3-201ENST00000334258 C10orf25Q5T742 122 aa9.35□□□□□ -0.91
SYNE3-201ENST00000334258 LOC110117498A0A087WWA1 95 aa9.35□□□□□ -0.91
SYNE3-201ENST00000334258 SPAG11BQ08648 103 aa9.35□□□□□ -0.91
SYNE3-201ENST00000334258 IGLV1-51P01701 117 aa9.34□□□□□ -0.91
SYNE3-201ENST00000334258 DEFB4AO15263 64 aa9.34□□□□□ -0.91
SYNE3-201ENST00000334258 XAGE1AQ9HD64 81 aa9.32□□□□□ -0.92
SYNE3-201ENST00000334258 PDE6GP18545 87 aa9.32□□□□□ -0.92
SYNE3-201ENST00000334258 IGHV4-28A0A0C4DH34 117 aa9.32□□□□□ -0.92
SYNE3-201ENST00000334258 KLKP1Q107X0 134 aa9.32□□□□□ -0.92
SYNE3-201ENST00000334258 MUC7Q8TAX7 377 aa9.32□□□□□ -0.92
SYNE3-201ENST00000334258 MGAM2Q2M2H8 2515 aa9.32□□□□□ -0.92
SYNE3-201ENST00000334258 CYSRT1A8MQ03 144 aa9.31□□□□□ -0.92
SYNE3-201ENST00000334258 BCE1O60756 84 aa9.31□□□□□ -0.92
SYNE3-201ENST00000334258 TM2D3Q9BRN9 247 aa9.31□□□□□ -0.92
SYNE3-201ENST00000334258 DIRC1Q969H9 104 aa9.3□□□□□ -0.92
SYNE3-201ENST00000334258 CXCL6P80162 114 aa9.3□□□□□ -0.92
SYNE3-201ENST00000334258 HTN3P15516 51 aa9.29□□□□□ -0.92
SYNE3-201ENST00000334258 IGLV6-57P01721 117 aa9.28□□□□□ -0.92
SYNE3-201ENST00000334258 KLK12Q9UKR0 248 aa9.27□□□□□ -0.93
SYNE3-201ENST00000334258 MIFP14174 115 aa9.27□□□□□ -0.93
SYNE3-201ENST00000334258 COX7BP24311 80 aa9.26□□□□□ -0.93
SYNE3-201ENST00000334258 Q8N9L7 120 aa9.26□□□□□ -0.93
SYNE3-201ENST00000334258 ZNF73O43830 326 aaPredicted RBP9.25□□□□□ -0.93
SYNE3-201ENST00000334258 NREPQ16612 68 aa9.25□□□□□ -0.93
SYNE3-201ENST00000334258 C9orf66Q5T8R8 295 aa9.25□□□□□ -0.93
SYNE3-201ENST00000334258 BPY2O14599 106 aa9.25□□□□□ -0.93
SYNE3-201ENST00000334258 H3BQ85 93 aa9.24□□□□□ -0.93
SYNE3-201ENST00000334258 DAD1P61803 113 aa9.24□□□□□ -0.93
SYNE3-201ENST00000334258 LINC00612Q8N6U2 182 aa9.24□□□□□ -0.93
SYNE3-201ENST00000334258 X6R8D5 127 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms