RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 OR13C6PQ8NH95 151 aa14.1□□□□□ -0.15
ATG4D-201ENST00000309469 SMIM11BQ8TCY0 68 aa14.09□□□□□ -0.15
ATG4D-201ENST00000309469 H3BT86 120 aa14.09□□□□□ -0.15
ATG4D-201ENST00000309469 PRR3P79522 188 aaKnown RBP14.09□□□□□ -0.15
ATG4D-201ENST00000309469 APLNQ9ULZ1 77 aa14.08□□□□□ -0.16
ATG4D-201ENST00000309469 Q6ZRU5 148 aa14.07□□□□□ -0.16
ATG4D-201ENST00000309469 F8WDY8 70 aa14.06□□□□□ -0.16
ATG4D-201ENST00000309469 STAB2Q8WWQ8 2551 aa14.06□□□□□ -0.16
ATG4D-201ENST00000309469 Q8NDZ9 215 aa14.05□□□□□ -0.16
ATG4D-201ENST00000309469 RMI2Q96E14 147 aa14.05□□□□□ -0.16
ATG4D-201ENST00000309469 TRACP01848 142 aa14.04□□□□□ -0.16
ATG4D-201ENST00000309469 FAM218AQ96MZ4 157 aa14.03□□□□□ -0.16
ATG4D-201ENST00000309469 NCR3O14931 201 aa14.01□□□□□ -0.17
ATG4D-201ENST00000309469 SYCNQ0VAF6 134 aa14.01□□□□□ -0.17
ATG4D-201ENST00000309469 CASC10Q5T4H9 136 aa14.01□□□□□ -0.17
ATG4D-201ENST00000309469 TMEM126AQ9H061 195 aa14.01□□□□□ -0.17
ATG4D-201ENST00000309469 UBE2DNLQ8IWF7 75 aa14□□□□□ -0.17
ATG4D-201ENST00000309469 XAGE1AQ9HD64 81 aa14□□□□□ -0.17
ATG4D-201ENST00000309469 H0YGX0 51 aa14□□□□□ -0.17
ATG4D-201ENST00000309469 TEX49A0A1B0GTD5 131 aa13.99□□□□□ -0.17
ATG4D-201ENST00000309469 NUPR2A6NF83 97 aa13.98□□□□□ -0.17
ATG4D-201ENST00000309469 USP17L23D6RBM5 183 aa13.98□□□□□ -0.17
ATG4D-201ENST00000309469 NDUFC2-KCTD14E9PQ53 114 aa13.98□□□□□ -0.17
ATG4D-201ENST00000309469 CDIP1Q9H305 208 aa13.97□□□□□ -0.17
ATG4D-201ENST00000309469 S100A7L2Q5SY68 101 aa13.96□□□□□ -0.17
ATG4D-201ENST00000309469 DNAH1Q9P2D7 4330 aa13.95□□□□□ -0.18
ATG4D-201ENST00000309469 KRTAP1-5Q9BYS1 174 aa13.95□□□□□ -0.18
ATG4D-201ENST00000309469 DYNC2H1Q8NCM8 4307 aaKnown RBP13.95□□□□□ -0.18
ATG4D-201ENST00000309469 A0A087WYN8 130 aa13.94□□□□□ -0.18
ATG4D-201ENST00000309469 RPL18AQ02543 176 aaKnown RBP13.94□□□□□ -0.18
ATG4D-201ENST00000309469 Q6ZRP5 223 aa13.93□□□□□ -0.18
ATG4D-201ENST00000309469 DNAL4O96015 105 aa13.92□□□□□ -0.18
ATG4D-201ENST00000309469 SLPIP03973 132 aa13.92□□□□□ -0.18
ATG4D-201ENST00000309469 BAALC-AS2P0C853 105 aa13.92□□□□□ -0.18
ATG4D-201ENST00000309469 GAGE2EQ4V326 116 aa13.92□□□□□ -0.18
ATG4D-201ENST00000309469 GAGE2DQ9UEU5 116 aa13.92□□□□□ -0.18
ATG4D-201ENST00000309469 IGLV6-57P01721 117 aa13.92□□□□□ -0.18
ATG4D-201ENST00000309469 MEGF8Q7Z7M0 2845 aa13.9□□□□□ -0.18
ATG4D-201ENST00000309469 DNHD1Q96M86 4753 aa13.9□□□□□ -0.18
ATG4D-201ENST00000309469 LECT2O14960 151 aa13.9□□□□□ -0.18
ATG4D-201ENST00000309469 VPREB1P12018 145 aa13.89□□□□□ -0.19
ATG4D-201ENST00000309469 KRTAP21-3Q3LHN1 58 aa13.89□□□□□ -0.19
ATG4D-201ENST00000309469 A0A1B0GV72 72 aa13.88□□□□□ -0.19
ATG4D-201ENST00000309469 TLX1NBP0CAT3 122 aa13.88□□□□□ -0.19
ATG4D-201ENST00000309469 C6orf99Q4VX62 202 aa13.87□□□□□ -0.19
ATG4D-201ENST00000309469 TRBV10-3A0A0K0K1G6 114 aa13.86□□□□□ -0.19
ATG4D-201ENST00000309469 C9orf129Q5T035 196 aaKnown RBP13.86□□□□□ -0.19
ATG4D-201ENST00000309469 C22orf24Q9Y442 160 aa13.84□□□□□ -0.19
ATG4D-201ENST00000309469 M0R378 163 aa13.84□□□□□ -0.19
ATG4D-201ENST00000309469 A0A1B0GX51 115 aa13.83□□□□□ -0.2
ATG4D-201ENST00000309469 PRKDCP78527 4128 aaKnown RBP13.83□□□□□ -0.2
ATG4D-201ENST00000309469 PSCAO43653 123 aa13.82□□□□□ -0.2
ATG4D-201ENST00000309469 XGP55808 180 aa13.82□□□□□ -0.2
ATG4D-201ENST00000309469 CSMD3Q7Z407 3707 aa13.82□□□□□ -0.2
ATG4D-201ENST00000309469 TRAV23DV6A0A075B6W5 121 aa13.81□□□□□ -0.2
ATG4D-201ENST00000309469 NBDYA0A0U1RRE5 68 aa13.8□□□□□ -0.2
ATG4D-201ENST00000309469 TTC32Q5I0X7 151 aa13.8□□□□□ -0.2
ATG4D-201ENST00000309469 Q8N814 137 aa13.8□□□□□ -0.2
ATG4D-201ENST00000309469 MT-ATP8P03928 68 aa13.8□□□□□ -0.2
ATG4D-201ENST00000309469 LINC00167Q96N53 147 aa13.78□□□□□ -0.2
ATG4D-201ENST00000309469 ORMDL1Q9P0S3 153 aa13.78□□□□□ -0.2
ATG4D-201ENST00000309469 LYSTQ99698 3801 aa13.78□□□□□ -0.2
ATG4D-201ENST00000309469 FAM240AA0A1B0GVK7 77 aa13.77□□□□□ -0.21
ATG4D-201ENST00000309469 LINC00575Q6W349 94 aa13.77□□□□□ -0.21
ATG4D-201ENST00000309469 PLA2G2DQ9UNK4 145 aa13.77□□□□□ -0.21
ATG4D-201ENST00000309469 SERTAD4-AS1Q5TG53 156 aa13.76□□□□□ -0.21
ATG4D-201ENST00000309469 DIRC1Q969H9 104 aa13.76□□□□□ -0.21
ATG4D-201ENST00000309469 PLECQ15149 4684 aaKnown RBP13.76□□□□□ -0.21
ATG4D-201ENST00000309469 ZNF73O43830 326 aaPredicted RBP13.76□□□□□ -0.21
ATG4D-201ENST00000309469 SNCGO76070 127 aa13.76□□□□□ -0.21
ATG4D-201ENST00000309469 INAFM2P0DMQ5 153 aa13.76□□□□□ -0.21
ATG4D-201ENST00000309469 LOC107984640A0A0U1RRK4 108 aa13.75□□□□□ -0.21
ATG4D-201ENST00000309469 GAGE2BQ13066 116 aa13.75□□□□□ -0.21
ATG4D-201ENST00000309469 NKAPP1Q8N9T2 125 aa13.74□□□□□ -0.21
ATG4D-201ENST00000309469 CNBPP62633 177 aaKnown RBP13.73□□□□□ -0.21
ATG4D-201ENST00000309469 C14orf177Q52M58 125 aa13.72□□□□□ -0.21
ATG4D-201ENST00000309469 DNAH7Q8WXX0 4024 aa13.72□□□□□ -0.21
ATG4D-201ENST00000309469 TENM2Q9NT68 2774 aa13.72□□□□□ -0.21
ATG4D-201ENST00000309469 hADV29S1A0JD25 119 aa13.72□□□□□ -0.21
ATG4D-201ENST00000309469 TRBV7-6A0A0J9YX20 115 aa13.71□□□□□ -0.21
ATG4D-201ENST00000309469 COX7BP24311 80 aa13.7□□□□□ -0.22
ATG4D-201ENST00000309469 C7orf33Q8WU49 177 aa13.7□□□□□ -0.22
ATG4D-201ENST00000309469 IGLV5-37A0A075B6J1 123 aa13.7□□□□□ -0.22
ATG4D-201ENST00000309469 FAM168BA1KXE4 195 aa13.7□□□□□ -0.22
ATG4D-201ENST00000309469 ACYP1P07311 99 aa13.7□□□□□ -0.22
ATG4D-201ENST00000309469 OBSCN-AS1Q96MR7 158 aa13.69□□□□□ -0.22
ATG4D-201ENST00000309469 ELOF1P60002 83 aaKnown RBP13.68□□□□□ -0.22
ATG4D-201ENST00000309469 Q6Q795 121 aa13.68□□□□□ -0.22
ATG4D-201ENST00000309469 TMEM256-PLSCR3K7ERE1 68 aa13.68□□□□□ -0.22
ATG4D-201ENST00000309469 Q6ZRN7 208 aaPredicted RBP13.68□□□□□ -0.22
ATG4D-201ENST00000309469 LRCOL1A6NCL2 159 aa13.67□□□□□ -0.22
ATG4D-201ENST00000309469 DNAH10Q8IVF4 4471 aa13.67□□□□□ -0.22
ATG4D-201ENST00000309469 KRTAP7-1Q8IUC3 87 aa13.66□□□□□ -0.22
ATG4D-201ENST00000309469 KCNQ1DNQ9H478 68 aa13.66□□□□□ -0.22
ATG4D-201ENST00000309469 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.66□□□□□ -0.22
ATG4D-201ENST00000309469 STARD9Q9P2P6 4700 aa13.65□□□□□ -0.22
ATG4D-201ENST00000309469 M0R2N4 97 aa13.65□□□□□ -0.22
ATG4D-201ENST00000309469 C14orf132Q9NPU4 83 aa13.65□□□□□ -0.22
ATG4D-201ENST00000309469 VPS13DQ5THJ4 4388 aa13.63□□□□□ -0.23
ATG4D-201ENST00000309469 GAGE2AQ6NT46 116 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms