RNA–Protein interactions for RNA: ENST00000322310.9

SSNA1-201, Transcript of SS nuclear autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSNA1, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-201ENST00000322310 MRPL18Q9H0U6 180 aaKnown RBP10.82□□□□□ -0.68
SSNA1-201ENST00000322310 H3BRM9 83 aa10.81□□□□□ -0.68
SSNA1-201ENST00000322310 LORP23490 312 aaPredicted RBP10.81□□□□□ -0.68
SSNA1-201ENST00000322310 IGLV5-39A0A0G2JS06 123 aa10.8□□□□□ -0.68
SSNA1-201ENST00000322310 PMVKQ15126 192 aa10.79□□□□□ -0.68
SSNA1-201ENST00000322310 KIAA1644Q3SXP7 199 aa10.79□□□□□ -0.68
SSNA1-201ENST00000322310 FAM19A2Q8N3H0 131 aa10.79□□□□□ -0.68
SSNA1-201ENST00000322310 hCG_2014768A0A024R1R8 64 aa10.78□□□□□ -0.68
SSNA1-201ENST00000322310 KRTAP10-6P60371 365 aaPredicted RBP10.78□□□□□ -0.68
SSNA1-201ENST00000322310 COX17Q14061 63 aa10.78□□□□□ -0.68
SSNA1-201ENST00000322310 SMCR5Q8TEV8 140 aa10.78□□□□□ -0.68
SSNA1-201ENST00000322310 MOBPQ13875 183 aa10.77□□□□□ -0.69
SSNA1-201ENST00000322310 RPS29P62273 56 aaKnown RBP10.76□□□□□ -0.69
SSNA1-201ENST00000322310 IGLV9-49A0A0B4J1Y8 123 aa10.75□□□□□ -0.69
SSNA1-201ENST00000322310 LINC00483Q53H64 154 aa10.75□□□□□ -0.69
SSNA1-201ENST00000322310 SLC25A20O43772 301 aa10.74□□□□□ -0.69
SSNA1-201ENST00000322310 GAGE2AQ6NT46 116 aa10.74□□□□□ -0.69
SSNA1-201ENST00000322310 IGLC3P0DOY3 106 aa10.73□□□□□ -0.69
SSNA1-201ENST00000322310 PCOTHQ58A44 107 aa10.73□□□□□ -0.69
SSNA1-201ENST00000322310 ANAPC16Q96DE5 110 aa10.73□□□□□ -0.69
SSNA1-201ENST00000322310 PRYO14603 147 aa10.72□□□□□ -0.69
SSNA1-201ENST00000322310 MT-ND4LP03901 98 aa10.72□□□□□ -0.69
SSNA1-201ENST00000322310 ZNF22P17026 224 aaPredicted RBP10.72□□□□□ -0.69
SSNA1-201ENST00000322310 IGLV8-61A0A075B6I0 122 aa10.71□□□□□ -0.69
SSNA1-201ENST00000322310 LINC01549A6NIU2 74 aa10.71□□□□□ -0.69
SSNA1-201ENST00000322310 SPRR1AP35321 89 aa10.71□□□□□ -0.69
SSNA1-201ENST00000322310 A0A0U1RRA0 63 aa10.7□□□□□ -0.7
SSNA1-201ENST00000322310 LINC01546A6NGU7 62 aa10.7□□□□□ -0.7
SSNA1-201ENST00000322310 KRTAP4-16G5E9R7 235 aaPredicted RBP10.7□□□□□ -0.7
SSNA1-201ENST00000322310 ETDCA0A1B0GVM5 59 aa10.69□□□□□ -0.7
SSNA1-201ENST00000322310 LINC00158P58513 81 aa10.69□□□□□ -0.7
SSNA1-201ENST00000322310 SSBP3-AS1Q7Z2R9 100 aa10.69□□□□□ -0.7
SSNA1-201ENST00000322310 NCR3O14931 201 aa10.68□□□□□ -0.7
SSNA1-201ENST00000322310 NDUFA6P56556 154 aa10.68□□□□□ -0.7
SSNA1-201ENST00000322310 KCNQ1DNQ9H478 68 aa10.68□□□□□ -0.7
SSNA1-201ENST00000322310 ERC2-IT1O76042 136 aa10.67□□□□□ -0.7
SSNA1-201ENST00000322310 KRTAP9-7A8MTY7 169 aa10.65□□□□□ -0.7
SSNA1-201ENST00000322310 M0R2T5 61 aa10.65□□□□□ -0.7
SSNA1-201ENST00000322310 BOD1L2Q8IYS8 172 aa10.65□□□□□ -0.7
SSNA1-201ENST00000322310 SFTA2Q6UW10 78 aa10.64□□□□□ -0.71
SSNA1-201ENST00000322310 TRBV10-3A0A0K0K1G6 114 aa10.62□□□□□ -0.71
SSNA1-201ENST00000322310 C11orf86A6NJI1 115 aa10.62□□□□□ -0.71
SSNA1-201ENST00000322310 FA2HQ7L5A8 372 aa10.62□□□□□ -0.71
SSNA1-201ENST00000322310 C9orf92A6NGG3 77 aa10.61□□□□□ -0.71
SSNA1-201ENST00000322310 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.61□□□□□ -0.71
SSNA1-201ENST00000322310 B5MCH6 92 aa10.61□□□□□ -0.71
SSNA1-201ENST00000322310 TMEM170BQ5T4T1 132 aa10.61□□□□□ -0.71
SSNA1-201ENST00000322310 SMCO4Q9NRQ5 59 aa10.61□□□□□ -0.71
SSNA1-201ENST00000322310 SMIM13P0DJ93 91 aa10.6□□□□□ -0.71
SSNA1-201ENST00000322310 A0A096LNJ9 63 aa10.59□□□□□ -0.71
SSNA1-201ENST00000322310 C9orf153Q5TBE3 101 aa10.59□□□□□ -0.71
SSNA1-201ENST00000322310 Q9BRP9 147 aa10.59□□□□□ -0.71
SSNA1-201ENST00000322310 FLGP20930 4061 aaPredicted RBP10.57□□□□□ -0.72
SSNA1-201ENST00000322310 ATP6V1G1O75348 118 aa10.56□□□□□ -0.72
SSNA1-201ENST00000322310 MIR7-3HGQ8N6C7 128 aa10.56□□□□□ -0.72
SSNA1-201ENST00000322310 BAGE3Q86Y29 109 aa10.55□□□□□ -0.72
SSNA1-201ENST00000322310 TRAV9-1A0A075B6T8 112 aa10.53□□□□□ -0.72
SSNA1-201ENST00000322310 MEIG1Q5JSS6 88 aa10.53□□□□□ -0.72
SSNA1-201ENST00000322310 S100A12P80511 92 aa10.52□□□□□ -0.73
SSNA1-201ENST00000322310 PMCHL1Q16048 86 aa10.52□□□□□ -0.73
SSNA1-201ENST00000322310 Q6ZRX8 168 aa10.52□□□□□ -0.73
SSNA1-201ENST00000322310 COX6B2Q6YFQ2 88 aa10.51□□□□□ -0.73
SSNA1-201ENST00000322310 URB1-AS1Q96HZ7 61 aa10.51□□□□□ -0.73
SSNA1-201ENST00000322310 TMEM223A0PJW6 202 aa10.49□□□□□ -0.73
SSNA1-201ENST00000322310 HBDP02042 147 aa10.49□□□□□ -0.73
SSNA1-201ENST00000322310 DDTP30046 118 aa10.48□□□□□ -0.73
SSNA1-201ENST00000322310 FABP9Q0Z7S8 132 aa10.48□□□□□ -0.73
SSNA1-201ENST00000322310 HRCT1Q6UXD1 115 aa10.48□□□□□ -0.73
SSNA1-201ENST00000322310 IGLV6-57P01721 117 aa10.47□□□□□ -0.73
SSNA1-201ENST00000322310 ST20-AS1Q8NBB2 130 aa10.47□□□□□ -0.73
SSNA1-201ENST00000322310 CHTOPQ9Y3Y2 248 aaKnown RBP10.47□□□□□ -0.73
SSNA1-201ENST00000322310 LIMD2Q9BT23 127 aa10.46□□□□□ -0.73
SSNA1-201ENST00000322310 LINC00614P0C842 121 aa10.45□□□□□ -0.74
SSNA1-201ENST00000322310 HERV-K104P63124 156 aa10.43□□□□□ -0.74
SSNA1-201ENST00000322310 S100PP25815 95 aa10.42□□□□□ -0.74
SSNA1-201ENST00000322310 C18orf32Q8TCD1 76 aa10.42□□□□□ -0.74
SSNA1-201ENST00000322310 TRBV10-2A0A0K0K1G8 114 aa10.41□□□□□ -0.74
SSNA1-201ENST00000322310 JOSD1Q15040 202 aaPredicted RBP10.4□□□□□ -0.74
SSNA1-201ENST00000322310 LINC00587B1AMM8 73 aa10.39□□□□□ -0.75
SSNA1-201ENST00000322310 COX19Q49B96 90 aa10.39□□□□□ -0.75
SSNA1-201ENST00000322310 MAP1LC3CQ9BXW4 147 aa10.39□□□□□ -0.75
SSNA1-201ENST00000322310 SEC11CQ9BY50 192 aa10.39□□□□□ -0.75
SSNA1-201ENST00000322310 SSPOA2VEC9 5147 aa10.38□□□□□ -0.75
SSNA1-201ENST00000322310 TRAV23DV6A0A075B6W5 121 aa10.37□□□□□ -0.75
SSNA1-201ENST00000322310 LOC107984156A0A0G2JMH3 177 aa10.37□□□□□ -0.75
SSNA1-201ENST00000322310 RPL37P61927 97 aaKnown RBP10.37□□□□□ -0.75
SSNA1-201ENST00000322310 S100A7L2Q5SY68 101 aa10.37□□□□□ -0.75
SSNA1-201ENST00000322310 ARL17AQ8IVW1 177 aa10.37□□□□□ -0.75
SSNA1-201ENST00000322310 SPANXB1Q9NS25 103 aaPredicted RBP10.37□□□□□ -0.75
SSNA1-201ENST00000322310 USH2AO75445 5202 aa10.36□□□□□ -0.75
SSNA1-201ENST00000322310 MYMXA0A1B0GTQ4 84 aa10.36□□□□□ -0.75
SSNA1-201ENST00000322310 TRAV12-1A0A0B4J245 112 aa10.34□□□□□ -0.75
SSNA1-201ENST00000322310 ZNF73O43830 326 aaPredicted RBP10.34□□□□□ -0.75
SSNA1-201ENST00000322310 TSPEAR-AS2P59090 65 aa10.33□□□□□ -0.76
SSNA1-201ENST00000322310 H7C2G1 150 aa10.32□□□□□ -0.76
SSNA1-201ENST00000322310 SPRR1BP22528 89 aa10.32□□□□□ -0.76
SSNA1-201ENST00000322310 RPS10P5Q9NQ39 176 aa10.32□□□□□ -0.76
SSNA1-201ENST00000322310 IFI27L1Q96BM0 104 aa10.31□□□□□ -0.76
SSNA1-201ENST00000322310 TMEM218A2RU14 115 aa10.3□□□□□ -0.76
SSNA1-201ENST00000322310 C5orf52A6NGY3 159 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms