RNA–Protein interactions for RNA: ENST00000306320.9

RETREG1-201, Transcript of reticulophagy regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG1, Length 3,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-201ENST00000306320 TMEM256-PLSCR3K7ERE1 68 aa12.43□□□□□ -0.42
RETREG1-201ENST00000306320 PRB2P02812 416 aaPredicted RBP12.43□□□□□ -0.42
RETREG1-201ENST00000306320 TRBV10-1A0A0K0K1A3 114 aa12.42□□□□□ -0.42
RETREG1-201ENST00000306320 NDUFC2O95298 119 aa12.42□□□□□ -0.42
RETREG1-201ENST00000306320 Q8N3U1 123 aa12.41□□□□□ -0.42
RETREG1-201ENST00000306320 Q8N9L7 120 aa12.41□□□□□ -0.42
RETREG1-201ENST00000306320 TRBV6-8A0A0A6YYG3 113 aa12.4□□□□□ -0.42
RETREG1-201ENST00000306320 LINC00959A0A1B0GUT2 108 aa12.4□□□□□ -0.42
RETREG1-201ENST00000306320 J3QKU1 62 aa12.4□□□□□ -0.42
RETREG1-201ENST00000306320 KRTAP10-3P60369 221 aa12.4□□□□□ -0.42
RETREG1-201ENST00000306320 F8P00451 2351 aa12.4□□□□□ -0.42
RETREG1-201ENST00000306320 NSD1Q96L73 2696 aaPredicted RBP12.39□□□□□ -0.43
RETREG1-201ENST00000306320 GYPEP15421 78 aa12.38□□□□□ -0.43
RETREG1-201ENST00000306320 Q6ZQY7 126 aa12.38□□□□□ -0.43
RETREG1-201ENST00000306320 A0A087WZ39 114 aa12.37□□□□□ -0.43
RETREG1-201ENST00000306320 INAFM1C9JVW0 142 aa12.37□□□□□ -0.43
RETREG1-201ENST00000306320 LRCOL1A6NCL2 159 aa12.36□□□□□ -0.43
RETREG1-201ENST00000306320 ANGP03950 147 aaKnown RBP12.36□□□□□ -0.43
RETREG1-201ENST00000306320 LINC01547P58512 204 aaPredicted RBP12.36□□□□□ -0.43
RETREG1-201ENST00000306320 H7BZZ5 65 aa12.36□□□□□ -0.43
RETREG1-201ENST00000306320 OBSCN-AS1Q96MR7 158 aa12.36□□□□□ -0.43
RETREG1-201ENST00000306320 TM2D3Q9BRN9 247 aa12.36□□□□□ -0.43
RETREG1-201ENST00000306320 HTN3P15516 51 aa12.35□□□□□ -0.43
RETREG1-201ENST00000306320 XAGE1AQ9HD64 81 aa12.35□□□□□ -0.43
RETREG1-201ENST00000306320 LY6G6DO95868 133 aa12.34□□□□□ -0.43
RETREG1-201ENST00000306320 Q6ZVQ6 151 aa12.34□□□□□ -0.43
RETREG1-201ENST00000306320 C6orf223Q8N319 242 aa12.34□□□□□ -0.43
RETREG1-201ENST00000306320 STAB1Q9NY15 2570 aa12.34□□□□□ -0.43
RETREG1-201ENST00000306320 PLAC8L1A1L4L8 177 aa12.32□□□□□ -0.44
RETREG1-201ENST00000306320 IGLV1-51P01701 117 aa12.32□□□□□ -0.44
RETREG1-201ENST00000306320 NANOS2P60321 138 aaKnown RBP12.32□□□□□ -0.44
RETREG1-201ENST00000306320 NOTCH1P46531 2555 aa12.32□□□□□ -0.44
RETREG1-201ENST00000306320 DEFB135Q30KP9 77 aa12.31□□□□□ -0.44
RETREG1-201ENST00000306320 C19orf73Q9NVV2 129 aa12.31□□□□□ -0.44
RETREG1-201ENST00000306320 SERP1Q9Y6X1 66 aa12.31□□□□□ -0.44
RETREG1-201ENST00000306320 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.31□□□□□ -0.44
RETREG1-201ENST00000306320 PKD1L1Q8TDX9 2849 aa12.3□□□□□ -0.44
RETREG1-201ENST00000306320 TRAV7A0A075B6U4 112 aa12.3□□□□□ -0.44
RETREG1-201ENST00000306320 Q8NDZ9 215 aa12.3□□□□□ -0.44
RETREG1-201ENST00000306320 ATP5EP2Q5VTU8 51 aa12.29□□□□□ -0.44
RETREG1-201ENST00000306320 LYPD5Q6UWN5 251 aa12.29□□□□□ -0.44
RETREG1-201ENST00000306320 MAST4O15021 2626 aa12.29□□□□□ -0.44
RETREG1-201ENST00000306320 IGHV4-28A0A0C4DH34 117 aa12.28□□□□□ -0.44
RETREG1-201ENST00000306320 WIPF1O43516 503 aa12.28□□□□□ -0.44
RETREG1-201ENST00000306320 UNQ6190/PRO20217Q6UXQ8 127 aa12.28□□□□□ -0.44
RETREG1-201ENST00000306320 FAM19A3Q7Z5A8 133 aa12.28□□□□□ -0.44
RETREG1-201ENST00000306320 TRBV7-6A0A0J9YX20 115 aa12.28□□□□□ -0.44
RETREG1-201ENST00000306320 C16orf74Q96GX8 76 aa12.27□□□□□ -0.45
RETREG1-201ENST00000306320 PRO0628Q9UI54 55 aa12.26□□□□□ -0.45
RETREG1-201ENST00000306320 FBN1P35555 2871 aaKnown RBP12.26□□□□□ -0.45
RETREG1-201ENST00000306320 C10orf25Q5T742 122 aa12.26□□□□□ -0.45
RETREG1-201ENST00000306320 Q6ZQT0 140 aa12.26□□□□□ -0.45
RETREG1-201ENST00000306320 CHCHD10Q8WYQ3 142 aaPredicted RBP12.25□□□□□ -0.45
RETREG1-201ENST00000306320 FP248Q71RG6 208 aaPredicted RBP12.25□□□□□ -0.45
RETREG1-201ENST00000306320 CSNK1G2-AS1Q8NCQ2 148 aa12.25□□□□□ -0.45
RETREG1-201ENST00000306320 KMT2BQ9UMN6 2715 aaPredicted RBP12.25□□□□□ -0.45
RETREG1-201ENST00000306320 DEFB105AQ8NG35 78 aa12.24□□□□□ -0.45
RETREG1-201ENST00000306320 C3orf84H3BNL1 204 aa12.24□□□□□ -0.45
RETREG1-201ENST00000306320 IL17DQ8TAD2 202 aa12.24□□□□□ -0.45
RETREG1-201ENST00000306320 LINC00575Q6W349 94 aa12.24□□□□□ -0.45
RETREG1-201ENST00000306320 SMIM26A0A096LP01 95 aa12.22□□□□□ -0.45
RETREG1-201ENST00000306320 NDUFC2-KCTD14E9PQ53 114 aa12.22□□□□□ -0.45
RETREG1-201ENST00000306320 ZNF561-AS1K7EIQ3 104 aa12.22□□□□□ -0.45
RETREG1-201ENST00000306320 MIFP14174 115 aa12.22□□□□□ -0.45
RETREG1-201ENST00000306320 CELA1Q9UNI1 258 aa12.22□□□□□ -0.45
RETREG1-201ENST00000306320 PRR4Q16378 134 aa12.22□□□□□ -0.45
RETREG1-201ENST00000306320 Q8IZM0 81 aa12.21□□□□□ -0.45
RETREG1-201ENST00000306320 NREPQ16612 68 aa12.21□□□□□ -0.46
RETREG1-201ENST00000306320 BPY2O14599 106 aa12.2□□□□□ -0.46
RETREG1-201ENST00000306320 SPAG11BQ08648 103 aa12.2□□□□□ -0.46
RETREG1-201ENST00000306320 FAM229BQ4G0N7 80 aa12.19□□□□□ -0.46
RETREG1-201ENST00000306320 TRBV10-3A0A0K0K1G6 114 aa12.19□□□□□ -0.46
RETREG1-201ENST00000306320 REG3AQ06141 175 aa12.19□□□□□ -0.46
RETREG1-201ENST00000306320 C16orf95Q9H693 158 aa12.19□□□□□ -0.46
RETREG1-201ENST00000306320 MUC7Q8TAX7 377 aa12.17□□□□□ -0.46
RETREG1-201ENST00000306320 TMEM254Q8TBM7 123 aa12.16□□□□□ -0.46
RETREG1-201ENST00000306320 KLK12Q9UKR0 248 aa12.16□□□□□ -0.46
RETREG1-201ENST00000306320 NBEAL1Q6ZS30 2694 aa12.16□□□□□ -0.46
RETREG1-201ENST00000306320 HIGD2BQ4VC39 106 aa12.15□□□□□ -0.46
RETREG1-201ENST00000306320 CYSRT1A8MQ03 144 aa12.14□□□□□ -0.47
RETREG1-201ENST00000306320 HIGD2AQ9BW72 106 aa12.13□□□□□ -0.47
RETREG1-201ENST00000306320 KLKP1Q107X0 134 aa12.13□□□□□ -0.47
RETREG1-201ENST00000306320 X6R8D5 127 aa12.13□□□□□ -0.47
RETREG1-201ENST00000306320 FAM30AQ9NZY2 134 aa12.13□□□□□ -0.47
RETREG1-201ENST00000306320 COL6A5A8TX70 2615 aa12.12□□□□□ -0.47
RETREG1-201ENST00000306320 C1orf195Q5TG92 126 aa12.12□□□□□ -0.47
RETREG1-201ENST00000306320 DIRC1Q969H9 104 aa12.12□□□□□ -0.47
RETREG1-201ENST00000306320 TENM3Q9P273 2699 aa12.11□□□□□ -0.47
RETREG1-201ENST00000306320 CD164L2Q6UWJ8 174 aa12.11□□□□□ -0.47
RETREG1-201ENST00000306320 RETNQ9HD89 108 aa12.11□□□□□ -0.47
RETREG1-201ENST00000306320 KIAA0087Q14695 138 aa12.1□□□□□ -0.47
RETREG1-201ENST00000306320 LINC00167Q96N53 147 aa12.1□□□□□ -0.47
RETREG1-201ENST00000306320 OXLD1Q5BKU9 147 aa12.1□□□□□ -0.47
RETREG1-201ENST00000306320 FUSP35637 526 aaKnown RBP eCLIP12.09□□□□□ -0.47
RETREG1-201ENST00000306320 CMC4P56277 68 aaPredicted RBP12.09□□□□□ -0.47
RETREG1-201ENST00000306320 COX7BP24311 80 aa12.08□□□□□ -0.48
RETREG1-201ENST00000306320 PRO0255Q9UI72 69 aa12.07□□□□□ -0.48
RETREG1-201ENST00000306320 ZNF73O43830 326 aaPredicted RBP12.06□□□□□ -0.48
RETREG1-201ENST00000306320 PSPHP1O15172 72 aa12.05□□□□□ -0.48
RETREG1-201ENST00000306320 V9GYY9 64 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms