RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 SPATA3Q8NHX4 192 aa9.4□□□□□ -0.91
DDX54-202ENST00000314045 LINC00474Q9P2X8 69 aa9.39□□□□□ -0.91
DDX54-202ENST00000314045 F8WDY8 70 aa9.38□□□□□ -0.91
DDX54-202ENST00000314045 MT-ATP8P03928 68 aa9.38□□□□□ -0.91
DDX54-202ENST00000314045 MDFIQ99750 246 aa9.37□□□□□ -0.91
DDX54-202ENST00000314045 NDUFC2O95298 119 aa9.37□□□□□ -0.91
DDX54-202ENST00000314045 DHRS4-AS1Q9P1J3 65 aa9.37□□□□□ -0.91
DDX54-202ENST00000314045 M0QXV9 152 aa9.37□□□□□ -0.91
DDX54-202ENST00000314045 C7orf33Q8WU49 177 aa9.37□□□□□ -0.91
DDX54-202ENST00000314045 LRCOL1A6NCL2 159 aa9.36□□□□□ -0.91
DDX54-202ENST00000314045 A0A1B0GX51 115 aa9.36□□□□□ -0.91
DDX54-202ENST00000314045 ZNF575Q86XF7 245 aa9.35□□□□□ -0.91
DDX54-202ENST00000314045 LINC00337Q8N6G1 96 aa9.35□□□□□ -0.91
DDX54-202ENST00000314045 LINC00643Q86TS7 51 aa9.35□□□□□ -0.91
DDX54-202ENST00000314045 LINC00588Q9Y4M8 146 aa9.35□□□□□ -0.91
DDX54-202ENST00000314045 LINC00612Q8N6U2 182 aa9.35□□□□□ -0.91
DDX54-202ENST00000314045 PPDPFQ9H3Y8 114 aa9.35□□□□□ -0.91
DDX54-202ENST00000314045 C4orf48Q5BLP8 95 aa9.35□□□□□ -0.91
DDX54-202ENST00000314045 C1orf134Q5TEV5 83 aa9.35□□□□□ -0.91
DDX54-202ENST00000314045 APCP25054 2843 aa9.34□□□□□ -0.91
DDX54-202ENST00000314045 ENHOQ6UWT2 76 aa9.34□□□□□ -0.91
DDX54-202ENST00000314045 ZANQ9Y493 2812 aa9.34□□□□□ -0.91
DDX54-202ENST00000314045 NDUFB1O75438 58 aa9.33□□□□□ -0.92
DDX54-202ENST00000314045 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.33□□□□□ -0.92
DDX54-202ENST00000314045 SMIM20Q8N5G0 67 aa9.33□□□□□ -0.92
DDX54-202ENST00000314045 C10orf25Q5T742 122 aa9.33□□□□□ -0.92
DDX54-202ENST00000314045 CCKP06307 115 aa9.32□□□□□ -0.92
DDX54-202ENST00000314045 NBEAL2Q6ZNJ1 2754 aa9.32□□□□□ -0.92
DDX54-202ENST00000314045 NBEAL1Q6ZS30 2694 aa9.31□□□□□ -0.92
DDX54-202ENST00000314045 HIVEP1P15822 2718 aa9.31□□□□□ -0.92
DDX54-202ENST00000314045 C6orf48Q9UBA6 75 aa9.31□□□□□ -0.92
DDX54-202ENST00000314045 Q8N814 137 aa9.31□□□□□ -0.92
DDX54-202ENST00000314045 IGLV5-52A0A0A0MRZ9 124 aa9.3□□□□□ -0.92
DDX54-202ENST00000314045 FAM236AA0A1B0GUQ0 79 aa9.3□□□□□ -0.92
DDX54-202ENST00000314045 FAM236BA0A1B0GV22 79 aa9.3□□□□□ -0.92
DDX54-202ENST00000314045 SOSTDC1Q6X4U4 206 aa9.3□□□□□ -0.92
DDX54-202ENST00000314045 A0A087WYN8 130 aa9.29□□□□□ -0.92
DDX54-202ENST00000314045 BPY2O14599 106 aa9.29□□□□□ -0.92
DDX54-202ENST00000314045 MUC3AQ02505 3323 aa9.29□□□□□ -0.92
DDX54-202ENST00000314045 NDUFS5O43920 106 aa9.28□□□□□ -0.92
DDX54-202ENST00000314045 MRPL55Q7Z7F7 128 aaKnown RBP9.28□□□□□ -0.92
DDX54-202ENST00000314045 DNAH10OSP0CZ25 163 aa9.27□□□□□ -0.92
DDX54-202ENST00000314045 XGP55808 180 aa9.27□□□□□ -0.92
DDX54-202ENST00000314045 NDUFV3P56181 108 aaKnown RBP9.27□□□□□ -0.92
DDX54-202ENST00000314045 REG3GQ6UW15 175 aa9.27□□□□□ -0.93
DDX54-202ENST00000314045 TM2D3Q9BRN9 247 aa9.26□□□□□ -0.93
DDX54-202ENST00000314045 C3orf84H3BNL1 204 aa9.26□□□□□ -0.93
DDX54-202ENST00000314045 NBDYA0A0U1RRE5 68 aa9.25□□□□□ -0.93
DDX54-202ENST00000314045 H0Y9J4 135 aa9.25□□□□□ -0.93
DDX54-202ENST00000314045 SDIM1Q6ZPB5 146 aa9.25□□□□□ -0.93
DDX54-202ENST00000314045 SCXQ7RTU7 201 aa9.25□□□□□ -0.93
DDX54-202ENST00000314045 NSD1Q96L73 2696 aaPredicted RBP9.25□□□□□ -0.93
DDX54-202ENST00000314045 C22orf24Q9Y442 160 aa9.24□□□□□ -0.93
DDX54-202ENST00000314045 ATOX1O00244 68 aa9.24□□□□□ -0.93
DDX54-202ENST00000314045 ZNF706Q9Y5V0 76 aaPredicted RBP9.23□□□□□ -0.93
DDX54-202ENST00000314045 WIPF1O43516 503 aa9.22□□□□□ -0.93
DDX54-202ENST00000314045 LINC00575Q6W349 94 aa9.22□□□□□ -0.93
DDX54-202ENST00000314045 PRYO14603 147 aa9.21□□□□□ -0.93
DDX54-202ENST00000314045 UPK3BQ9BT76 320 aa9.21□□□□□ -0.93
DDX54-202ENST00000314045 PRR34Q9NV39 138 aa9.21□□□□□ -0.93
DDX54-202ENST00000314045 FAM19A3Q7Z5A8 133 aa9.21□□□□□ -0.93
DDX54-202ENST00000314045 LITAFQ99732 161 aa9.21□□□□□ -0.93
DDX54-202ENST00000314045 GVQW2A0A096LPI5 108 aaPredicted RBP9.19□□□□□ -0.94
DDX54-202ENST00000314045 IGLV9-49A0A0B4J1Y8 123 aa9.19□□□□□ -0.94
DDX54-202ENST00000314045 WWC2-AS2Q96NR7 200 aa9.19□□□□□ -0.94
DDX54-202ENST00000314045 HRNRQ86YZ3 2850 aaPredicted RBP9.19□□□□□ -0.94
DDX54-202ENST00000314045 ATP5EP2Q5VTU8 51 aa9.19□□□□□ -0.94
DDX54-202ENST00000314045 LINC00167Q96N53 147 aa9.18□□□□□ -0.94
DDX54-202ENST00000314045 SVIPQ8NHG7 77 aa9.18□□□□□ -0.94
DDX54-202ENST00000314045 PRLHP81277 87 aa9.17□□□□□ -0.94
DDX54-202ENST00000314045 CRYBG3Q68DQ2 2970 aa9.17□□□□□ -0.94
DDX54-202ENST00000314045 C1orf137Q5JT78 98 aa9.17□□□□□ -0.94
DDX54-202ENST00000314045 CCDC179H3BU77 68 aa9.16□□□□□ -0.94
DDX54-202ENST00000314045 KIAA0087Q14695 138 aa9.15□□□□□ -0.94
DDX54-202ENST00000314045 CDIP1Q9H305 208 aa9.15□□□□□ -0.94
DDX54-202ENST00000314045 HRCT1Q6UXD1 115 aa9.15□□□□□ -0.94
DDX54-202ENST00000314045 EIF4EBP3O60516 100 aaPredicted RBP9.15□□□□□ -0.95
DDX54-202ENST00000314045 MP68P56378 58 aa9.15□□□□□ -0.95
DDX54-202ENST00000314045 FAM240AA0A1B0GVK7 77 aa9.14□□□□□ -0.95
DDX54-202ENST00000314045 CELSR2Q9HCU4 2923 aa9.14□□□□□ -0.95
DDX54-202ENST00000314045 Q6ZRP5 223 aa9.13□□□□□ -0.95
DDX54-202ENST00000314045 SPINK6Q6UWN8 80 aa9.13□□□□□ -0.95
DDX54-202ENST00000314045 FAM218AQ96MZ4 157 aa9.12□□□□□ -0.95
DDX54-202ENST00000314045 SMCPP49901 116 aaPredicted RBP9.11□□□□□ -0.95
DDX54-202ENST00000314045 SMCR5Q8TEV8 140 aa9.11□□□□□ -0.95
DDX54-202ENST00000314045 WDFY3Q8IZQ1 3526 aa9.11□□□□□ -0.95
DDX54-202ENST00000314045 PRO0461Q9UI25 63 aa9.11□□□□□ -0.95
DDX54-202ENST00000314045 Q9BRP9 147 aa9.1□□□□□ -0.95
DDX54-202ENST00000314045 NF1P21359 2839 aa9.1□□□□□ -0.95
DDX54-202ENST00000314045 C16orf90A8MZG2 172 aa9.09□□□□□ -0.95
DDX54-202ENST00000314045 CHTF8P0CG12 524 aa9.09□□□□□ -0.95
DDX54-202ENST00000314045 C15orf56Q8N910 161 aa9.09□□□□□ -0.95
DDX54-202ENST00000314045 IMUPQ9GZP8 106 aa9.09□□□□□ -0.95
DDX54-202ENST00000314045 VPREB1P12018 145 aa9.09□□□□□ -0.95
DDX54-202ENST00000314045 RTL8CO15255 209 aa9.08□□□□□ -0.96
DDX54-202ENST00000314045 PHF5AQ7RTV0 110 aaKnown RBP9.07□□□□□ -0.96
DDX54-202ENST00000314045 Q6JHZ5 121 aa9.06□□□□□ -0.96
DDX54-202ENST00000314045 NIPBLQ6KC79 2804 aaeCLIP9.06□□□□□ -0.96
DDX54-202ENST00000314045 ELOF1P60002 83 aaKnown RBP9.05□□□□□ -0.96
DDX54-202ENST00000314045 APLNQ9ULZ1 77 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms