RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 NDUFC2O95298 119 aa11.73□□□□□ -0.53
DDX28-201ENST00000332395 NANOS2P60321 138 aaKnown RBP11.73□□□□□ -0.53
DDX28-201ENST00000332395 UNQ6190/PRO20217Q6UXQ8 127 aa11.73□□□□□ -0.53
DDX28-201ENST00000332395 TENM3Q9P273 2699 aa11.73□□□□□ -0.53
DDX28-201ENST00000332395 A0A087WYN8 130 aa11.72□□□□□ -0.53
DDX28-201ENST00000332395 Q9HAA7 133 aa11.72□□□□□ -0.53
DDX28-201ENST00000332395 CYSRT1A8MQ03 144 aa11.72□□□□□ -0.53
DDX28-201ENST00000332395 INAFM2P0DMQ5 153 aa11.72□□□□□ -0.53
DDX28-201ENST00000332395 PRR3P79522 188 aaKnown RBP11.72□□□□□ -0.53
DDX28-201ENST00000332395 C11orf45Q8TAV5 145 aa11.71□□□□□ -0.54
DDX28-201ENST00000332395 DEFB131BA0A096LNP1 70 aa11.7□□□□□ -0.54
DDX28-201ENST00000332395 ESRGQ1W209 222 aa11.7□□□□□ -0.54
DDX28-201ENST00000332395 DNAL4O96015 105 aa11.69□□□□□ -0.54
DDX28-201ENST00000332395 GAGE2AQ6NT46 116 aa11.68□□□□□ -0.54
DDX28-201ENST00000332395 MUC7Q8TAX7 377 aa11.68□□□□□ -0.54
DDX28-201ENST00000332395 Q8NDZ9 215 aa11.67□□□□□ -0.54
DDX28-201ENST00000332395 COX7CP15954 63 aa11.67□□□□□ -0.54
DDX28-201ENST00000332395 HIST1H4AP62805 103 aaKnown RBP11.67□□□□□ -0.54
DDX28-201ENST00000332395 BAHCC1Q9P281 2608 aa11.67□□□□□ -0.54
DDX28-201ENST00000332395 GVQW2A0A096LPI5 108 aaPredicted RBP11.66□□□□□ -0.54
DDX28-201ENST00000332395 LECT2O14960 151 aa11.66□□□□□ -0.54
DDX28-201ENST00000332395 KRTAP26-1Q6PEX3 210 aa11.65□□□□□ -0.54
DDX28-201ENST00000332395 C2orf48Q96LS8 159 aa11.65□□□□□ -0.54
DDX28-201ENST00000332395 NCR3O14931 201 aa11.65□□□□□ -0.54
DDX28-201ENST00000332395 PRB2P02812 416 aaPredicted RBP11.64□□□□□ -0.55
DDX28-201ENST00000332395 C6orf48Q9UBA6 75 aa11.64□□□□□ -0.55
DDX28-201ENST00000332395 NOTCH1P46531 2555 aa11.64□□□□□ -0.55
DDX28-201ENST00000332395 COL6A5A8TX70 2615 aa11.63□□□□□ -0.55
DDX28-201ENST00000332395 LINC01556Q5JQF7 62 aa11.62□□□□□ -0.55
DDX28-201ENST00000332395 ZNF561-AS1K7EIQ3 104 aa11.62□□□□□ -0.55
DDX28-201ENST00000332395 ATOX1O00244 68 aa11.62□□□□□ -0.55
DDX28-201ENST00000332395 HIGD2BQ4VC39 106 aa11.62□□□□□ -0.55
DDX28-201ENST00000332395 CRYGAP11844 174 aa11.61□□□□□ -0.55
DDX28-201ENST00000332395 S100A7L2Q5SY68 101 aa11.61□□□□□ -0.55
DDX28-201ENST00000332395 OBSCN-AS1Q96MR7 158 aa11.6□□□□□ -0.55
DDX28-201ENST00000332395 C1orf43Q9BWL3 253 aa11.6□□□□□ -0.55
DDX28-201ENST00000332395 A0A1B0GX51 115 aa11.59□□□□□ -0.55
DDX28-201ENST00000332395 SLPIP03973 132 aa11.59□□□□□ -0.55
DDX28-201ENST00000332395 C9orf129Q5T035 196 aaKnown RBP11.59□□□□□ -0.55
DDX28-201ENST00000332395 C15orf56Q8N910 161 aa11.59□□□□□ -0.55
DDX28-201ENST00000332395 CAMK2N2Q96S95 79 aa11.59□□□□□ -0.55
DDX28-201ENST00000332395 TM2D3Q9BRN9 247 aa11.59□□□□□ -0.55
DDX28-201ENST00000332395 Q6JHZ5 121 aa11.58□□□□□ -0.56
DDX28-201ENST00000332395 C14orf132Q9NPU4 83 aa11.58□□□□□ -0.56
DDX28-201ENST00000332395 C6orf99Q4VX62 202 aa11.58□□□□□ -0.56
DDX28-201ENST00000332395 TRAV10A0A0B4J240 114 aa11.57□□□□□ -0.56
DDX28-201ENST00000332395 K7EIL1 84 aa11.57□□□□□ -0.56
DDX28-201ENST00000332395 RPL18AQ02543 176 aaKnown RBP11.57□□□□□ -0.56
DDX28-201ENST00000332395 ORMDL1Q9P0S3 153 aa11.57□□□□□ -0.56
DDX28-201ENST00000332395 Q8N814 137 aa11.57□□□□□ -0.56
DDX28-201ENST00000332395 LINC00167Q96N53 147 aa11.57□□□□□ -0.56
DDX28-201ENST00000332395 XAGE1AQ9HD64 81 aa11.57□□□□□ -0.56
DDX28-201ENST00000332395 NBEAL1Q6ZS30 2694 aa11.56□□□□□ -0.56
DDX28-201ENST00000332395 IGKV2D-24A0A075B6R9 120 aa11.56□□□□□ -0.56
DDX28-201ENST00000332395 LOC107984640A0A0U1RRK4 108 aa11.56□□□□□ -0.56
DDX28-201ENST00000332395 J3KT08 172 aa11.56□□□□□ -0.56
DDX28-201ENST00000332395 MRAPQ8TCY5 172 aa11.56□□□□□ -0.56
DDX28-201ENST00000332395 DNAH10OSP0CZ25 163 aa11.55□□□□□ -0.56
DDX28-201ENST00000332395 IGLV6-57P01721 117 aa11.55□□□□□ -0.56
DDX28-201ENST00000332395 Q6ZRU5 148 aa11.55□□□□□ -0.56
DDX28-201ENST00000332395 LINC00846Q9NV44 126 aa11.55□□□□□ -0.56
DDX28-201ENST00000332395 HUWE1Q7Z6Z7 4374 aaKnown RBP11.54□□□□□ -0.56
DDX28-201ENST00000332395 IGKV3D-7A0A0C4DH55 119 aa11.54□□□□□ -0.56
DDX28-201ENST00000332395 hADV29S1A0JD25 119 aa11.54□□□□□ -0.56
DDX28-201ENST00000332395 RPS28P62857 69 aaKnown RBP11.52□□□□□ -0.57
DDX28-201ENST00000332395 LINC00588Q9Y4M8 146 aa11.51□□□□□ -0.57
DDX28-201ENST00000332395 TRBV10-3A0A0K0K1G6 114 aa11.5□□□□□ -0.57
DDX28-201ENST00000332395 LINC00575Q6W349 94 aa11.5□□□□□ -0.57
DDX28-201ENST00000332395 SERP2Q8N6R1 65 aa11.5□□□□□ -0.57
DDX28-201ENST00000332395 CYSTM1Q9H1C7 97 aa11.5□□□□□ -0.57
DDX28-201ENST00000332395 NDUFC2-KCTD14E9PQ53 114 aa11.5□□□□□ -0.57
DDX28-201ENST00000332395 UPK3BQ9BT76 320 aa11.49□□□□□ -0.57
DDX28-201ENST00000332395 FAM19A5Q7Z5A7 132 aaPredicted RBP11.48□□□□□ -0.57
DDX28-201ENST00000332395 A0A087WVE0 104 aa11.48□□□□□ -0.57
DDX28-201ENST00000332395 TMEM256-PLSCR3K7ERE1 68 aa11.48□□□□□ -0.57
DDX28-201ENST00000332395 F8WDY8 70 aa11.47□□□□□ -0.57
DDX28-201ENST00000332395 VPREB1P12018 145 aa11.47□□□□□ -0.57
DDX28-201ENST00000332395 TRAV23DV6A0A075B6W5 121 aa11.47□□□□□ -0.57
DDX28-201ENST00000332395 TMEM258P61165 79 aa11.46□□□□□ -0.57
DDX28-201ENST00000332395 USP17L23D6RBM5 183 aa11.45□□□□□ -0.58
DDX28-201ENST00000332395 CCKP06307 115 aa11.45□□□□□ -0.58
DDX28-201ENST00000332395 SYCNQ0VAF6 134 aa11.45□□□□□ -0.58
DDX28-201ENST00000332395 Q6ZRP5 223 aa11.45□□□□□ -0.58
DDX28-201ENST00000332395 DIRC1Q969H9 104 aa11.44□□□□□ -0.58
DDX28-201ENST00000332395 JMJD7-PLA2G4BH0Y9G9 81 aa11.43□□□□□ -0.58
DDX28-201ENST00000332395 MGAM2Q2M2H8 2515 aa11.43□□□□□ -0.58
DDX28-201ENST00000332395 ZNF73O43830 326 aaPredicted RBP11.43□□□□□ -0.58
DDX28-201ENST00000332395 C5orf47Q569G3 176 aa11.43□□□□□ -0.58
DDX28-201ENST00000332395 DNAH1Q9P2D7 4330 aa11.42□□□□□ -0.58
DDX28-201ENST00000332395 M0R378 163 aa11.42□□□□□ -0.58
DDX28-201ENST00000332395 DPH3Q96FX2 82 aa11.42□□□□□ -0.58
DDX28-201ENST00000332395 CASC10Q5T4H9 136 aa11.39□□□□□ -0.59
DDX28-201ENST00000332395 ATP5EP2Q5VTU8 51 aa11.38□□□□□ -0.59
DDX28-201ENST00000332395 Q6ZQY7 126 aa11.38□□□□□ -0.59
DDX28-201ENST00000332395 COX7BP24311 80 aa11.38□□□□□ -0.59
DDX28-201ENST00000332395 ELOF1P60002 83 aaKnown RBP11.38□□□□□ -0.59
DDX28-201ENST00000332395 TRBV7-6A0A0J9YX20 115 aa11.37□□□□□ -0.59
DDX28-201ENST00000332395 RMI2Q96E14 147 aa11.37□□□□□ -0.59
DDX28-201ENST00000332395 TLX1NBP0CAT3 122 aa11.35□□□□□ -0.59
DDX28-201ENST00000332395 OXTP01178 125 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms