RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 LEPROTL1O95214 131 aa8.64□□□□□ -1.03
PPP1CA-201ENST00000312989 RPL28P46779 137 aaKnown RBP8.64□□□□□ -1.03
PPP1CA-201ENST00000312989 TMEM238C9JI98 176 aa8.63□□□□□ -1.03
PPP1CA-201ENST00000312989 M0R378 163 aa8.63□□□□□ -1.03
PPP1CA-201ENST00000312989 SMIM13P0DJ93 91 aa8.62□□□□□ -1.03
PPP1CA-201ENST00000312989 TMEM126AQ9H061 195 aa8.62□□□□□ -1.03
PPP1CA-201ENST00000312989 A0A0U1RRA0 63 aa8.61□□□□□ -1.03
PPP1CA-201ENST00000312989 H0Y8G0 127 aa8.61□□□□□ -1.03
PPP1CA-201ENST00000312989 LINC00158P58513 81 aa8.61□□□□□ -1.03
PPP1CA-201ENST00000312989 RPL13AP40429 203 aaKnown RBP8.61□□□□□ -1.03
PPP1CA-201ENST00000312989 PRLHP81277 87 aa8.61□□□□□ -1.03
PPP1CA-201ENST00000312989 RPL24P83731 157 aaKnown RBP8.61□□□□□ -1.03
PPP1CA-201ENST00000312989 ANAPC11Q9NYG5 84 aa8.61□□□□□ -1.03
PPP1CA-201ENST00000312989 HIST1H2BKO60814 126 aa8.6□□□□□ -1.03
PPP1CA-201ENST00000312989 HIST1H2BJP06899 126 aa8.6□□□□□ -1.03
PPP1CA-201ENST00000312989 FABP4P15090 132 aa8.6□□□□□ -1.03
PPP1CA-201ENST00000312989 HIST1H2BOP23527 126 aa8.6□□□□□ -1.03
PPP1CA-201ENST00000312989 HIST1H2BBP33778 126 aa8.6□□□□□ -1.03
PPP1CA-201ENST00000312989 HIST1H2BDP58876 126 aa8.6□□□□□ -1.03
PPP1CA-201ENST00000312989 HIST1H2BCP62807 126 aa8.6□□□□□ -1.03
PPP1CA-201ENST00000312989 HIST2H2BEQ16778 126 aa8.6□□□□□ -1.03
PPP1CA-201ENST00000312989 KRTAP13-2Q52LG2 175 aa8.6□□□□□ -1.03
PPP1CA-201ENST00000312989 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.6□□□□□ -1.03
PPP1CA-201ENST00000312989 MIR7-3HGQ8N6C7 128 aa8.6□□□□□ -1.03
PPP1CA-201ENST00000312989 HIST1H2BHQ93079 126 aa8.6□□□□□ -1.03
PPP1CA-201ENST00000312989 HIST1H2BNQ99877 126 aa8.6□□□□□ -1.03
PPP1CA-201ENST00000312989 HIST1H2BMQ99879 126 aa8.6□□□□□ -1.03
PPP1CA-201ENST00000312989 PMCHL2Q9BQD1 86 aa8.6□□□□□ -1.03
PPP1CA-201ENST00000312989 NDUFA12Q9UI09 145 aa8.6□□□□□ -1.03
PPP1CA-201ENST00000312989 HERV-K104P63124 156 aa8.59□□□□□ -1.03
PPP1CA-201ENST00000312989 HSPB8Q9UJY1 196 aa8.59□□□□□ -1.03
PPP1CA-201ENST00000312989 LEPROTO15243 131 aa8.58□□□□□ -1.04
PPP1CA-201ENST00000312989 PLNP26678 52 aa8.58□□□□□ -1.04
PPP1CA-201ENST00000312989 LOC107984156A0A0G2JMH3 177 aa8.57□□□□□ -1.04
PPP1CA-201ENST00000312989 UBE2AP49459 152 aa8.57□□□□□ -1.04
PPP1CA-201ENST00000312989 ARL17AQ8IVW1 177 aa8.57□□□□□ -1.04
PPP1CA-201ENST00000312989 DPM2O94777 84 aa8.56□□□□□ -1.04
PPP1CA-201ENST00000312989 SPRR1AP35321 89 aa8.56□□□□□ -1.04
PPP1CA-201ENST00000312989 MYMXA0A1B0GTQ4 84 aa8.55□□□□□ -1.04
PPP1CA-201ENST00000312989 KRTAP4-16G5E9R7 235 aaPredicted RBP8.55□□□□□ -1.04
PPP1CA-201ENST00000312989 J3QQQ9 107 aa8.55□□□□□ -1.04
PPP1CA-201ENST00000312989 IGKCP01834 107 aa8.55□□□□□ -1.04
PPP1CA-201ENST00000312989 MEIG1Q5JSS6 88 aa8.55□□□□□ -1.04
PPP1CA-201ENST00000312989 FAM19A1Q7Z5A9 133 aa8.55□□□□□ -1.04
PPP1CA-201ENST00000312989 BOD1L2Q8IYS8 172 aa8.55□□□□□ -1.04
PPP1CA-201ENST00000312989 CRYGAP11844 174 aa8.54□□□□□ -1.04
PPP1CA-201ENST00000312989 DAND5Q8N907 189 aa8.54□□□□□ -1.04
PPP1CA-201ENST00000312989 PLEKHB2Q96CS7 222 aa8.54□□□□□ -1.04
PPP1CA-201ENST00000312989 FAM229BQ4G0N7 80 aa8.53□□□□□ -1.04
PPP1CA-201ENST00000312989 IGKV2D-26A0A0A0MRZ7 120 aa8.52□□□□□ -1.05
PPP1CA-201ENST00000312989 NCR3O14931 201 aa8.52□□□□□ -1.05
PPP1CA-201ENST00000312989 EIF4EBP3O60516 100 aaPredicted RBP8.52□□□□□ -1.05
PPP1CA-201ENST00000312989 KCNQ1DNQ9H478 68 aa8.52□□□□□ -1.05
PPP1CA-201ENST00000312989 SYS1-DBNDD2H3BUS1 97 aa8.51□□□□□ -1.05
PPP1CA-201ENST00000312989 PRYO14603 147 aa8.51□□□□□ -1.05
PPP1CA-201ENST00000312989 COA6Q5JTJ3 125 aaKnown RBP8.51□□□□□ -1.05
PPP1CA-201ENST00000312989 SOSTDC1Q6X4U4 206 aa8.51□□□□□ -1.05
PPP1CA-201ENST00000312989 MAP1LC3CQ9BXW4 147 aa8.51□□□□□ -1.05
PPP1CA-201ENST00000312989 TRBV10-3A0A0K0K1G6 114 aa8.5□□□□□ -1.05
PPP1CA-201ENST00000312989 LINC00587B1AMM8 73 aa8.5□□□□□ -1.05
PPP1CA-201ENST00000312989 E9PLD3 99 aa8.5□□□□□ -1.05
PPP1CA-201ENST00000312989 NMUP48645 174 aa8.5□□□□□ -1.05
PPP1CA-201ENST00000312989 LINC01545Q5VT33 79 aa8.5□□□□□ -1.05
PPP1CA-201ENST00000312989 TYMSOSQ8TAI1 123 aa8.5□□□□□ -1.05
PPP1CA-201ENST00000312989 MUC2Q02817 5179 aa8.5□□□□□ -1.05
PPP1CA-201ENST00000312989 HERVK_113P61574 105 aa8.49□□□□□ -1.05
PPP1CA-201ENST00000312989 ADAMTSL4-AS1Q5T5F5 129 aa8.49□□□□□ -1.05
PPP1CA-201ENST00000312989 LINC00337Q8N6G1 96 aa8.49□□□□□ -1.05
PPP1CA-201ENST00000312989 A0A0J9YXY3 114 aa8.48□□□□□ -1.05
PPP1CA-201ENST00000312989 SPRR4Q96PI1 79 aa8.48□□□□□ -1.05
PPP1CA-201ENST00000312989 LITAFQ99732 161 aa8.48□□□□□ -1.05
PPP1CA-201ENST00000312989 ATP6V1G1O75348 118 aa8.48□□□□□ -1.05
PPP1CA-201ENST00000312989 HIGD2AQ9BW72 106 aa8.48□□□□□ -1.05
PPP1CA-201ENST00000312989 TRBV10-2A0A0K0K1G8 114 aa8.47□□□□□ -1.05
PPP1CA-201ENST00000312989 TSPAN13O95857 204 aa8.47□□□□□ -1.05
PPP1CA-201ENST00000312989 LGALS3P17931 250 aaKnown RBP8.47□□□□□ -1.05
PPP1CA-201ENST00000312989 C3orf22Q8N5N4 141 aa8.47□□□□□ -1.05
PPP1CA-201ENST00000312989 SMCR5Q8TEV8 140 aa8.47□□□□□ -1.05
PPP1CA-201ENST00000312989 C3orf79P0CE67 100 aa8.46□□□□□ -1.06
PPP1CA-201ENST00000312989 NDUFC2O95298 119 aa8.45□□□□□ -1.06
PPP1CA-201ENST00000312989 PET117Q6UWS5 81 aa8.45□□□□□ -1.06
PPP1CA-201ENST00000312989 B5MCH6 92 aa8.44□□□□□ -1.06
PPP1CA-201ENST00000312989 IGLV6-57P01721 117 aa8.44□□□□□ -1.06
PPP1CA-201ENST00000312989 SPANXB1Q9NS25 103 aaPredicted RBP8.44□□□□□ -1.06
PPP1CA-201ENST00000312989 PRR4Q16378 134 aa8.43□□□□□ -1.06
PPP1CA-201ENST00000312989 LINC00304Q8N9R0 145 aa8.43□□□□□ -1.06
PPP1CA-201ENST00000312989 TTTY13Q9BZ97 58 aa8.43□□□□□ -1.06
PPP1CA-201ENST00000312989 MUC17Q685J3 4493 aa8.43□□□□□ -1.06
PPP1CA-201ENST00000312989 ERC2-IT1O76042 136 aa8.42□□□□□ -1.06
PPP1CA-201ENST00000312989 DDTP30046 118 aa8.42□□□□□ -1.06
PPP1CA-201ENST00000312989 Q9BRP9 147 aa8.42□□□□□ -1.06
PPP1CA-201ENST00000312989 LINC00483Q53H64 154 aa8.41□□□□□ -1.06
PPP1CA-201ENST00000312989 NPC2P61916 151 aa8.4□□□□□ -1.06
PPP1CA-201ENST00000312989 ETDCA0A1B0GVM5 59 aa8.39□□□□□ -1.07
PPP1CA-201ENST00000312989 TIMM17BO60830 172 aa8.39□□□□□ -1.07
PPP1CA-201ENST00000312989 Q6ZRX8 168 aa8.38□□□□□ -1.07
PPP1CA-201ENST00000312989 LINC00308Q8TCZ7 52 aa8.38□□□□□ -1.07
PPP1CA-201ENST00000312989 RETNLBQ9BQ08 111 aa8.38□□□□□ -1.07
PPP1CA-201ENST00000312989 MIEN1Q9BRT3 115 aa8.38□□□□□ -1.07
PPP1CA-201ENST00000312989 CTAG1AP78358 180 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms