RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 SCGB1A1P11684 91 aa14.95□□□□□ -0.02
PDLIM2-202ENST00000308354 CDIP1Q9H305 208 aa14.95□□□□□ -0.02
PDLIM2-202ENST00000308354 TRACP01848 142 aa14.94□□□□□ -0.02
PDLIM2-202ENST00000308354 PRKDCP78527 4128 aaKnown RBP14.93□□□□□ -0.02
PDLIM2-202ENST00000308354 C15orf56Q8N910 161 aa14.93□□□□□ -0.02
PDLIM2-202ENST00000308354 ZNF561-AS1K7EIQ3 104 aa14.92□□□□□ -0.02
PDLIM2-202ENST00000308354 CSMD3Q7Z407 3707 aa14.91□□□□□ -0.02
PDLIM2-202ENST00000308354 Q8NDZ9 215 aa14.9□□□□□ -0.02
PDLIM2-202ENST00000308354 C6orf48Q9UBA6 75 aa14.9□□□□□ -0.02
PDLIM2-202ENST00000308354 TENM2Q9NT68 2774 aa14.9□□□□□ -0.02
PDLIM2-202ENST00000308354 NDUFC2O95298 119 aa14.89□□□□□ -0.03
PDLIM2-202ENST00000308354 A0A087WYN8 130 aa14.89□□□□□ -0.03
PDLIM2-202ENST00000308354 CAMK2N2Q96S95 79 aa14.88□□□□□ -0.03
PDLIM2-202ENST00000308354 UPK3BQ9BT76 320 aa14.88□□□□□ -0.03
PDLIM2-202ENST00000308354 NHLRC4P0CG21 123 aaPredicted RBP14.88□□□□□ -0.03
PDLIM2-202ENST00000308354 APLNQ9ULZ1 77 aa14.87□□□□□ -0.03
PDLIM2-202ENST00000308354 CASC10Q5T4H9 136 aa14.86□□□□□ -0.03
PDLIM2-202ENST00000308354 BAALC-AS2P0C853 105 aa14.86□□□□□ -0.03
PDLIM2-202ENST00000308354 H0YGX0 51 aa14.85□□□□□ -0.03
PDLIM2-202ENST00000308354 NCR3O14931 201 aa14.85□□□□□ -0.03
PDLIM2-202ENST00000308354 GVQW2A0A096LPI5 108 aaPredicted RBP14.85□□□□□ -0.03
PDLIM2-202ENST00000308354 Q6ZRU5 148 aa14.84□□□□□ -0.03
PDLIM2-202ENST00000308354 XGP55808 180 aa14.82□□□□□ -0.04
PDLIM2-202ENST00000308354 UBE2DNLQ8IWF7 75 aa14.82□□□□□ -0.04
PDLIM2-202ENST00000308354 MUC7Q8TAX7 377 aa14.82□□□□□ -0.04
PDLIM2-202ENST00000308354 C22orf24Q9Y442 160 aa14.82□□□□□ -0.04
PDLIM2-202ENST00000308354 TMEM126AQ9H061 195 aa14.82□□□□□ -0.04
PDLIM2-202ENST00000308354 DNAL4O96015 105 aa14.81□□□□□ -0.04
PDLIM2-202ENST00000308354 LECT2O14960 151 aa14.81□□□□□ -0.04
PDLIM2-202ENST00000308354 KRTAP1-5Q9BYS1 174 aa14.81□□□□□ -0.04
PDLIM2-202ENST00000308354 XAGE1AQ9HD64 81 aa14.81□□□□□ -0.04
PDLIM2-202ENST00000308354 DNAH1Q9P2D7 4330 aa14.8□□□□□ -0.04
PDLIM2-202ENST00000308354 MT-ATP8P03928 68 aa14.8□□□□□ -0.04
PDLIM2-202ENST00000308354 C2orf48Q96LS8 159 aa14.78□□□□□ -0.04
PDLIM2-202ENST00000308354 DNAH7Q8WXX0 4024 aa14.78□□□□□ -0.04
PDLIM2-202ENST00000308354 S100A7L2Q5SY68 101 aa14.77□□□□□ -0.05
PDLIM2-202ENST00000308354 DYNC2H1Q8NCM8 4307 aaKnown RBP14.77□□□□□ -0.05
PDLIM2-202ENST00000308354 USP17L23D6RBM5 183 aa14.76□□□□□ -0.05
PDLIM2-202ENST00000308354 PLECQ15149 4684 aaKnown RBP14.75□□□□□ -0.05
PDLIM2-202ENST00000308354 NUPR2A6NF83 97 aa14.74□□□□□ -0.05
PDLIM2-202ENST00000308354 RPL18AQ02543 176 aaKnown RBP14.74□□□□□ -0.05
PDLIM2-202ENST00000308354 SLPIP03973 132 aa14.74□□□□□ -0.05
PDLIM2-202ENST00000308354 SYCNQ0VAF6 134 aa14.74□□□□□ -0.05
PDLIM2-202ENST00000308354 RMI2Q96E14 147 aa14.74□□□□□ -0.05
PDLIM2-202ENST00000308354 A0A1B0GV72 72 aa14.73□□□□□ -0.05
PDLIM2-202ENST00000308354 GAGE2EQ4V326 116 aa14.73□□□□□ -0.05
PDLIM2-202ENST00000308354 C6orf99Q4VX62 202 aa14.73□□□□□ -0.05
PDLIM2-202ENST00000308354 GAGE2DQ9UEU5 116 aa14.73□□□□□ -0.05
PDLIM2-202ENST00000308354 NDUFC2-KCTD14E9PQ53 114 aa14.7□□□□□ -0.06
PDLIM2-202ENST00000308354 FAM240AA0A1B0GVK7 77 aa14.69□□□□□ -0.06
PDLIM2-202ENST00000308354 IGLV6-57P01721 117 aa14.69□□□□□ -0.06
PDLIM2-202ENST00000308354 Q6ZRP5 223 aa14.69□□□□□ -0.06
PDLIM2-202ENST00000308354 DNAH10Q8IVF4 4471 aa14.69□□□□□ -0.06
PDLIM2-202ENST00000308354 C9orf129Q5T035 196 aaKnown RBP14.69□□□□□ -0.06
PDLIM2-202ENST00000308354 STARD9Q9P2P6 4700 aa14.69□□□□□ -0.06
PDLIM2-202ENST00000308354 Q8N814 137 aa14.68□□□□□ -0.06
PDLIM2-202ENST00000308354 FBN3Q75N90 2809 aa14.67□□□□□ -0.06
PDLIM2-202ENST00000308354 ORMDL1Q9P0S3 153 aa14.66□□□□□ -0.06
PDLIM2-202ENST00000308354 TRBV10-3A0A0K0K1G6 114 aa14.65□□□□□ -0.06
PDLIM2-202ENST00000308354 LINC00167Q96N53 147 aa14.65□□□□□ -0.06
PDLIM2-202ENST00000308354 KRTAP21-3Q3LHN1 58 aa14.65□□□□□ -0.06
PDLIM2-202ENST00000308354 A0A1B0GX51 115 aa14.64□□□□□ -0.07
PDLIM2-202ENST00000308354 F8WDY8 70 aa14.64□□□□□ -0.07
PDLIM2-202ENST00000308354 INAFM2P0DMQ5 153 aa14.64□□□□□ -0.07
PDLIM2-202ENST00000308354 VPREB1P12018 145 aa14.62□□□□□ -0.07
PDLIM2-202ENST00000308354 PSCAO43653 123 aa14.62□□□□□ -0.07
PDLIM2-202ENST00000308354 SNCGO76070 127 aa14.61□□□□□ -0.07
PDLIM2-202ENST00000308354 TTC32Q5I0X7 151 aa14.61□□□□□ -0.07
PDLIM2-202ENST00000308354 LINC00575Q6W349 94 aa14.61□□□□□ -0.07
PDLIM2-202ENST00000308354 C14orf132Q9NPU4 83 aa14.6□□□□□ -0.07
PDLIM2-202ENST00000308354 TRAV23DV6A0A075B6W5 121 aa14.6□□□□□ -0.07
PDLIM2-202ENST00000308354 OBSCN-AS1Q96MR7 158 aa14.6□□□□□ -0.07
PDLIM2-202ENST00000308354 ACYP1P07311 99 aa14.58□□□□□ -0.07
PDLIM2-202ENST00000308354 NBDYA0A0U1RRE5 68 aa14.58□□□□□ -0.08
PDLIM2-202ENST00000308354 GAGE2AQ6NT46 116 aa14.58□□□□□ -0.08
PDLIM2-202ENST00000308354 TGP01266 2768 aa14.58□□□□□ -0.08
PDLIM2-202ENST00000308354 hADV29S1A0JD25 119 aa14.55□□□□□ -0.08
PDLIM2-202ENST00000308354 M0R2N4 97 aa14.55□□□□□ -0.08
PDLIM2-202ENST00000308354 DIRC1Q969H9 104 aa14.55□□□□□ -0.08
PDLIM2-202ENST00000308354 ZNF73O43830 326 aaPredicted RBP14.54□□□□□ -0.08
PDLIM2-202ENST00000308354 M0R378 163 aa14.54□□□□□ -0.08
PDLIM2-202ENST00000308354 SMCR5Q8TEV8 140 aa14.54□□□□□ -0.08
PDLIM2-202ENST00000308354 TMEM256-PLSCR3K7ERE1 68 aa14.53□□□□□ -0.08
PDLIM2-202ENST00000308354 TLX1NBP0CAT3 122 aa14.53□□□□□ -0.08
PDLIM2-202ENST00000308354 GAGE2BQ13066 116 aa14.53□□□□□ -0.08
PDLIM2-202ENST00000308354 SERTAD4-AS1Q5TG53 156 aa14.53□□□□□ -0.08
PDLIM2-202ENST00000308354 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.51□□□□□ -0.09
PDLIM2-202ENST00000308354 FAM168BA1KXE4 195 aa14.51□□□□□ -0.09
PDLIM2-202ENST00000308354 VPS13DQ5THJ4 4388 aa14.48□□□□□ -0.09
PDLIM2-202ENST00000308354 COX7BP24311 80 aa14.47□□□□□ -0.09
PDLIM2-202ENST00000308354 SDIM1Q6ZPB5 146 aa14.47□□□□□ -0.09
PDLIM2-202ENST00000308354 Q6ZQY7 126 aa14.47□□□□□ -0.09
PDLIM2-202ENST00000308354 ELOF1P60002 83 aaKnown RBP14.46□□□□□ -0.09
PDLIM2-202ENST00000308354 NKAPP1Q8N9T2 125 aa14.46□□□□□ -0.09
PDLIM2-202ENST00000308354 JMJD7-PLA2G4BH0Y9G9 81 aa14.45□□□□□ -0.1
PDLIM2-202ENST00000308354 LOC107984640A0A0U1RRK4 108 aa14.45□□□□□ -0.1
PDLIM2-202ENST00000308354 Q6ZRN7 208 aaPredicted RBP14.44□□□□□ -0.1
PDLIM2-202ENST00000308354 Q6Q795 121 aa14.43□□□□□ -0.1
PDLIM2-202ENST00000308354 KRTAP7-1Q8IUC3 87 aa14.43□□□□□ -0.1
PDLIM2-202ENST00000308354 TRBV7-6A0A0J9YX20 115 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms