RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 LINC01547P58512 204 aaPredicted RBP6.63□□□□□ -1.35
PTPRA-202ENST00000318266 Q8IZM0 81 aa6.63□□□□□ -1.35
PTPRA-202ENST00000318266 LINC00167Q96N53 147 aa6.63□□□□□ -1.35
PTPRA-202ENST00000318266 HIVEP1P15822 2718 aa6.63□□□□□ -1.35
PTPRA-202ENST00000318266 Q6ZQT0 140 aa6.63□□□□□ -1.35
PTPRA-202ENST00000318266 WFDC11Q8NEX6 87 aa6.63□□□□□ -1.35
PTPRA-202ENST00000318266 WIPF1O43516 503 aa6.62□□□□□ -1.35
PTPRA-202ENST00000318266 DSCR9P59020 149 aa6.62□□□□□ -1.35
PTPRA-202ENST00000318266 Q6ZQY7 126 aa6.62□□□□□ -1.35
PTPRA-202ENST00000318266 Q6ZVQ6 151 aa6.62□□□□□ -1.35
PTPRA-202ENST00000318266 F8WEM9 126 aa6.62□□□□□ -1.35
PTPRA-202ENST00000318266 LINC00336Q6ZUF6 198 aa6.62□□□□□ -1.35
PTPRA-202ENST00000318266 C6orf223Q8N319 242 aa6.62□□□□□ -1.35
PTPRA-202ENST00000318266 LYPD5Q6UWN5 251 aa6.61□□□□□ -1.35
PTPRA-202ENST00000318266 LINC00575Q6W349 94 aa6.61□□□□□ -1.35
PTPRA-202ENST00000318266 ANGP03950 147 aaKnown RBP6.61□□□□□ -1.35
PTPRA-202ENST00000318266 MDFIQ99750 246 aa6.61□□□□□ -1.35
PTPRA-202ENST00000318266 TRAV7A0A075B6U4 112 aa6.61□□□□□ -1.35
PTPRA-202ENST00000318266 NDUFC2-KCTD14E9PQ53 114 aa6.61□□□□□ -1.35
PTPRA-202ENST00000318266 FSHBP01225 129 aa6.6□□□□□ -1.35
PTPRA-202ENST00000318266 C10orf25Q5T742 122 aa6.6□□□□□ -1.35
PTPRA-202ENST00000318266 DEFB4AO15263 64 aa6.6□□□□□ -1.35
PTPRA-202ENST00000318266 CHCHD10Q8WYQ3 142 aaPredicted RBP6.6□□□□□ -1.35
PTPRA-202ENST00000318266 TM2D3Q9BRN9 247 aa6.6□□□□□ -1.35
PTPRA-202ENST00000318266 KIAA0087Q14695 138 aa6.59□□□□□ -1.35
PTPRA-202ENST00000318266 UNQ6190/PRO20217Q6UXQ8 127 aa6.59□□□□□ -1.35
PTPRA-202ENST00000318266 LINC01006Q8NI28 216 aa6.59□□□□□ -1.35
PTPRA-202ENST00000318266 ZNF561-AS1K7EIQ3 104 aa6.59□□□□□ -1.35
PTPRA-202ENST00000318266 LINC00474Q9P2X8 69 aa6.59□□□□□ -1.35
PTPRA-202ENST00000318266 HIVEP2P31629 2446 aa6.59□□□□□ -1.35
PTPRA-202ENST00000318266 TRBV10-3A0A0K0K1G6 114 aa6.59□□□□□ -1.36
PTPRA-202ENST00000318266 CSNK1G2-AS1Q8NCQ2 148 aa6.59□□□□□ -1.36
PTPRA-202ENST00000318266 SERP1Q9Y6X1 66 aa6.59□□□□□ -1.36
PTPRA-202ENST00000318266 Q8N9L7 120 aa6.58□□□□□ -1.36
PTPRA-202ENST00000318266 C1orf43Q9BWL3 253 aa6.58□□□□□ -1.36
PTPRA-202ENST00000318266 XAGE1AQ9HD64 81 aa6.58□□□□□ -1.36
PTPRA-202ENST00000318266 LINC00482Q8N8I6 264 aa6.57□□□□□ -1.36
PTPRA-202ENST00000318266 PKIGQ9Y2B9 76 aa6.57□□□□□ -1.36
PTPRA-202ENST00000318266 REG3AQ06141 175 aa6.57□□□□□ -1.36
PTPRA-202ENST00000318266 CD164L2Q6UWJ8 174 aa6.56□□□□□ -1.36
PTPRA-202ENST00000318266 DNAJC9-AS1A6NH13 148 aa6.56□□□□□ -1.36
PTPRA-202ENST00000318266 FP248Q71RG6 208 aaPredicted RBP6.56□□□□□ -1.36
PTPRA-202ENST00000318266 C19orf73Q9NVV2 129 aa6.56□□□□□ -1.36
PTPRA-202ENST00000318266 KLKP1Q107X0 134 aa6.55□□□□□ -1.36
PTPRA-202ENST00000318266 A0A1B0GUV1 79 aa6.55□□□□□ -1.36
PTPRA-202ENST00000318266 SPAG11BQ08648 103 aa6.55□□□□□ -1.36
PTPRA-202ENST00000318266 MUC7Q8TAX7 377 aa6.55□□□□□ -1.36
PTPRA-202ENST00000318266 LOC110117498A0A087WWA1 95 aa6.55□□□□□ -1.36
PTPRA-202ENST00000318266 COX17Q14061 63 aa6.55□□□□□ -1.36
PTPRA-202ENST00000318266 MPLKIPQ8TAP9 179 aa6.54□□□□□ -1.36
PTPRA-202ENST00000318266 TRBV7-6A0A0J9YX20 115 aa6.54□□□□□ -1.36
PTPRA-202ENST00000318266 PRO0255Q9UI72 69 aa6.54□□□□□ -1.36
PTPRA-202ENST00000318266 HTN3P15516 51 aa6.53□□□□□ -1.36
PTPRA-202ENST00000318266 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.53□□□□□ -1.36
PTPRA-202ENST00000318266 A0A0U1RQV1 116 aa6.53□□□□□ -1.36
PTPRA-202ENST00000318266 DAD1P61803 113 aa6.53□□□□□ -1.36
PTPRA-202ENST00000318266 MRAPQ8TCY5 172 aa6.53□□□□□ -1.36
PTPRA-202ENST00000318266 PRO0628Q9UI54 55 aa6.53□□□□□ -1.36
PTPRA-202ENST00000318266 INAFM1C9JVW0 142 aa6.52□□□□□ -1.37
PTPRA-202ENST00000318266 BRK1Q8WUW1 75 aa6.52□□□□□ -1.37
PTPRA-202ENST00000318266 SMIM26A0A096LP01 95 aa6.52□□□□□ -1.37
PTPRA-202ENST00000318266 IGLV1-51P01701 117 aa6.52□□□□□ -1.37
PTPRA-202ENST00000318266 MIFP14174 115 aa6.52□□□□□ -1.37
PTPRA-202ENST00000318266 NREPQ16612 68 aa6.52□□□□□ -1.37
PTPRA-202ENST00000318266 KRTAP1-1Q07627 177 aa6.52□□□□□ -1.37
PTPRA-202ENST00000318266 VWFP04275 2813 aa6.51□□□□□ -1.37
PTPRA-202ENST00000318266 DIRC1Q969H9 104 aa6.51□□□□□ -1.37
PTPRA-202ENST00000318266 C16orf95Q9H693 158 aa6.51□□□□□ -1.37
PTPRA-202ENST00000318266 IGHV4-28A0A0C4DH34 117 aa6.51□□□□□ -1.37
PTPRA-202ENST00000318266 EPM2AB3EWF7 344 aa6.51□□□□□ -1.37
PTPRA-202ENST00000318266 BPY2O14599 106 aa6.51□□□□□ -1.37
PTPRA-202ENST00000318266 CXCL6P80162 114 aa6.51□□□□□ -1.37
PTPRA-202ENST00000318266 KLK12Q9UKR0 248 aa6.51□□□□□ -1.37
PTPRA-202ENST00000318266 IGLV6-57P01721 117 aa6.5□□□□□ -1.37
PTPRA-202ENST00000318266 TRBV7-4A0A0J9YYF1 115 aa6.5□□□□□ -1.37
PTPRA-202ENST00000318266 TMEM254Q8TBM7 123 aa6.5□□□□□ -1.37
PTPRA-202ENST00000318266 FAM229BQ4G0N7 80 aa6.5□□□□□ -1.37
PTPRA-202ENST00000318266 C3orf84H3BNL1 204 aa6.49□□□□□ -1.37
PTPRA-202ENST00000318266 ZNF73O43830 326 aaPredicted RBP6.49□□□□□ -1.37
PTPRA-202ENST00000318266 CMC4P56277 68 aaPredicted RBP6.49□□□□□ -1.37
PTPRA-202ENST00000318266 COX7BP24311 80 aa6.48□□□□□ -1.37
PTPRA-202ENST00000318266 DEFB135Q30KP9 77 aa6.48□□□□□ -1.37
PTPRA-202ENST00000318266 HIGD2BQ4VC39 106 aa6.48□□□□□ -1.37
PTPRA-202ENST00000318266 C9orf66Q5T8R8 295 aa6.48□□□□□ -1.37
PTPRA-202ENST00000318266 BCE1O60756 84 aa6.48□□□□□ -1.37
PTPRA-202ENST00000318266 PDE6GP18545 87 aa6.48□□□□□ -1.37
PTPRA-202ENST00000318266 X6R8D5 127 aa6.48□□□□□ -1.37
PTPRA-202ENST00000318266 DEFB105AQ8NG35 78 aa6.47□□□□□ -1.37
PTPRA-202ENST00000318266 C6orf48Q9UBA6 75 aa6.47□□□□□ -1.37
PTPRA-202ENST00000318266 SMR3AQ99954 134 aa6.46□□□□□ -1.37
PTPRA-202ENST00000318266 LRCOL1A6NCL2 159 aa6.46□□□□□ -1.38
PTPRA-202ENST00000318266 CELA1Q9UNI1 258 aa6.46□□□□□ -1.38
PTPRA-202ENST00000318266 HIGD2AQ9BW72 106 aa6.45□□□□□ -1.38
PTPRA-202ENST00000318266 LINC00612Q8N6U2 182 aa6.45□□□□□ -1.38
PTPRA-202ENST00000318266 NSD1Q96L73 2696 aaPredicted RBP6.44□□□□□ -1.38
PTPRA-202ENST00000318266 NDUFC1O43677 76 aa6.44□□□□□ -1.38
PTPRA-202ENST00000318266 A0A0J9YWU9 116 aa6.44□□□□□ -1.38
PTPRA-202ENST00000318266 IGHV4-30-4P0DP06 118 aa6.44□□□□□ -1.38
PTPRA-202ENST00000318266 PRYO14603 147 aa6.43□□□□□ -1.38
PTPRA-202ENST00000318266 ELOF1P60002 83 aaKnown RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms