RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 C10orf25Q5T742 122 aa11.28□□□□□ -0.6
TMEM88-201ENST00000301599 TLX1NBP0CAT3 122 aa11.27□□□□□ -0.61
TMEM88-201ENST00000301599 KIAA0087Q14695 138 aa11.27□□□□□ -0.61
TMEM88-201ENST00000301599 VCX2Q9H322 139 aa11.27□□□□□ -0.61
TMEM88-201ENST00000301599 UBE2D1P51668 147 aa11.26□□□□□ -0.61
TMEM88-201ENST00000301599 VAMP3Q15836 100 aa11.26□□□□□ -0.61
TMEM88-201ENST00000301599 PCP2Q8IVA1 136 aa11.26□□□□□ -0.61
TMEM88-201ENST00000301599 LINC01561Q8N1V8 128 aa11.26□□□□□ -0.61
TMEM88-201ENST00000301599 CST9LQ9H4G1 147 aa11.26□□□□□ -0.61
TMEM88-201ENST00000301599 C6orf48Q9UBA6 75 aa11.26□□□□□ -0.61
TMEM88-201ENST00000301599 MYMXA0A1B0GTQ4 84 aa11.25□□□□□ -0.61
TMEM88-201ENST00000301599 C11orf86A6NJI1 115 aa11.25□□□□□ -0.61
TMEM88-201ENST00000301599 TAX1BP3O14907 124 aa11.25□□□□□ -0.61
TMEM88-201ENST00000301599 PHF5AQ7RTV0 110 aaKnown RBP11.25□□□□□ -0.61
TMEM88-201ENST00000301599 PSORS1C2Q9UIG4 136 aa11.25□□□□□ -0.61
TMEM88-201ENST00000301599 GTF2H5Q6ZYL4 71 aa11.24□□□□□ -0.61
TMEM88-201ENST00000301599 AMELXQ99217 191 aa11.24□□□□□ -0.61
TMEM88-201ENST00000301599 TRBV30A0A0K0K1B3 111 aa11.23□□□□□ -0.61
TMEM88-201ENST00000301599 TMEM238LA0A1B0GVL6 79 aa11.23□□□□□ -0.61
TMEM88-201ENST00000301599 A6NJY4 79 aa11.23□□□□□ -0.61
TMEM88-201ENST00000301599 SMIM13P0DJ93 91 aa11.23□□□□□ -0.61
TMEM88-201ENST00000301599 KRTAP10-8P60410 259 aa11.23□□□□□ -0.61
TMEM88-201ENST00000301599 GAGE2EQ4V326 116 aa11.23□□□□□ -0.61
TMEM88-201ENST00000301599 GAGE2DQ9UEU5 116 aa11.23□□□□□ -0.61
TMEM88-201ENST00000301599 IGKV2D-26A0A0A0MRZ7 120 aa11.22□□□□□ -0.61
TMEM88-201ENST00000301599 C1orf137Q5JT78 98 aa11.22□□□□□ -0.61
TMEM88-201ENST00000301599 CEND1Q8N111 149 aa11.22□□□□□ -0.61
TMEM88-201ENST00000301599 C9orf118A6NHY6 69 aa11.21□□□□□ -0.61
TMEM88-201ENST00000301599 PRSS2P07478 247 aa11.2□□□□□ -0.62
TMEM88-201ENST00000301599 C2orf82Q6UX34 121 aa11.2□□□□□ -0.62
TMEM88-201ENST00000301599 FAM19A3Q7Z5A8 133 aa11.2□□□□□ -0.62
TMEM88-201ENST00000301599 FAM168BA1KXE4 195 aa11.19□□□□□ -0.62
TMEM88-201ENST00000301599 C6orf226Q5I0X4 101 aa11.19□□□□□ -0.62
TMEM88-201ENST00000301599 PLEKHB2Q96CS7 222 aa11.19□□□□□ -0.62
TMEM88-201ENST00000301599 HIST1H4GQ99525 98 aa11.19□□□□□ -0.62
TMEM88-201ENST00000301599 TNXBP22105 4242 aa11.19□□□□□ -0.62
TMEM88-201ENST00000301599 NDUFC2-KCTD14E9PQ53 114 aa11.18□□□□□ -0.62
TMEM88-201ENST00000301599 ZNF815PA8K554 130 aa11.17□□□□□ -0.62
TMEM88-201ENST00000301599 CKS1BP61024 79 aa11.17□□□□□ -0.62
TMEM88-201ENST00000301599 HERVK_113P63121 156 aa11.17□□□□□ -0.62
TMEM88-201ENST00000301599 TMEM170BQ5T4T1 132 aa11.17□□□□□ -0.62
TMEM88-201ENST00000301599 SCGB1D4Q6XE38 83 aa11.17□□□□□ -0.62
TMEM88-201ENST00000301599 FAM19A5Q7Z5A7 132 aaPredicted RBP11.17□□□□□ -0.62
TMEM88-201ENST00000301599 TOMM7Q9P0U1 55 aa11.17□□□□□ -0.62
TMEM88-201ENST00000301599 IGLV7-43P04211 117 aa11.16□□□□□ -0.62
TMEM88-201ENST00000301599 LGALS3P17931 250 aaKnown RBP11.16□□□□□ -0.62
TMEM88-201ENST00000301599 GEMIN7Q9H840 131 aaKnown RBP11.16□□□□□ -0.62
TMEM88-201ENST00000301599 TP73-AS1Q9UF72 201 aa11.16□□□□□ -0.62
TMEM88-201ENST00000301599 UBR4Q5T4S7 5183 aa11.16□□□□□ -0.62
TMEM88-201ENST00000301599 GAGE10A6NGK3 116 aa11.15□□□□□ -0.62
TMEM88-201ENST00000301599 LEPROTO15243 131 aa11.15□□□□□ -0.62
TMEM88-201ENST00000301599 FABP2P12104 132 aa11.15□□□□□ -0.62
TMEM88-201ENST00000301599 Q8IZM0 81 aa11.15□□□□□ -0.62
TMEM88-201ENST00000301599 SPANXB1Q9NS25 103 aaPredicted RBP11.15□□□□□ -0.62
TMEM88-201ENST00000301599 DIRC1Q969H9 104 aa11.14□□□□□ -0.63
TMEM88-201ENST00000301599 CDKN2A-AS1Q9UH64 79 aa11.14□□□□□ -0.63
TMEM88-201ENST00000301599 C9orf129Q5T035 196 aaKnown RBP11.13□□□□□ -0.63
TMEM88-201ENST00000301599 KRTAP7-1Q8IUC3 87 aa11.13□□□□□ -0.63
TMEM88-201ENST00000301599 TINCRA0A1B0GVN0 87 aa11.12□□□□□ -0.63
TMEM88-201ENST00000301599 J3QQQ9 107 aa11.12□□□□□ -0.63
TMEM88-201ENST00000301599 M0QXV9 152 aa11.12□□□□□ -0.63
TMEM88-201ENST00000301599 UBE2BP63146 152 aa11.12□□□□□ -0.63
TMEM88-201ENST00000301599 LYRM7Q5U5X0 104 aa11.12□□□□□ -0.63
TMEM88-201ENST00000301599 KRTAP11-1Q8IUC1 163 aa11.12□□□□□ -0.63
TMEM88-201ENST00000301599 A0A1W2PPM0 123 aa11.11□□□□□ -0.63
TMEM88-201ENST00000301599 TMEM223A0PJW6 202 aa11.11□□□□□ -0.63
TMEM88-201ENST00000301599 A0A1B0GWB2 263 aa11.1□□□□□ -0.63
TMEM88-201ENST00000301599 H3BUT2 72 aa11.1□□□□□ -0.63
TMEM88-201ENST00000301599 K7EP34 96 aa11.1□□□□□ -0.63
TMEM88-201ENST00000301599 FXYD2P54710 66 aa11.09□□□□□ -0.63
TMEM88-201ENST00000301599 TTTY13Q9BZ97 58 aa11.09□□□□□ -0.63
TMEM88-201ENST00000301599 NHP2Q9NX24 153 aaKnown RBP11.09□□□□□ -0.63
TMEM88-201ENST00000301599 TMEM238C9JI98 176 aa11.08□□□□□ -0.64
TMEM88-201ENST00000301599 H0Y9J4 135 aa11.08□□□□□ -0.64
TMEM88-201ENST00000301599 ZNF22P17026 224 aaPredicted RBP11.08□□□□□ -0.64
TMEM88-201ENST00000301599 Q6ZVH6 145 aa11.08□□□□□ -0.64
TMEM88-201ENST00000301599 CXCL5P42830 114 aa11.07□□□□□ -0.64
TMEM88-201ENST00000301599 RAB37Q96AX2 223 aa11.06□□□□□ -0.64
TMEM88-201ENST00000301599 XAGE1AQ9HD64 81 aa11.06□□□□□ -0.64
TMEM88-201ENST00000301599 C22orf24Q9Y442 160 aa11.06□□□□□ -0.64
TMEM88-201ENST00000301599 SPCS1Q9Y6A9 102 aa11.06□□□□□ -0.64
TMEM88-201ENST00000301599 RPL24P83731 157 aaKnown RBP11.05□□□□□ -0.64
TMEM88-201ENST00000301599 COPS9Q8WXC6 57 aa11.05□□□□□ -0.64
TMEM88-201ENST00000301599 IGLV5-45A0A087WSX0 123 aa11.04□□□□□ -0.64
TMEM88-201ENST00000301599 SMIM1B2RUZ4 78 aa11.04□□□□□ -0.64
TMEM88-201ENST00000301599 PRR26Q8N8Z3 221 aa11.04□□□□□ -0.64
TMEM88-201ENST00000301599 COX7B2Q8TF08 81 aa11.04□□□□□ -0.64
TMEM88-201ENST00000301599 IGLV1-50A0A075B6I6 118 aa11.01□□□□□ -0.65
TMEM88-201ENST00000301599 K7ERU9 68 aa11.01□□□□□ -0.65
TMEM88-201ENST00000301599 TIMM17BO60830 172 aa11.01□□□□□ -0.65
TMEM88-201ENST00000301599 LRP2P98164 4655 aa11.01□□□□□ -0.65
TMEM88-201ENST00000301599 A0A0J9YXY3 114 aa10.99□□□□□ -0.65
TMEM88-201ENST00000301599 F8W1H4 67 aa10.99□□□□□ -0.65
TMEM88-201ENST00000301599 ZNF861PO60384 105 aa10.99□□□□□ -0.65
TMEM88-201ENST00000301599 SPINK8P0C7L1 97 aa10.99□□□□□ -0.65
TMEM88-201ENST00000301599 CBY1Q9Y3M2 126 aa10.99□□□□□ -0.65
TMEM88-201ENST00000301599 IFITM1P13164 125 aa10.98□□□□□ -0.65
TMEM88-201ENST00000301599 MRPL55Q7Z7F7 128 aaKnown RBP10.98□□□□□ -0.65
TMEM88-201ENST00000301599 TRBV20-1A0A075B6N2 111 aa10.97□□□□□ -0.65
TMEM88-201ENST00000301599 KRTAP1-4P0C5Y4 121 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms